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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0036800 |
| Transcript ID | LotjaGi4g1v0036800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ABC transporter G family member; TAIR: AT1G17840.1 white-brown complex-like protein; Swiss-Prot: sp|Q8RXN0|AB11G_ARATH ABC transporter G family member 11; TrEMBL-Plants: tr|G7JCQ3|G7JCQ3_MEDTR White-brown-complex ABC transporter family protein, putative; Found in the gene: LotjaGi4g1v0036800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:4476061..4481074) extracted from Lotus japonicus Gifu genome v1.2.
ATTAGCTGCACTTTTTTTCTTATATGCAAATTGCATTCATGGAATGAAATTTAATAATTACATTAAAGAAAGAAAAATTA CTTGGAGTGATGATATAGAGTGGATGAAGAGATGGTAAAGAGTTACTTAAAAGAAAGAAAAATTTAATAATTACATTAAA AATTTATTAATATTTTTTTACAAGAGGAAATATAATAGAAAAAAGGCTTAATTACAGTTTGGGTCCCTGATGTTTCATAA ATGTGCGATATATACCCCCCGTGTTTAAAATGTGCGGTCAAGCTCCCTTATGTATCTAAAGTGTGACGTTGATGCCTTTT CGTCAATATCCATTTGGTTCTGTTAGTTGACCAAACGATTCTCCCTTCATTAACTGACGTGGCGTCTACGTGTAATAACA ATTCATTTAAAAAAAAATTACGAAAATCATTACCTTCCTCAAGTTTTCCCCAAATTTTAACCCTACCTGATTCCCCCAAT TTTTCCCCCAATTTGAACCCTAATTAGAACGAAGAACAGGGAGAGTGAGAGGGAAAGAAATCTGTAGGAGAAGAACTGGA TGAGGAAAGAGAGGAGGGAGCACGAGATGAACGAAACCTCAAATCGGTGAGAACAGAAAAAGGAAGAGCTCGGGATTTTC TTCAAAATCGGTAACTTAGAAACTGCTCCTCATCGTCGTTCGTTCATCGTCTCTGCGCCGCTCGCATCATCGCCGTTCTT CTTCCCCCCTTTTTTGCCTTCGGTTCTATATGATTTTTGGTCTGGGGTTTGCATCAAGGTTTGGTATTAGATCTGGGTTC GAGGTATGGTGGTAGGGTGAGCTGATATGGGTTAATGTTGTTAATGATCTGTTCTCTGTGTCTTAAGTGTGCTGAAATTA GAAAATAGAAATCAATTTGGAGATTACCTAGAACTAACATTCTTGGTTGGGTCTGCTGAATTTATTGCTTGTTACCTTTG ATAACTGGGTTCGGGAATGGTGGGGAATGGAATTGATACAATCTTGAATATGGCTTGGTGTGGGATATCGCGGAACATGA TTTGTGGTCATTAGCTGGTGCTGTTGGGATTCACATGGCTAGGTGTTTGTAGCTATGATATGAATTTTTCGGTTTAGAAA ATATGTGCATGGGAAAGCATGGAAGCAAACCAATTCTTCAGGGTCTAACTGGTTATGCCAAGCCAGGGAAGCTCTTGGCT ATCATGGGACCCTCTGGTTGTGGAAAATCTACACTTCTTCATGCTTTAGCAGGTATAGTATACATTTAAATAATCATGTT TCTTGGAGTAGTACTTTTTAAAATTACTACTTGAAAATGTTTAAAATTACTTATACATTTAAAATTGTTATCTTTTTGGT ACAAGAGTTAAAAAGAAAAACCACATCAGCAGCACAACAAAGAAAACCATAGCAGTCCCTAACACATCAGTAAGGGGAAA CGGTTCCAAGTCCACATGAGGATCCAGAAGCACAATAAAGCTCTGCTGCCTAGCCTGCCTTAGAACGGAATTCAAACACA ATCCAATTGTTACTTGAATTCGAAAATGAAATCTTTTGTTTTCAAAACTTCATGGCATATGTCTTTTTAATAATCAGTTT AATGAATTTCTTTAAAATATTAAGAGTGTGATTATTTCAGTTTTTTTATATTACTTTTAAACCTAAAAAAGCTTTTTTTT TTAAATTTCCAATATATGTTTCAATTTTTTGAAAAATCGTTATTTTTTTTGCTTCATTGGAAAACAAAAAATCATTATTT TTTTGGTCTTGACCAAGGTATCCCCACAGCCGTGAGACTAATCCCTCGCCCCACGGTCAGCGCACAACCGACCCCTCAAA