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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0042700 |
| Transcript ID | LotjaGi4g1v0042700.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Major facilitator superfamily transporter; TAIR: AT5G64500.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q9FLG8|SPNS2_ARATH Probable sphingolipid transporter spinster homolog 2; TrEMBL-Plants: tr|I1KL79|I1KL79_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0042700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:5043489..5050596) extracted from Lotus japonicus Gifu genome v1.2.
AAAAGATAAACCAAAATAACAGAGTGAGAATGTTAATGTTAAAGGAATCAAACATAGATACTTTTCGTTGTTACAGCAAA CACAACCTGGATTTTCCATCAAAATCTCACCTATAAATTGCAAAATTACAATTTCACACCAATTCAATTTTCTTCCAGAG AAGAAGAATCAAAGAGAAGAAGAAGAAGAAACAGAGCTTAAGCTTTTGTCTCTGTGGAGGAACAAGAGCTTAATGCTTAT TGTTGTTCTTCTTAATCTTCGAGTCTTGCTTTGATTTGATTCTTCCAACTGCCATTCAACTTCAATTTTCAATTTTCAAT AAAAGGGTCATTGTCAAATTTAAAAAAGATTATTTTTTTATTATAATATATTGAGATGGCACAACATGAAGCAAAACCTG AGACTTTGTCTTCTTCCCCTAAACCTGAGCCTTCTGCGGAGCCAGACATGGCTACCAAGTCCACTATGATTCCGGCAACT TCATGGTTTACACCCAAGAGGTAATTGTGTTTTTTTCGCCTTTCTTTTGTTGCTGGATCTGTGATGGAAAAACTAGAAAT GTTTGAATTTTTGTGATTTAGGTTTGTGTTTTGGAGGGAGAGTAATTTTGGGTATTTTTTTGTTTCCCCCAATTTTGTGT GGGGAACAATTTTTTTCAATGAACAGTTCTGGGTTTTTTCTTTCAATGTTGGAATTGAATTTGTGTTGTTGGGTGTTATA TTGTTTTGAATTTCATTAATGTAGGTCAAGAAATTTAAGAATTCAATGTGTTTTGTGGTTGGAAGATTCTTAATCTGTTT TTTTTTTTATGTTGTTTTGTAGGTTACTGGCTATATTTTGTGTGATTAACATGTTAAACTATTTGGACCGAGGAGCGATA GCGAGCAATGGGGTTAATGGAAGTCGTGGAACTTGCACAAAAGGTGGTACCTGCACGTCTGGAACCGGAATACAGTATGT CTAAGATACACTAGGATCTTGTACTTAAGTTGTGAAAATGATTCTGGTTGTTTTCGCATTTAATTTTGATCGGACCGAGC TTGAAGATTTAAGTGGTTGGGTTTCAGCTTTCAAAATGTCTTGACTTTTGATGACATGGTTGGGTTTCAAAATGTTTCTG TTACACACAGTGACATGTATTACATGGTTCTCAAACTATAAGAACATTTAATGCATCACTAACAAAAACCAATTTATCAA AGTAATACCTTTGATATTTTATTGCCTTTCCTCTTTACAGAACAAGAATAGAGGATGCTGAGGCAGCTTATATTAATTAG AGAGATATGACCATTTTCTGAATTGAAAAAGCACTCTTAGAATCTGTTTGGTTTACAGTTAGAAAGTTTGAAAACTGTAA