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Field | Value |
---|---|
Gene ID | LotjaGi4g1v0076600 |
Transcript ID | LotjaGi4g1v0076600.2 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | 30S ribosomal protein S9; TAIR: AT2G09990.1 Ribosomal protein S5 domain 2-like superfamily protein; Swiss-Prot: sp|P46293|RS16_GOSHI 40S ribosomal protein S16; TrEMBL-Plants: tr|I3S7M8|I3S7M8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0076600 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:9816944..9828831) extracted from Lotus japonicus Gifu genome v1.2.
CAAAGCCCATAACTCCAGAAATGCTATGAAAAACCCTAATTCCCTCATAAACTCACAAGCCTCTGTGAATCTCTCACTCA CCACAACACAAAATTAGGGTTTCACTGTGAGAGGCGAGAGCGAGAGAGAACGATGGAGCAAGTTCAGTGTTTCGGCCGCA AGAAAAACGCGGTGGCGGTGACCTACTGCAAGCGCGGCCGTGGCTTGATCAAGATCAACGGCTCCCCAATCGAGCTTATC GAACCGGAGATTCTCCGATTCAAGGCCTTCGAGCCCATCCTCCTCTTGGGGAAGAGCCGCTTCGCCGGCGTCGACATGCG CATCCGCGTCAAGGGCGGAGGACACACCTCGCAGATTTACGCCATTCGTCAGAGCATTGCGAAGGCGCTTGTTGCTTTCT ACCAGAAGTATGTTGATGAACAGAGCAAGAAGGAGATCAAGGATATTCTGATCCGTTACGATAGGACCTTGCTTGTTGCT GATCCTAGGCGCTGTGAGCCGAAGAAGTTTGGTGGTCGTGGTGCTCGCTCCAGGTTCCAGAAGTCTTACCGTTGAAGAAG AAGAAACAGAGGAGGGAAGTGTTTTTTTTGGTGGTTTGTTTCAGATTTCGGTTCATGTTTTGTGCTGTGGAAAACTTTTG TTCTTCATGCGTAGTTTTGTTTTGATTATCAGATATTGTGTTATTTTAAAGGATTTTGTTATTTAGATATTGATGCAAGG ATCACATTAATCTAGTTTTTAGTTTTATTATTCTGTTGATTATGCGCTTTCTATGATGTGTTTTGTAATTTTATTTTATT GTTATGCTGTTACATGTGAAATTGAAAATTCCTTGCAATATTATGCCAAAACAATACACACTTCAAACCATTCTTACTTG CAAATTGTAAGCTTGTTTATTTGTTGGGTGTGTTTTAGCTACTACAATCTGTTTTGCATATCGTTGGATGTGTTGCCGGG CATAGATACGGCTCTGGTGGATGAATTGACGATGATGTTTATCAGAGTATTTTAGATTTCTCGAGGATTTTTTGTGTCTG GGTATAAATTTACTGATGTTGGAATAGTGCCGAATGATCTTTTGCTCAAATTAAGATTGGGTTTAAGTTTGTGGATATGA CTCATTTCTTCCCTAGGAAGTTAAAGGATGGAATCCTGAGTATATCAGATTAATTAGTAGTCGGGCATAGATGCTCTGTG GGGCAAATTGAAGATGATGTTTATCGGAGTATTTAAGATTTCACATGGATTTTTTGTGTCTAGGTATAAATTTACTGAAG TTGGAATAGTGCTGAATGCTCTTTTGCTCAAATTAAGATCGGGTTTAAGTTTGGGGATTACTCATTTCTTCCCTAGGAAG TTAAAGGATGGAATCCTGAGTATATCAGATTAATTAGTAGGACATTGGTACTGATCCTACAAATGGATTGGTTGGTTGGT CATAGATTGTAGGTATATGACACCTAATTTGCATGCTGTGCTTTCCTTCCCATACTGGCAAAAGTTGTGGGTTACTAGTA TCTGAAAGTAGATGAAATACACTTTGGAAATGATTCACTATTGAAATTATTTTCAAGTTTTGTGCTGCTGTTTACTGGAA TAGATATACATGTGTCCAATGCTGATAGTTCTGTTCCTAATTTTTTCAAAGTATTCCCCTTTCATATTTTTTTACCATTT TCACCACCCTCTCCAGTTTCCTCATGAGTGAAGCATTCAATTTTAATCTAGCATTGAAATTTATTAATTTCATGGAACTG AGCTTGATTCATTTTATGCCTGAGCTACTTTAGCTCGACTCTTATTTAGGATGAAAATACATGGTCTTGTACAGTTGTGC TTTCAAAATGATTCACTACTGAAAATATTTCCATGTTTGTGCTTTTTTTACTGGAATAGATATACCTAATTTTTCAATAC TATTCTCTTTTTACCATTTTCACCATCCTCTCCTATTTCCCCATGCCATACAATTTTAATAACAAAAGCTGAGTGAAGAA