AACCCATAGAGGAACAAAACCAACAAGACCTATACAACCAGAGACACAAAACCCCAACAAAATCAGACACAACAAAACCC AAACAAACCAAAGGGGCAAACCAGAAGAACCATTGTGGGAACGACCGGGAACGACCGCCAAAAAGAAGAAACAACCACTA CTAAGACAGCCCACGAGCACGAATTTGGACCGTTATCTAGTTCAGAGCGGTCTCATCTGTACAATGGTACCTCATTCCCA AATATAACCCCATCGAAAGGGCACTCCTCGCCCTAGTCATGACACCACAAGGCTCTGAAAGCTCTGCCGATAAAATCATC AGCTGATTACCTTCATTAGCTTCCAATGATCCAGAGTCCTCAGCTAACAGAGAACCACTAGCAACCCTACCAAGCTCCTT CACGTTTCCACCTCTCTTCTCATACTTCCTTGGTCTTCCCCTAGGCCTGCGACATATGGCTCCTTCTTAGTTGCACACCC CCCTTAAGCTTCTTAGGACGACCACACCCTCTTTTAGGAACCCCACTAATATCCATACCCATGGGGAGAAGCGCCACCTC GCCCTCCCCACATTGACTCAATGACTCCCGCTCGTAAAAAGTAAATCTGTCTGATTGGTACAAGACAAAGGCTCATCAAC ACTCTTGCTCAAGAATGGAACCAGTTGCGCCACAGAAGGATCCTTCAAAGGAAAGGGGGGGGGGGAGGCACACCCAAAGC TGGAGGAGCTTTAAGAAAGCTAAAGATGACACATGACCCACAAACAGAGAAAGACCACGAAAATCCTCACGTCCCACCTC AAAAGAAGCATCTAAAAAGTTTTTTCGAGCTAATCATGTCCCTTAACATTTAATTAAAATTATGCAAAATTAGTTCCTCT CTCAATTTTCACATGAATAAAATCATTAAATCATCATACCTTTTCAAATATTTAGGGTGTACGGATTTTTTTGGTATTTA AATATTAGTAGGATTTGAACTCAAGACTTTGAAAATTTTAATTCAACAAGTATCATTTAGGTTATCCATACCAATAAGAT GTACGAATTTGATATACAATACAATTTTAGAAGTTTTAAAATATTTGAAATTTGGGTTCAAAAATTAAATATTTCATATA TATATATATATATATTTGCTACATGACAAAAATGAATTTTGTGTAGTTTATTTTTTACATTAATTTAGCAATTAAAATAT GACATGATTATATATGTAATTAAATTTGTAATTTTGTTCAAATAAATGTGTTTTGTTGTGCAATTACCAAACACAATACG TAAAATAATAGTTTGAATTTATGTCATATTAATTTTAAAGATTTGATGTCACTCAATTTACTTAAATAAAAAATCAAATT TTTCAACAATCAAAAAATTTAATTGGTTGATGGTGTAAAAAACTTTAGTGTATCAAACTTTTTCTCTATATATTATGTCC CCTTCTGTTTAGTCGTCGGTTTCGTTATTAAATGTTACCCATGCTCTTGTACTAATTCTATTCCACCAATAAAATCGTGC GGTGGAGAATTTGAAATGCACCTTAAATAACAGTAAATAATATGGTTGAATATTCAACCTACGAATGGGAAGTAAAGTTA AATCACACGTCCATAATTCAGGGGCAGGTCCCCTAGTATAAGTGTCGTAGGACATACTATGTTGACATCTAATTACAAAA TTCCACAAATATCATTGTCCAAAAATGTATTCCGTTCTAATTAGATTCATTGTAATTGTTATTCTTATCTAGTTCCACTT TCCTTTTTTATATGCACTTGAAAGTGCAATGTTAACGCACTTAAAAGGGATAGATGGAACCATATGAGAGGGAGGTGGGA AAAACAATTACCTAAATTCATTTATCAAAAAGGTCTGTGTGTAAAATACTAAAATTTGAGAGGGAAAAACACTTATTCTT TCTAATAATGCTAGTTTAATTCTTCATCAGATTCCAAATTAAATGATGATGATATGAATTCATATACATTTCAGGTAGAT TAAGCACAAACACAAAACAAACAGGGGAGATTCTGATCAATGGTAACAAACAAGCTCTGGCTTATGGAACCTCGGTATAC AGATCGTAAATTCTTCAACAAAAAACAAATTGAGAGTACCCATATGAATGATCAATTAACTATTTCTTATATGAATCTAT GTGATTGTGACCACAGGCATATGTGACACAAGATGATACCTTAATGACAACCTTAACAGTTAGAGAAGCAGTGCATTATT CAGCTAAACTTCAGTTGCCTGATTCCCTTTCCAAGGAAGAGAAGAAAGAGAGAGCAGAGTTCACAATCAGAGAAATGGGA CTCCAAGGTGTCGTTAACACAAGAATTGGAGGTTGGGGAATTAAAGGCATTAACGGCGGTAAGAAAAGGCGACTGAGCAT TTGCATAGAGATCCTAACTCGCCCTAAACTTCTGTTTCTGGATGAACCAACTAGTGGATTGGATAGTGCAGCTTCCTACT