AATAACACATCCCGGGACACTTTTTATTGAATTAGCTCAGGATGTGTTATTTTCATATTTTCTAATGGTAAACGAATCGG GCTCTAAGTTACTATGATAAAGAGAGAAAAAAATTGAGACCTTGGTGATAAACATATTTTTCTGTTACCTAATTTTATCA GTGCTTCTCAATAGAAGTGTACCACCTAGATGGAGAAGTCTATTTATACTCTGCAAGATAACGATTACTCTTGCCTGTAT GAGCTTTTCCTTGTGTTTGATGCCAAGACCTATTGTGCTGTATGGAGTGCTAAATTTTCAAAACTCATTAGTAGTTTTTG ACAATAAAGTTTTCTACTTCCGTGTAGGGGTGATTTCAACTTGAACAATTTTGAGGATGGAGTTCTATCATCTGCATTTA TGGTTGGACTTCTTATTGCTTCTCCAATATTCGCATCTCTAGCAAAGAGGTAATGATTAATGACACTTTTTGGAACGAGT TATTTTATGGCAGCTTTCATGCTTTGTACTCTGTTTGGCCATGATGTATCATGTATGTGAATGTCCTTTGGGCATTATGG CAATCAAAATAAATCATCTACTTGGGACATGGAGTTTTCTCCTATCCAGCCAACTTTTTGCTCATTCTGCTTTAGGTGCA GTTATGCTGGCAATCGCTGGTTTTCGTATTCTCCATTTGAGTACATGCTTTCATGGTTAAATGATTAACTTAGTGATACA TATGGCATGCACATAAAGTTTCAGCATGAATGCCTCTAAGATTTTTAGTTCAGTGACTACTCTTTTGCTCATGGGGTTCT TTGTGCTCTATTTAGTTTAACTATCGAACCTCTCAATGCTTCAGAATTATATAAACTTTTAAACAATCACTGATCTATTA TATTTGTCAGAATACAACACATTCTTCACATGTGCATTGTATCTATATTTCACATGGGCATCAGTATAGGAACTTGTCCG CAGGAACTAGAAAATTGTGTATGTAATTAGTATGCTCATGTACCTCTTACGTACCTATTAATAATCCATTAATTAGAATT TTCAACCACCTCTGTCATGTACATCCACATACAGTTTACATGATCTATAATTGCTATCATTAACTTATAAATATTGATTG TTACGTAATTCCTATATTCTGCAGTGTAAACCCTTTTAGACTTATTGGAGTTGGATTGTCAGTTTGGACTGGTGCAACCT TTTGTTGTGGTTTTTCTTTCAATTTCTGGACCATTGCACTCTGTCGAATGTAAGTGTTTTCTTCTGTTATTCTTCAAGCT CTATGGTTTTTGTATTGATTACTTAAATATCAGCACAAAATGTAAGAATAACCATATTTGCTTCTTTTTGCTTTCATTAT TCTCTGTAGGCTTGTTGGTGTTGGTGAGGCTTCATTTATAAGTCTTGCTGCTCCTTTCATTGATGACAATGCCCCGGTTT CACAGGTACCAGTATTGAGAAAATGAAAGCTACCATTGTATAGTAACAAACTTACTCAAACTCTTTTAGTGTTATTGAAT GCTATTAAGCATTAATGCAAAATTTTAGCTCTAATCAGTGAGGTGACTTAGCCTACATGAGTTGAGATAGTTGCTTCTTT TCAACATTTTAATGGTTTAAAGATATAATTTGAAACTTACTGATGTACTTGTACCTTTCTTGGTAGTTGGAATGTTATAT GTCATTGTGATTGCTGTCTGTTTTCTTTATGGTGCAAACCTTTCTTATAATGGCTTATGTATCAGAAAACGGCGTGGCTT GCTATATTTTACATGTGCATACCTGCTGGATATGCAGTGGGCTATATCTATGGTGGTTTGGTAAGTTTTCCTTTGGTTTT AATACAAGTTTAAATTACAGTAGTAATATATGCAATGTAGGTGTGAAAGAAAGATATATTTTTTGAAATTTAATGATAAG TAAAATTTGTTTTAGATAAAGAAAATCTTAAACAGGGACGTAATAAGAGTAGAAATTGGTTAAATTGTAAGTTTATTATA