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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0073600 |
| Transcript ID | LotjaGi4g1v0073600.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Leucine-rich repeat receptor-like protein kinase; TAIR: AT3G19230.1 Leucine-rich repeat (LRR) family protein; Swiss-Prot: sp|Q9FZB8|Y5181_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g51810; TrEMBL-Plants: tr|G7JL96|G7JL96_MEDTR Serine/Threonine kinase, plant-type protein, putative; Found in the gene: LotjaGi4g1v0073600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:9370149..9374775) extracted from Lotus japonicus Gifu genome v1.2.
TGCAAAGCAATGTCGAACCTTCTTTCTCTTTCTCCTAAATTTTCAACAAAACCACGAGAAAAGGCTTCCCAAATCGCAGG CTTTCAGGTGGGGCAGTGGCTTATGACAATATGAGCCCCTTCTTCCTCCTCCTATGGCTTGTCACTATCCCTGCCCTTGC CCACTCTGCCGTTCCTGACCCTCTTGGTACAAATCATATCCCATCATATGTATCCAAATTAAATCAACCCCATGAACAAT CACAACACAATTCATCAACCAATCTTGCTAACATAATCATTAATATGCATTAGCTCCTATACCTTCACCAGATCAACATA ATCATTAATATGCATTAGCTCTCATCATGTCAATTAAAAAAATGCATGAGCGGGGCAATTACAAACCTACATTGCAGTTT TTTAATTGAGTTGTCAAAATTTTATTGTTGAGACAAAACCGTTTGGAACCTTGTATTATGTGCATTGTCATACATTGTGT TCCCTCTTTAAGAATTTGAACTGCATAATTTAATCGTAATTACATAATGTATTATCTTAATGTGACTAGAAATATAGTTT CCTTTATTCCGTTAATGTATGAATAGAGCTTCTAACATGGTCATTTTCAATTTGCATGAATACAGGGTATTTTTTAAACT GTGGAAGCTCTAATGAGGTAACGGTAGAAAGTCTCAAATACATTTCTGATGGAAGCTACATCAAGGTGGGAAGCACCGCC ACTATTAACAAGCCAGACTTGTTGCCCACATTGTCTACATTGCGATACTTTACCAACACATCGGCTAGAAAGTATTGCTA TTCATTTCCCGTCATCAAAGGCGGCAAGTACCTTGTGAAGACCATATACTATTATGGTGGTTTTGACGGAGGAAAGCAGC CGCCGGTTTTTGATCAAATCGTTCAAGGGACAAGATGGAACACCGTGAACACCACTGAGGACTATGCCAAAGGTCTTAGC TCCTACTATGAGATTGTGGTGGCGTCGGCCGGGAAGACGTTGAGTGTGTGCTTGGCTAGGAATGCACATACTGGTAGTTC AAGCCCTTTCATCTCAGCTTTGGAGGTGAAGAGCTTGGATGATTCATTGTATAATCCCACGGACTTTACCAAGTATGCTC TTGTAACTGTTGCTAGGCATTCCTTTGGAGGTGAAGATTTCATCAGGTACAAATGCATTGTGATTTGGGGTTTATATTTT GTGTAATGTCTAGACAAAATATATACATTACAAAAGCTAATAAGTACATTCAACATTATAGAGATTATAATGTTAATATG GATGAGTGATTATATTTTACGCATAAGGAAAAATTAGAATTATAAATGTGATTATTAGAGAGATAGTTGGGTTAGGTCCT ATTCTTATAAAGATACTAGAATCATAGTGTAGCTGGTTTGGGCAGAGAAGCATAACAAACATGGTTGAATAGATAAAAGA