Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR003593
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 1047 results. Now displaying 1 of 21 with 50 rows per page. This search has taken 6.602s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0000209.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356506581|ref|XP_003522058.1| chr0 65706 71152 +
2 domain predictions
 –
Lj0g3v0014269.1
n.a. PREDICTED: ABC transporter I family member 19-like [Cicer arietinum] gi|502114917|ref|XP_004495081.1| chr0 5463570 5468553 -
2 domain predictions
 –
Lj0g3v0033249.1
n.a. PREDICTED: ABC transporter A family member 2-like [Cicer arietinum] gi|502126773|ref|XP_004499431.1| chr0 10524457 10530928 -
2 domain predictions
 –
Lj0g3v0041889.1
n.a. PREDICTED: ABC transporter C family member 12-like [Glycine max] gi|356517706|ref|XP_003527527.1| chr0 13755005 13768595 +
2 domain predictions
 –
Lj0g3v0041899.1
n.a. PREDICTED: ABC transporter C family member 2-like [Glycine max] gi|356508251|ref|XP_003522872.1| chr0 13770401 13778552 +
2 domain predictions
 –
Lj0g3v0045059.1
n.a. PREDICTED: TMV resistance protein N-like [Cicer arietinum] gi|502091202|ref|XP_004489475.1| chr0 14809885 14814337 +
2 domain predictions
 –
Lj0g3v0048519.1
n.a. PREDICTED: ABC transporter B family member 28-like [Glycine max] gi|356530907|ref|XP_003534020.1| chr0 16341719 16348251 -
2 domain predictions
 –
Lj0g3v0048519.2
n.a. PREDICTED: ABC transporter B family member 28-like [Cicer arietinum] gi|502165769|ref|XP_004513684.1| chr0 16341719 16348251 -
2 domain predictions
 –
Lj0g3v0058969.1
n.a. PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like [Fragaria vesca subsp]. vesca] gi|470128173|ref|XP_004300022.1| chr0 19474318 19479241 +
2 domain predictions
 –
Lj0g3v0061699.1
n.a. PREDICTED: lon protease homolog 2, peroxisomal-like [Glycine max] gi|356563427|ref|XP_003549964.1| chr0 20680891 20689343 -
2 domain predictions
 –
Lj0g3v0064119.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356561802|ref|XP_003549167.1| chr0 22003038 22014728 -
2 domain predictions
 –
Lj0g3v0064119.2
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356561802|ref|XP_003549167.1| chr0 22003038 22014728 -
2 domain predictions
 –
Lj0g3v0064119.3
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356561802|ref|XP_003549167.1| chr0 22003038 22014728 -
2 domain predictions
 –
Lj0g3v0065079.1
n.a. ABC transporter G family member [Medicago truncatula] gi|357443805|ref|XP_003592180.1| chr0 22615411 22618188 +
2 domain predictions
 –
Lj0g3v0066079.1
n.a. PREDICTED: ABC transporter B family member 4-like [Glycine max] gi|356499544|ref|XP_003518599.1| chr0 23131074 23138102 +
2 domain predictions
 –
Lj0g3v0066219.1
n.a. PREDICTED: ABC transporter F family member 4-like isoform X1 [Cicer arietinum] gi|502102241|ref|XP_004492011.1| chr0 23235805 23238545 -
2 domain predictions
 –
Lj0g3v0068559.1
n.a. n.a. chr0 24564625 24570218 +
2 domain predictions
 –
Lj0g3v0070149.1
n.a. PREDICTED: ABC transporter C family member 10-like [Glycine max] gi|356561462|ref|XP_003549000.1| chr0 25500628 25508114 -
2 domain predictions
 –
Lj0g3v0077349.1
n.a. PREDICTED: ATP-dependent zinc metalloprotease FTSH 9, chloroplastic-like [Glycine max] gi|356553056|ref|XP_003544874.1| chr0 29661584 29669624 +
2 domain predictions
 –
Lj0g3v0080329.1
n.a. PREDICTED: ABC transporter G family member 11-like [Glycine max] gi|356524824|ref|XP_003531028.1| chr0 31154944 31156930 +
2 domain predictions
 –
Lj0g3v0080819.1
n.a. P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 2 [Theobroma cacao] gi|508709082|gb|EOY00979.1| chr0 31383480 31393895 -
2 domain predictions
 –
Lj0g3v0080819.2
n.a. phosphoribulokinase/uridine kinase domain protein [Arabidopsis thaliana] gi|334184093|ref|NP_178255.5| chr0 31383480 31393895 -
2 domain predictions
 –
Lj0g3v0085309.1
n.a. PREDICTED: DNA replication licensing factor mcm4-B-like [Glycine max] gi|356538731|ref|XP_003537854.1| chr0 34113337 34118635 -
2 domain predictions
 –
Lj0g3v0085309.2
n.a. PREDICTED: DNA replication licensing factor mcm4-B-like [Glycine max] gi|356538731|ref|XP_003537854.1| chr0 34113755 34118635 -
2 domain predictions
 –
Lj0g3v0088939.1