AATTTGGAATGATAGTTTTCTCCTCCGTTCTGCTATCAATCACAATGAATGAATAAAAACCTAATGTTGTCTTGTAGGTA GAGAAAAACTTGGATGACAATTCAGGAAATTCCTTTTTTTTTTTTTAAATTATCAGTACTTTAGAAATAATCAATATGTC TATATTGCTTTATTTTCTTGTTTTTAAAATTGCCCTCTCTAATTTGATCTTTTTATTTTTTAAAAATAGGTAGGAAGTCA TTTTGGTTGGCGTTGGGCATTTTTTACGGAGGCTGTATTGATGCTTCCATTTGCTATTTTGGGATTTGTTATGAAGCCTT TGCAGTTGAAAGGTGCACATTTTTGTCATGCATTAATTGTTGCAGTTCCCAAATATTGTTTTCCATCTCTAAACTACCTG TGGATCCAGGTTTTGTCCCTGCTGATTCTAAGAAGGCGCTGACATCTGAGACAGTAGGGTCTGAAGTTCAAGGTACCATT ATGTTTTACAGTAGTGCTACATAGCCAAAGAAATTTCCCATAATTTGGCCAGGATTTTAGTGTAGTTGTTGGATAAAAGA AAGTAGTAATGATGCTTTACTCATTCTGACAAATCAATTCTGTCTAGATAGCATTTTCCTTTGCTTTTTTTTTATAGGCA AAAGAATTATGCACTATTTAAACAAAATATCTCACTGTTTCTTAAAGATCCACTGCTTTGCAATAAAAACTAGAATGTCA ACAAGAAAGCAAGCTCAAAGTTGTAGAGATAAATATGTTATGATGGATGAATGGATATATACACAAGACAAGATGGATTA AGAATGAAAGTATTGGAGAGAAAGTTAGACTACTATTTGATTATCTATTGTTGGTTTGCTTCTGATTTACAATGTCTCTT TGTTGTGCTTATTGGAATTCACTTATTTGATGGATAGATGTCGATGCTTCAAATGGAAAAGATGAATCATTGTCCATGAA GGCAGAGTTCGGAGCTAAAAGCTCACATGAACCTTCCGAGTGAGAACAACACACTTATCTTTGTTTTTTGGAGTGGTTTC TTTACATTGAGTATATGATCAATTGGCCTTTATAGTGCCTTCTGCCTACTCAGGCATTACTGATGCATATAAAATTATAT TTTGTTGATTCTCATCTTATTTTAGGTCAATATCTGCAATCTCAAGATTTCTGAAAGACATGAAAGAACTTTTGCTTAAT AAGGTTTTTGTCGTCACTGTTCTAGGTACTTCTTCCTCCTACTGATTCTGCATCAACTACTTTCTTTCTTTGTATTTAAG TTTTTTTGTTGTTATATTCATCTCTGAAGCTACTACATATTCTTACAAACGATATTGTTTTACCGTGACTCTTAATATAA TTCTATCATGTGAATGTCTAAATGCAGGTTACATAGCATACAACTTTGTCATAGGTGCTTACTCGTATTGGGGTCCCAAA GCTGGTTATAGCATATATAACATGGTAAGAATTGGTTTCATCTAATGGTGACATGTATGCATAAGATTTTATTAAGATTG TTGTTTATTCTTTCTTTTGTATCTTATTACTTGCTTAAATTAAGTATATGCCTGGAAATTTAAGACAATTTCCCGGTGAA ACACTTTCTTTGGTGCAATATTATTGTATTGAGAACTGTTTACCTTGGCAGACTAATGCAGATATGATATTCGGAGGAAT TACAGTTGTATGTGGAATTTTGGGCACTTTAGCAGGAGGCTTTGTTCTTGATTTCATGGATAACACCCTTTCAAATGCAT TTAAGGTTGGTATTTGCATGTGGATTCTAGCATCTTTTTTCTTCATGTTTATCCATCGCCAATGCAGTTTTTATTTTATT TTCTTATTTGTTGAGCACATTGAAGATCAATATGTTAGGTGCCTGGATTTACACCTTTAAAACTGTTAATTTGCAGGTTC TCTCATTGTCAACATTAATTGGCGGTGCATTTTGCTTTGGTGCCTTCTTATTTAAAAGCATGTATGGCTTCTTAGCCTTT