GAAAACAAATTTCAACTTGTTAGATATTGTGGCAACTAGGACAGGGCTGGGTGAATATTGTTGGTGAAATGAGAACGCAC AGATAATGAATGAGCAACTTCTGACAAGGTTTTTAGGCAGAGGGAAACACGATTCAACCAATCTCGCACGAGAATAAGAG AGGTATTCTCAAACTGTATAGCTATGGACTATAGAAGAGCTTTTTTTTTTGATAGGCAAATGTTAGTGGTTAGTTGTTAG TAAGTTAGAAAATCCCTTCAAATTTCCCTTTCAGGATTCGAACCCTGGACCTTCCCCTCTCCAACCCTTATGTCCCCTAG CTCTTACCACTTGAGGTTACTATAGAAGAGTTTTTAAGATTTTATGTGTACTAATCATGGCTACAAGGTGTATCTACATT TTCTAGCGCTCAGTTCACGGAAACTCTAAAGTTAAGTGTACTTTGCTTTGGTGCAATGTGAGATGAGTGACCTATTGAGA AGTTTTTTCAGTGAGCGCGTAAAAGACTCGAATTTTAACAATGGTGACCGCCACATCGAAATGGTAAATTAGAAAGACTA AAACACTTCTTTGAACTTACATAACAAGATATTATAGCATGTGATCCATGTAACTGATCTCCACCTAATAGGAAAAGACT AGATATTGTATTAGAGTGTAGGCATGCACTTTGCAAACGATGTGGACTTATTTTAATGATATAAATGTGAATGTTTGTCT AAGAAAATGGAAGAAAATGTGGAATTAAATAGAAATGGTGAGAATTCTGATCATAAAGATTTTCATATGTGAACCTAGTT TTCCAGATGACAAATTCAACCGGATGTGGCAGCCATTTAAGGACCAGAATCCTGCTGTGGCAAGCCATTCAAATGTAACT TCTTCAGATTTCTGGAACCTCCCACCAAACAAAGCATTTAGTTATGGAATCACCACTAGTAGAGGGAAAACCCTTGAAAT CCAGTGGCCACCAGTGTCCCTTCCAAGCACCATGTACTACATTTCCCTATACTTTCATGAAAACAGAAGTCCAAGCCCTT TTAGCTGGAGAGTCTTCGATGTTTCGATCAACGGACACACTTTCTTTTCCAACCTCAATGCCACAACTAAAGGTGTTACA GTTTATGCTGCACAGTGGCCACTTTCTGGGAAAACCAAAGTCACCTTGACCCCTTCTAGAGGCATGCCTGTTGGACCTGT GATCAATGCTGGGGAAGTTTATCAGATTCTGCCTCTTGGTGGCAGGACACAAACTAGAGATGGTAAGTTTCTAGTCTTGC TATTTTGTAATTTTCTTTTGTTAAATTACTATTATAAAGCTACTTGTTTAAGTCTTCTAGCTGTTTCTTTGGCTACCCAT AGTGATTGCAATGGAAGATTTGGCTAAAAGCATTCAGAACCCACCTCCTGATTGGCATGGTGATCCTTGCTTACCTAAAG GGAATTCATGGACTGGAGTTAAATGCTCCAATGGTTTCATTGCGCGAGTCAAGACAGTGTAAGTTTGTGTTTGGATTAGA GTTAGCAGAATTGATGTCGGACATAATTGATTATTCTAAAATTGTGTATGGTACAAATGAATTAAAATGATGTGATCTAT ATTTGGACACTTTTATGAAAAAAGTGACTTTTGCAGTCTCATAATTTGATTATATTTAACGCAAAATTAATTGTTTGCTG TGACAAGTAGAATTGATTCTTGACCCGTGAAATAAATTTTACCGTTACACCTAAACATCATTTTACTGGTTAGATTTGAT TTGAACCAAGTAGAACTGATTTTGCAATCCAAACATGAACTAAGTTCCCCTGTAAGACACCATTCCATTTAAAAAATGCT TTATTTTACTTCTAAGTAAGTAAGATTGTTAAAAAGAATCTCCTAACAATTGTCACATTTTCTAGTAAACTTTAAAGGAT AAATTCTCTACTGCCTTTCATGTTCAATGGTGGATTGACAGTTTTGGTTTATTGTTTATGTGAAGGAACTTAACAAATGC