n.a. PREDICTED: ABC transporter C family member 10-like [Glycine max] gi|356561462|ref|XP_003549000.1| chr0 36412676 36417842 -
2 domain predictions
 –
Lj0g3v0095249.1
n.a. PREDICTED: TMV resistance protein N-like [Cicer arietinum] gi|502156468|ref|XP_004510489.1| chr0 40108382 40114953 -
2 domain predictions
 –
Lj0g3v0102289.1
n.a. PREDICTED: replication factor C subunit 3-like [Glycine max] gi|356511754|ref|XP_003524588.1| chr0 43507085 43512829 +
2 domain predictions
 –
Lj0g3v0104279.1
n.a. PREDICTED: ATP-dependent zinc metalloprotease FTSH 6, chloroplastic-like [Glycine max] gi|356568662|ref|XP_003552529.1| chr0 44583675 44585230 +
2 domain predictions
 –
Lj0g3v0105229.1
n.a. Non-intrinsic ABC protein 10 [Theobroma cacao] gi|508782333|gb|EOY29589.1| chr0 45100970 45102553 -
2 domain predictions
 –
Lj0g3v0122529.1
n.a. PREDICTED: 26S proteasome regulatory subunit 4 homolog A-like [Glycine max] gi|356505102|ref|XP_003521331.1| chr0 54724839 54728135 +
2 domain predictions
 –
Lj0g3v0125859.1
n.a. PREDICTED: cell division cycle protein 48 homolog [Cicer arietinum] gi|502121999|ref|XP_004497529.1| chr0 56582836 56586596 -
2 domain predictions
 –
Lj0g3v0131509.2
n.a. PREDICTED: cell division protein ftsY homolog [Glycine max] gi|356504906|ref|XP_003521235.1| chr0 59826316 59832174 -
2 domain predictions
 –
Lj0g3v0132469.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356497765|ref|XP_003517729.1| chr0 60457324 60461356 -
2 domain predictions
 –
Lj0g3v0132469.2
n.a. n.a. chr0 60457324 60461356 -
2 domain predictions
 –
Lj0g3v0133229.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356561802|ref|XP_003549167.1| chr0 60912920 60921656 +
2 domain predictions
 –
Lj0g3v0139779.1
n.a. PREDICTED: cell division control protein 48 homolog C-like [Cicer arietinum] gi|502123616|ref|XP_004498190.1| chr0 64041624 64047127 +
2 domain predictions
 –
Lj0g3v0162289.1
n.a. TIR-NBS-LRR RCT1-like resistance protein [Medicago sativa] gi|193584702|gb|ACF19651.1| chr0 76512312 76513776 -
2 domain predictions
 –
Lj0g3v0166219.1
n.a. F-box protein [Medicago truncatula] gi|357504105|ref|XP_003622341.1| chr0 79052711 79057831 +
2 domain predictions
 –
Lj0g3v0167069.1
n.a. Disease resistance-like protein [Medicago truncatula] gi|357486563|ref|XP_003613569.1| chr0 79417979 79420367 -
2 domain predictions
 –
Lj0g3v0183909.1
n.a. PREDICTED: lon protease homolog 1, mitochondrial-like [Glycine max] gi|356533540|ref|XP_003535321.1| chr0 89371038 89383274 +
2 domain predictions
 –
Lj0g3v0188219.1
n.a. PREDICTED: ABC transporter C family member 3-like [Glycine max] gi|356524338|ref|XP_003530786.1| chr0 91905530 91907730 -
2 domain predictions
 –
Lj0g3v0188449.1
n.a. PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Glycine max] gi|356570357|ref|XP_003553356.1| chr0 92097504 92100148 -
2 domain predictions
 –
Lj0g3v0195169.1
n.a. PREDICTED: mitochondrial chaperone BCS1-like [Glycine max] gi|356571258|ref|XP_003553796.1| chr0 95220144 95222275 -
2 domain predictions
 –
Lj0g3v0210949.1
n.a. PREDICTED: probable ATP-dependent RNA helicase DHR1-like [Glycine max] gi|356506353|ref|XP_003521949.1| chr0 106172230 106176681 +
2 domain predictions
 –
Lj0g3v0211629.1
n.a. PREDICTED: ABC transporter C family member 12-like [Glycine max] gi|356517706|ref|XP_003527527.1| chr0 106650389 106656979 +
2 domain predictions
 –
Lj0g3v0222689.1
n.a. PREDICTED: ABC transporter C family member 10-like [Cicer arietinum] gi|502119079|ref|XP_004496497.1| chr0 114613500 114618750 -
2 domain predictions
 –
Lj0g3v0223409.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356570335|ref|XP_003553345.1| chr0 115180723 115187482 +
2 domain predictions
 –
Lj0g3v0238769.1
n.a. PREDICTED: peroxisomal biogenesis factor 6-like, partial [Cucumis sativus] gi|449498547|ref|XP_004160567.1| chr0 123902037 123904301 -
2 domain predictions
 –
Lj0g3v0241969.1
n.a. PREDICTED: ABC transporter G family member 21-like [Cicer arietinum] gi|502118333|ref|XP_004496215.1| chr0 125539178 125544861 -
2 domain predictions
 –
Lj0g3v0246249.2
n.a. PREDICTED: LOW QUALITY PROTEIN: ABC transporter C family member 13-like [Cicer arietinum] gi|502080578|ref|XP_004486609.1| chr0 127549679 127553617 +
2 domain predictions
 –