TTTGCCATTGGTGAACTACTTGTTTTTGCCACTCAGGTATAGTACTTCCCTTCCCAGCGTGAGGAAATTTCTTCAGTGTT TGCTAAACTTGATGCATTAAAAGATCAATTTTTAATGGAATTGAGTTTGTGTATTATGTCTAGCCTAGATAATTTTCTGT TACTGCATTTTTATATATATGCTGAAATAGCTTGTAAGCATTGGAATATATGGTCTAAATTAATACTCGTTAGAAACAGT TATAAATATAATATAAAATCATTCTTGTGTCTTCACCTAATAGTTTAAGCTTTTAAGATAGTTGATTCATGACTTGGTAT CAGAGTTTCTGACCAAGTGGTCTAGAATTCAAACACTGTCACCCCCCATTGATTCAATTGAAAGTTGAATTTCAATACAT GATAGGTGGTTATGCATTGTTCATCCTTCAAGCACAAATTTAAAGGGTTCTTGTGTGTGGGATAGTAGTAGAAATATAAT ATAAACTATTTGTGTTTTCGCCTAATAGCTTAAGCTTTTGGATTGTGCTTGCTTCATTACAAAAAGTCAAAAACCACTTT GTGCATCTGGTTAAAACTCAAAATCAAATCTTACTCCATATTTTATCATTTTTCTTTCAGGGTCCGGTGAATTATGTATG TCTTCATAGTGTTAAACCAAGTTTGCGGCCGCTATCAATGGCAGTGTCTACTGTTGCTATTCATATCTTTGGAGATGTAC CTTCCTCGCCTCTTGTTGGTGTTGTACAGGTTAGCATTACCAAACAAGAGAGATAGAAGCAGATTATGATCCTCTCATTG AAATTTTGTATCTATCCATATCTTTATACTTATGGAATAAGTAAGACCGTATGAATATTTGCAAAAAGAGGTAGACACAA ATGTTAACATGACAAGATGATGTAATATGAGAGCATCCTAATCTAAATAGAAGCAGAGAAAATAACAAAATGTATTATGC CATATGCATTTTTCTGACTGTATGCACATGCTGGTAATGCAGGATAATATTAACAACTGGAGAACTACTGCGCTGATCCT AACAACTATATTTTTTCCAGCAGCTATAATATGGTTTATAGGTGAGTTATCATGGAACCTCTGTTGATTTTGTACAAAAA AATCACATTACTACTAATTTCTTTTAGAATCATTATACAAGAGCAAGGATGTTTTTAGGGAAAAAATGAGGGGGAATAAC ATTATTTGATAAATCAACTCATATATATTGTATGTTACTACAGGAATATTTATGCATAGTGTGGATAGATTTAATGAAGA CAGTGAGGATCAAGTATCAAGTGTTGAAAGGACAACCACAGCACCATTGCTTCAAGAGAAGACAGGACAAACATCAGCAT TACAAGAATGCTGACGTTTTCTTTTTATTTATAGATTTTTATGCCTGTCCTAGCACAATTTATCCCACAATGCAGTGTAA ATAGCTTTCTTTCTTTTTTTGTTTTTGGTAATTGGAATTTTATTTTCATTTTGGTGTAAGTATCTTTTTACTTTTGCTTC ATGGAAATTAATCAAAATATATATAAGAAGCATGCACCCATGTATATTAGCTCTCCGATAAGGGTGTTTATAACCGATTT AATCCAATACAAACCAAAAAACCAATAAAAAAACTGAAATTCAATTAAATTGAAAACCGAACGGATCCAAAATAGCCCAC TATGCAATATGCATGTTCTTTCAGCATTAAGTTTTAAACTAATGTGTATTGTTCAATATTATACAAAA