TGGGCTTGCTGGGTCACTTCCTCAAAGTATTGGAAATCTAAATAAACTTGTTCATCTGTATGGAATCTAGCCCTGTGACT TCAAATATTTCAAGTATTTCATATTTTTTCTTTCTATTTTTGAACTGCTAAATCATGTTGCTTTGTGAATATCTGCTTAC AGTTGGCTTGGGGGAAACAAACTCTCAGGCGCCATCCCTGACTTGAGTGGGTTGAAGGAGTTAGAAACTCTGTATGTATC TCGCATTAGCTTTTATCTCTGAGATTTCTTGAATTGTAAAACATCAACCTGATATCTAACTCTATTTTATCTTCAATAAT TGTTAAATTAAGGCATTTGGAGAATAACAAGTTCCAAGGACCAATTCCTCCATCAACAAAGAAACTCCCAAAATTGCGCG AAATGTAAGATTTTTCAATTTTTAGAAATATAACTATCAAAGACTTGACAAAGATTTATTCTTTACAGTTCATTTTCCCC CTCTCTTTATCACTCCCTTTTTATCACATTCATCAAGCTCGCATACTAACTTTTTTTGTGCTCTGACAAATGTTATCTGT ATAACCAGTCACTCAGATTTTCAATAAAAACAACTTTGATGGGAAAGTTCCCAAACACTATAGAGAAGTGAAAAGAAAGT ACAAGTAAGCACAGCACTGTAATTTTTTTACCTTTGCTACTTATAACTCTACAAGAGTTCCTCTGAAGTTTAAAACCACA TTGCTTACTGATAAATGATTATTGTTTGCTTTTGGTTTTAAGGTGGCTCTTGAAGTTCATCTGCCAGAATCAACATAATG ACATTGCAAATCCGGCCGATTTTGTATGTGACTGGGAAATCTTTGATACAAATATGTCTTCATCGGATTATCTTGCATCC ATCATATTGTAAACCAAAATTACATCAAATGTAAACATTATAAATTAGTAATGAATAGAGAAAATAGATTCTACACATTG GACTTATGGTTGTTTGCTTTTGCTGCTCATGTTTGACGCCATATGAAACTATGCCATGATGCATTGACTACAATTGTGAT AGATTGAGATCGAAAGATTCCATTGTTAATCAAAGAACCTTTACCTCACCAATTTCATAATACATGATTTTTCACCTCAG ATACCTTTACCATGTTAAGAAATATTAGCATCAATGACATTGCAATGCTTATTAGCATAGTCTGCCG
CDS sequence (LotjaGi4g1v0073600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGCCCCTTCTTCCTCCTCCTATGGCTTGTCACTATCCCTGCCCTTGCCCACTCTGCCGTTCCTGACCCTCTTGGGTA TTTTTTAAACTGTGGAAGCTCTAATGAGGTAACGGTAGAAAGTCTCAAATACATTTCTGATGGAAGCTACATCAAGGTGG GAAGCACCGCCACTATTAACAAGCCAGACTTGTTGCCCACATTGTCTACATTGCGATACTTTACCAACACATCGGCTAGA AAGTATTGCTATTCATTTCCCGTCATCAAAGGCGGCAAGTACCTTGTGAAGACCATATACTATTATGGTGGTTTTGACGG AGGAAAGCAGCCGCCGGTTTTTGATCAAATCGTTCAAGGGACAAGATGGAACACCGTGAACACCACTGAGGACTATGCCA AAGGTCTTAGCTCCTACTATGAGATTGTGGTGGCGTCGGCCGGGAAGACGTTGAGTGTGTGCTTGGCTAGGAATGCACAT ACTGGTAGTTCAAGCCCTTTCATCTCAGCTTTGGAGGTGAAGAGCTTGGATGATTCATTGTATAATCCCACGGACTTTAC CAAGTATGCTCTTGTAACTGTTGCTAGGCATTCCTTTGGAGGTGAAGATTTCATCAGTTTTCCAGATGACAAATTCAACC GGATGTGGCAGCCATTTAAGGACCAGAATCCTGCTGTGGCAAGCCATTCAAATGTAACTTCTTCAGATTTCTGGAACCTC CCACCAAACAAAGCATTTAGTTATGGAATCACCACTAGTAGAGGGAAAACCCTTGAAATCCAGTGGCCACCAGTGTCCCT