Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi4g1v0047100 |
Transcript ID | LotjaGi4g1v0047100.2 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Serine/threonine-protein kinase; TAIR: AT1G65790.1 receptor kinase 1; Swiss-Prot: sp|Q39086|SD17_ARATH Receptor-like serine/threonine-protein kinase SD1-7; TrEMBL-Plants: tr|A0A151RE53|A0A151RE53_CAJCA Serine/threonine-protein kinase; Found in the gene: LotjaGi4g1v0047100 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:5682344..5683699) extracted from Lotus japonicus Gifu genome v1.2.
ATCCACTTAAATATAATAGGAACAACTGTGGTTATTACCAGGGCAGATTGAAGGAAGGTCATGATATTGCTGTGAAGAGA TTGTCACAAACTTCTGGGCAAGGTGTGGAAGAATTTAAAAATGAGGTCAAATTAATTGTTAAACTTCAACATCGAAATCT CGTTCGGCTACTTGGTTGCAGCATTGAGAGGGATGAGAAGCTGCTAGTGTATGAGTACATGGAGAATAGAAGCCTTGATT CCATTTTGTTTGGTGAGTTCTACATCATGTTTTCATCTTTCATTATGTATGGCTCATTCAGGCTTTGTGCATGTTTGGAA ACCCTTCCAGAATTAATTTTTAAGCCAGAATCGATTATAGGGTGAAACTTCTGTGATTAGCATCTGTATTTCATAATTGA TTCTGGTAAAAGAAAAGTTGATTCCGACATTTTAATGTGTATCCAAATGCTTGGTATTTATGATTATCCAGATAAGGCAA AAAGATCCTTATTGGACTGGCAAAGGCGTTTCAACATTATATGTGGAATAGCTAAAGGACTTCTTTATCTACACCAAGAT TCCAGACTTAAGATCATCCATAGAGATCTTAAGGCAAGCAACATTTTACTTGACAAAGAGATGAACCCAAAGATATCAGA CTTTGGGATGGCTAGAATTTTTAGTTCTGATCAGACTGAAGCAAATACAATGAGAGTTGTTGGAACATAGTAAGTACCAA TTTAAACACACTAATATTCTCAAAAGAACCAAATTTAGTGATATATTGTGTTTATGAGTATTCTTCTTTTGTGCAGTGGC TACATGTCCCCTGAATATGCAATGGATGGGAACTTCTCAGTGAAATCTGATGCTTTTAGTTTTGGGGTTCTTGTGCTGGA GATTGTAAGTGGAAAGAAGAACAGAGGATTCTATTATGCAAACAAAGAATTAAATCTTCTAGGACATGTATGTGGAAGAG CTACTTTTATTAACATGTTACTTAGTTATATTGTTATCTTGATCTTTCTTGTTAACAGATAAAATAATTATGCTTTTTTT ATAGGCATGGAAGCTGTGGAATGAAGGAAATGCATTAGAACTGATTGATTCTTCCATTGACAAATCATATTCACCATCTG AAGTTCTTAGATGCATACAAGTTGGGTTGTTATGTGTACAAGAGCGAGCAGAAGATAGGCCAACAATGTCTTCAGTGGTT TTGATGCTGAGCAGTGAAACTGCAACAATGCAACAGCCCATGAACCCTGGGTTTTGCCTTGGAAGGAATCCTGTTGAAAC TGATTCTTCTACAAGTAAACAAGATGAATCATGCACAGTGAACCATGTCACTGTTACAATGGTAGATGCCAGATAG
CDS sequence (LotjaGi4g1v0047100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAATAGAAGCCTTGATTCCATTTTGTTTGATAAGGCAAAAAGATCCTTATTGGACTGGCAAAGGCGTTTCAACAT TATATGTGGAATAGCTAAAGGACTTCTTTATCTACACCAAGATTCCAGACTTAAGATCATCCATAGAGATCTTAAGGCAA GCAACATTTTACTTGACAAAGAGATGAACCCAAAGATATCAGACTTTGGGATGGCTAGAATTTTTAGTTCTGATCAGACT GAAGCAAATACAATGAGAGTTGTTGGAACATATGGCTACATGTCCCCTGAATATGCAATGGATGGGAACTTCTCAGTGAA ATCTGATGCTTTTAGTTTTGGGGTTCTTGTGCTGGAGATTGTAAGTGGAAAGAAGAACAGAGGATTCTATTATGCAAACA AAGAATTAAATCTTCTAGGACATGCATGGAAGCTGTGGAATGAAGGAAATGCATTAGAACTGATTGATTCTTCCATTGAC AAATCATATTCACCATCTGAAGTTCTTAGATGCATACAAGTTGGGTTGTTATGTGTACAAGAGCGAGCAGAAGATAGGCC AACAATGTCTTCAGTGGTTTTGATGCTGAGCAGTGAAACTGCAACAATGCAACAGCCCATGAACCCTGGGTTTTGCCTTG GAAGGAATCCTGTTGAAACTGATTCTTCTACAAGTAAACAAGATGAATCATGCACAGTGAACCATGTCACTGTTACAATG GTAGATGCCAGATAG
Protein sequence (LotjaGi4g1v0047100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MENRSLDSILFDKAKRSLLDWQRRFNIICGIAKGLLYLHQDSRLKIIHRDLKASNILLDKEMNPKISDFGMARIFSSDQT EANTMRVVGTYGYMSPEYAMDGNFSVKSDAFSFGVLVLEIVSGKKNRGFYYANKELNLLGHAWKLWNEGNALELIDSSID KSYSPSEVLRCIQVGLLCVQERAEDRPTMSSVVLMLSSETATMQQPMNPGFCLGRNPVETDSSTSKQDESCTVNHVTVTM VDAR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 209 | 209 | 1.2E-95 | – | |
Gene3D | 1 | 209 | 209 | 2.1E-62 | – | |
PANTHER | 1 | 209 | 209 | 1.2E-95 | – | |
SMART | 1 | 172 | 172 | 8.0E-6 | ||
ProSiteProfiles | 1 | 211 | 211 | 24.782 | ||
SUPERFAMILY | 1 | 223 | 223 | 8.63E-52 | ||
Pfam | 2 | 194 | 193 | 1.7E-28 | ||
ProSitePatterns | 46 | 58 | 13 | - | ||
Pfam | 198 | 244 | 47 | 1.4E-18 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | Protein serine/threonine kinase activity | Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi4g1v0047100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…