CDS sequence (LotjaGi4g1v0042700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCACAACATGAAGCAAAACCTGAGACTTTGTCTTCTTCCCCTAAACCTGAGCCTTCTGCGGAGCCAGACATGGCTAC CAAGTCCACTATGATTCCGGCAACTTCATGGTTTACACCCAAGAGGTTACTGGCTATATTTTGTGTGATTAACATGTTAA ACTATTTGGACCGAGGAGCGATAGCGAGCAATGGGGTTAATGGAAGTCGTGGAACTTGCACAAAAGGTGGTACCTGCACG TCTGGAACCGGAATACAGGGTGATTTCAACTTGAACAATTTTGAGGATGGAGTTCTATCATCTGCATTTATGGTTGGACT TCTTATTGCTTCTCCAATATTCGCATCTCTAGCAAAGAGTGTAAACCCTTTTAGACTTATTGGAGTTGGATTGTCAGTTT GGACTGGTGCAACCTTTTGTTGTGGTTTTTCTTTCAATTTCTGGACCATTGCACTCTGTCGAATGCTTGTTGGTGTTGGT GAGGCTTCATTTATAAGTCTTGCTGCTCCTTTCATTGATGACAATGCCCCGGTTTCACAGAAAACGGCGTGGCTTGCTAT ATTTTACATGTGCATACCTGCTGGATATGCAGTGGGCTATATCTATGGTGGTTTGGTAGGAAGTCATTTTGGTTGGCGTT GGGCATTTTTTACGGAGGCTGTATTGATGCTTCCATTTGCTATTTTGGGATTTGTTATGAAGCCTTTGCAGTTGAAAGGT TTTGTCCCTGCTGATTCTAAGAAGGCGCTGACATCTGAGACAGTAGGGTCTGAAGTTCAAGATGTCGATGCTTCAAATGG AAAAGATGAATCATTGTCCATGAAGGCAGAGTTCGGAGCTAAAAGCTCACATGAACCTTCCGAGTCAATATCTGCAATCT CAAGATTTCTGAAAGACATGAAAGAACTTTTGCTTAATAAGGTTTTTGTCGTCACTGTTCTAGGTTACATAGCATACAAC TTTGTCATAGGTGCTTACTCGTATTGGGGTCCCAAAGCTGGTTATAGCATATATAACATGACTAATGCAGATATGATATT CGGAGGAATTACAGTTGTATGTGGAATTTTGGGCACTTTAGCAGGAGGCTTTGTTCTTGATTTCATGGATAACACCCTTT CAAATGCATTTAAGGTTCTCTCATTGTCAACATTAATTGGCGGTGCATTTTGCTTTGGTGCCTTCTTATTTAAAAGCATG TATGGCTTCTTAGCCTTTTTTGCCATTGGTGAACTACTTGTTTTTGCCACTCAGGGTCCGGTGAATTATGTATGTCTTCA TAGTGTTAAACCAAGTTTGCGGCCGCTATCAATGGCAGTGTCTACTGTTGCTATTCATATCTTTGGAGATGTACCTTCCT CGCCTCTTGTTGGTGTTGTACAGGATAATATTAACAACTGGAGAACTACTGCGCTGATCCTAACAACTATATTTTTTCCA GCAGCTATAATATGGTTTATAGGAATATTTATGCATAGTGTGGATAGATTTAATGAAGACAGTGAGGATCAAGTATCAAG TGTTGAAAGGACAACCACAGCACCATTGCTTCAAGAGAAGACAGGACAAACATCAGCATTACAAGAATGCTGA
Protein sequence (LotjaGi4g1v0042700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAQHEAKPETLSSSPKPEPSAEPDMATKSTMIPATSWFTPKRLLAIFCVINMLNYLDRGAIASNGVNGSRGTCTKGGTCT SGTGIQGDFNLNNFEDGVLSSAFMVGLLIASPIFASLAKSVNPFRLIGVGLSVWTGATFCCGFSFNFWTIALCRMLVGVG EASFISLAAPFIDDNAPVSQKTAWLAIFYMCIPAGYAVGYIYGGLVGSHFGWRWAFFTEAVLMLPFAILGFVMKPLQLKG FVPADSKKALTSETVGSEVQDVDASNGKDESLSMKAEFGAKSSHEPSESISAISRFLKDMKELLLNKVFVVTVLGYIAYN FVIGAYSYWGPKAGYSIYNMTNADMIFGGITVVCGILGTLAGGFVLDFMDNTLSNAFKVLSLSTLIGGAFCFGAFLFKSM YGFLAFFAIGELLVFATQGPVNYVCLHSVKPSLRPLSMAVSTVAIHIFGDVPSSPLVGVVQDNINNWRTTALILTTIFFP AAIIWFIGIFMHSVDRFNEDSEDQVSSVERTTTAPLLQEKTGQTSALQEC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 26 | 26 | - | – | |