TCCAAGCACCATGTACTACATTTCCCTATACTTTCATGAAAACAGAAGTCCAAGCCCTTTTAGCTGGAGAGTCTTCGATG TTTCGATCAACGGACACACTTTCTTTTCCAACCTCAATGCCACAACTAAAGGTGTTACAGTTTATGCTGCACAGTGGCCA CTTTCTGGGAAAACCAAAGTCACCTTGACCCCTTCTAGAGGCATGCCTGTTGGACCTGTGATCAATGCTGGGGAAGTTTA TCAGATTCTGCCTCTTGGTGGCAGGACACAAACTAGAGATGTGATTGCAATGGAAGATTTGGCTAAAAGCATTCAGAACC CACCTCCTGATTGGCATGGTGATCCTTGCTTACCTAAAGGGAATTCATGGACTGGAGTTAAATGCTCCAATGGTTTCATT GCGCGAGTCAAGACAGTGAACTTAACAAATGCTGGGCTTGCTGGGTCACTTCCTCAAAGTATTGGAAATCTAAATAAACT TGTTCATCTTTGGCTTGGGGGAAACAAACTCTCAGGCGCCATCCCTGACTTGAGTGGGTTGAAGGAGTTAGAAACTCTGC ATTTGGAGAATAACAAGTTCCAAGGACCAATTCCTCCATCAACAAAGAAACTCCCAAAATTGCGCGAAATTCACTCAGAT TTTCAATAA
Protein sequence (LotjaGi4g1v0073600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSPFFLLLWLVTIPALAHSAVPDPLGYFLNCGSSNEVTVESLKYISDGSYIKVGSTATINKPDLLPTLSTLRYFTNTSAR KYCYSFPVIKGGKYLVKTIYYYGGFDGGKQPPVFDQIVQGTRWNTVNTTEDYAKGLSSYYEIVVASAGKTLSVCLARNAH TGSSSPFISALEVKSLDDSLYNPTDFTKYALVTVARHSFGGEDFISFPDDKFNRMWQPFKDQNPAVASHSNVTSSDFWNL PPNKAFSYGITTSRGKTLEIQWPPVSLPSTMYYISLYFHENRSPSPFSWRVFDVSINGHTFFSNLNATTKGVTVYAAQWP LSGKTKVTLTPSRGMPVGPVINAGEVYQILPLGGRTQTRDVIAMEDLAKSIQNPPPDWHGDPCLPKGNSWTGVKCSNGFI ARVKTVNLTNAGLAGSLPQSIGNLNKLVHLWLGGNKLSGAIPDLSGLKELETLHLENNKFQGPIPPSTKKLPKLREIHSD FQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 17 | 17 | - | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| SignalP_EUK | 1 | 19 | 19 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 17 | 17 | - | – | |
| Phobius | 1 | 19 | 19 | - | – | |
| Phobius | 4 | 11 | 8 | - | – | |
| Phobius | 12 | 19 | 8 | - | – | |
| PANTHER | 16 | 478 | 463 | 4.4E-216 | – | |
| PANTHER | 16 | 478 | 463 | 4.4E-216 | – | |
| Phobius | 20 | 482 | 463 | - | – | |
| Pfam | 29 | 349 | 321 | 1.4E-71 | ||
| Gene3D | 360 | 480 | 121 | 2.7E-25 | ||
| SUPERFAMILY | 374 | 478 | 105 | 4.16E-19 | – | |
| ProSiteProfiles | 426 | 448 | 23 | 7.419 | ||
| ProSiteProfiles | 449 | 471 | 23 | 5.332 | ||
| MobiDBLite | 458 | 482 | 25 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi4g1v0073600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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