ATGTCATGAAAAGAATTTCTACACTGGATAAAAAAGATGGCATTCAGAGGACTATTATTGCCTCAATTGATCAGCCTAGT TCTGAAGTTTTTCAACTCTTCCACAACCTTTGCCTTCTATCTTCAGGGAGTACAGTTTATTTTGGACCTGCTTCTGCTGC ATCTGAGGTTAGGAACTAGCCCCATGTTTTAGGGATTTGGGTTACTTGCAGTCAGGAATACCCTACATTCACGAATTCAC GATATTTGAATTGTACAATTAAGATTCGTTGGCTCCTATCTTTCATCTAGATAGGACGACAGACATGTCAGAAAATTTAA TTCGTTCGGTCAAGATCGAACGATTTAGATCCAGTGACTACATGAACGTCGGGATTCTCGACTTCAGGAAATCCATTTCA ATTTTCCATCATCAGAAATTTTTATATTTGTTTCTAAGTTCTAACTATGATTTTCAACTTCTAACTCTGCGTTCATTTTG ATGCAGTTTTTCGATTCAAATGGTTTTCCTTGTCCTACCCTCCAGAATCCATCTGATCATTTGCTTAAAACTATAAACAA GGATTTTGAGCAGGTTAGCTGACCATATGCATTCATGTTTTCTTCATGATTTCATTATATTCTTGATCGATGAGTGTAAT AGTGTATGTTTGGATATAAGTGAAACATGAATGGACTCTCATCCTACTTCATAA
CDS sequence (LotjaGi4g1v0036800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGCATGGGAAAGCATGGAAGCAAACCAATTCTTCAGGGTCTAACTGGTTATGCCAAGCCAGGGAAGCTCTTGGCTAT CATGGGACCCTCTGGTTGTGGAAAATCTACACTTCTTCATGCTTTAGCAGGTAGATTAAGCACAAACACAAAACAAACAG GGGAGATTCTGATCAATGGTAACAAACAAGCTCTGGCTTATGGAACCTCGGCATATGTGACACAAGATGATACCTTAATG ACAACCTTAACAGTTAGAGAAGCAGTGCATTATTCAGCTAAACTTCAGTTGCCTGATTCCCTTTCCAAGGAAGAGAAGAA AGAGAGAGCAGAGTTCACAATCAGAGAAATGGGACTCCAAGGTGTCGTTAACACAAGAATTGGAGGTTGGGGAATTAAAG GCATTAACGGCGGTAAGAAAAGGCGACTGAGCATTTGCATAGAGATCCTAACTCGCCCTAAACTTCTGTTTCTGGATGAA CCAACTAGTGGATTGGATAGTGCAGCTTCCTACTATGTCATGAAAAGAATTTCTACACTGGATAAAAAAGATGGCATTCA GAGGACTATTATTGCCTCAATTGATCAGCCTAGTTCTGAAGTTTTTCAACTCTTCCACAACCTTTGCCTTCTATCTTCAG GGAGTACAGTTTATTTTGGACCTGCTTCTGCTGCATCTGAGTTTTTCGATTCAAATGGTTTTCCTTGTCCTACCCTCCAG AATCCATCTGATCATTTGCTTAAAACTATAAACAAGGATTTTGAGCAGGTTAGCTGA
Protein sequence (LotjaGi4g1v0036800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MCMGKHGSKPILQGLTGYAKPGKLLAIMGPSGCGKSTLLHALAGRLSTNTKQTGEILINGNKQALAYGTSAYVTQDDTLM TTLTVREAVHYSAKLQLPDSLSKEEKKERAEFTIREMGLQGVVNTRIGGWGIKGINGGKKRRLSICIEILTRPKLLFLDE PTSGLDSAASYYVMKRISTLDKKDGIQRTIIASIDQPSSEVFQLFHNLCLLSSGSTVYFGPASAASEFFDSNGFPCPTLQ NPSDHLLKTINKDFEQVS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 238 | 238 | 14.973 | ||
| Gene3D | 4 | 232 | 229 | 7.0E-49 | – | |
| PANTHER | 5 | 253 | 249 | 9.5E-139 | – | |
| PANTHER | 5 | 253 | 249 | 9.5E-139 | – | |
| SUPERFAMILY | 7 | 230 | 224 | 1.29E-38 | ||
| Pfam | 13 | 163 | 151 | 1.2E-24 | ||
| SMART | 21 | 210 | 190 | 2.9E-12 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. |
Expression pattern of LotjaGi4g1v0036800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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