| Phobius | 1 | 97 | 97 | - | – | |
| MobiDBLite | 1 | 17 | 17 | - | – | |
| PANTHER | 6 | 527 | 522 | 2.6E-299 | – | |
| PANTHER | 6 | 527 | 522 | 2.6E-299 | – | |
| SUPERFAMILY | 22 | 488 | 467 | 4.45E-55 | ||
| Gene3D | 39 | 239 | 201 | 2.9E-27 | – | |
| ProSiteProfiles | 43 | 494 | 452 | 21.522 | ||
| CDD | 44 | 490 | 447 | 2.89139E-88 | – | |
| Pfam | 83 | 446 | 364 | 2.2E-32 | ||
| TMHMM | 97 | 116 | 20 | - | – | |
| Phobius | 98 | 117 | 20 | - | – | |
| Phobius | 118 | 123 | 6 | - | – | |
| Phobius | 124 | 145 | 22 | - | – | |
| TMHMM | 126 | 148 | 23 | - | – | |
| Phobius | 146 | 150 | 5 | - | – | |
| Phobius | 151 | 172 | 22 | - | – | |
| Phobius | 173 | 183 | 11 | - | – | |
| Phobius | 184 | 202 | 19 | - | – | |
| TMHMM | 184 | 206 | 23 | - | – | |
| Phobius | 203 | 213 | 11 | - | – | |
| TMHMM | 210 | 232 | 23 | - | – | |
| Phobius | 214 | 233 | 20 | - | – | |
| Phobius | 234 | 303 | 70 | - | – | |
| Gene3D | 298 | 493 | 196 | 1.4E-12 | – | |
| Phobius | 304 | 326 | 23 | - | – | |
| TMHMM | 308 | 330 | 23 | - | – | |
| Phobius | 327 | 345 | 19 | - | – | |
| TMHMM | 345 | 366 | 22 | - | – | |
| Phobius | 346 | 367 | 22 | - | – | |
| Phobius | 368 | 378 | 11 | - | – | |
| TMHMM | 379 | 397 | 19 | - | – | |
| Phobius | 379 | 397 | 19 | - | – | |
| Phobius | 398 | 402 | 5 | - | – | |
| TMHMM | 402 | 424 | 23 | - | – | |
| Phobius | 403 | 426 | 24 | - | – | |
| Phobius | 427 | 432 | 6 | - | – | |
| Phobius | 433 | 449 | 17 | - | – | |
| Phobius | 450 | 468 | 19 | - | – | |
| Phobius | 469 | 491 | 23 | - | – | |
| TMHMM | 471 | 493 | 23 | - | – | |
| Phobius | 492 | 530 | 39 | - | – | |
| MobiDBLite | 508 | 530 | 23 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi4g1v0042700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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