TTTATTTTTAATTTACAATTGAAATTTACTATACACATGGAACTGACCTATCGTAGTCATTCAGGATCAGAGCCACTCTC TAGCTTGACTATTTTTGTATGAAATTCATGGTCTTGTAATTGTAGCCTTCTCCCTTGTCACGCTTAGCAAATTAATATGA ATTATTCTAAAATCTAAACTATACTACCAAATTTGGGAAATGTTTTTAGTTAAAATCTCTCAAATTGCTTCCTTTTTACA TTCAAAAAATAATAATTATCTTATGAAAGATACCATTCTCTTCAAGGTGTATTTGGTTTGCATTCCTCGATTTGAAAAAG TACAATTTCATGCTCCTATTGAGTTTTACTTCAATATGATTTTTGGTGAACTACTTAGATTATTGTTAGAAAAAGTGAAA CTATGTGATTGAATTTGTAGATTGATGCTAGTAAACAAATTTGAGCTTGTGTTTGGTAACTTTTTCTCTCTGATCCGGGC AATGAAAACACTCGTTCTTTTAAAAAGAGTTTTCGGTTGAACACAAACAGCCGATAGTCTCTATTTAAGAAGCTGAAGAG GCTCATTTCGATGCACTTATAACATCGTTTGATGGTGTCCGTTATTTGACATGTCATATACCTTGCCAGCCTCTGCGTTC ATAATTGTATTCTTTTCTGCTATTAAATTATATATAGCTAAGCTATAGTGCAAGACTGCAAGCAAAACTCCCAGTTTAAT CTCAAAACACCAAAAATACAATAACAAACCTCTCACTCTCTGGGTCTCAAATCTGAACCTCAATCATCTCCAATCAAAGA AGCTATTGCCAACCAATAAGACATAAAAATCATTCAGGTACTAAGTTCAAAGATGATATAGGATAGATAACAGTATTGTT GAGCCTGACTTTCTCTTCAAAACCATTATTTTACCAGGTTTTATTTCCATTTTCAGTCATGCTACGGCTAAAAACTTGGT GCCTTTACACCTCCCTCTCTTTCGTCTAAACAGCAGCTTCCTCGGTAAATCAAAGCCTCCTCTTCTTTACACGGTACAAT TTCCAGGGATCATATAACATTGCTTTTATTATTTTGCTCTGAAGTGAAACTTGTTTCAGGTCCATTAACCATGATATGAG GAGTTTGCAAAGCACTTTTTTCAGGTAGAAGAAAGGGTGGCCTCTGCGTACCTTCAATATTTCTACACTCTTCAATTTGG AAAGATTTATTGGTCCTTGCTTAATGATCTTTCTCAGCTTGCATTTGATTGAGCATAGAGCATCGTTTGGTCATATTCTT CTTTTGGGTTGGATTGGCCATAATACTAGTTGCAGAGACAACCCTGTCAAAAAGTGCTACTTCACTAGATGAAGCTAGTG CGTTGAGTTGTTTCCCAAGGTTGAGAATGGTTTCTTGACACTCAGCTAACTTTGATGAAGTTGTTGTGATCTCCCAGCCC TGAATTTTTGGTCGAGATTCATTAACCAAGTGTTTGCTTCAAAGGAAATAGAAGAAAAATTGTTAATGAAAACAATTGAT ATGCCATTGTAACGTAAAGAGCTGCGATTATCAGGTTTCTAAATTGTGGTCCGCAACTGCAAATGCGGCCGCAACATAAA GGGTTTTTTGTCCCCACAAATGTATCGCAAGTGCAATTGTGGCTGCATCAATTCACATTTGTCCACAACTCTGTAACATA ACCCCAACAGCGCAACCATATAGTCCACAATACCAATTCAAGAAAGAGAGCATTGTCTTACAGTTTGATGAATCTTTTTC ATTTCGCATCTGCTAGATGTTGGACATTCCTTCTTTGCAATGCTGTTAATTTTTTGAAAAAATAATAAGTAATTAAAGGG AATGGCACCAGAATCAATTCCCTACGCAATGAACCAAATAGTTTGACTCATTGTTAGCCACTTTGTCACCGCAAAAGGTG GAACATGGGAGCCATGGGGAGTCGCATTGTGCAGATCATGAGATATGCAAGGTACCAGTGCAGTGCACGTATTGTTTTGT CAAGTTCAGACTCTCTTTATCTTTTAATTTTTCATTATCAGATATTATGTTATTTTAAAGGAGCTTGTTATTTACATATT GATGCAAGTATCACATAAATCTAGTTTTTAGTTTTATTATTCTGTTGCTTATGCGCACTCTTTTATGTGTTTTGGAATCC GATTTTATTATTATGCTGTCACCTGAAAAATTCCTTACAAGATTATGCCAAAAAAATATACACTTCAAGCCATTCTTAAT CGCAAATTGTAAGCTTCTTTGTTGTGTGTGTTTTAGCTACTGCAATCTGGTTTGCTTATCTCTAGATGTGTTGTTGGGAA TTGATTTGTTACATCTCTCGTGGAAAAATCAAGATGTTGTTGTCTGTGTATAAATGTACTGAAGTTGGAATAGTGCCTAA TGATCTTTTGCTCAAATTAAGATTGGTTTAAGTTTGGGTATATGACTCATTTTTCCCTAGGAAGTTAAAGGATGCATGGA ATCCTGAGTATATCAGATTAATTAGTAGTAGTACATTGGTATTGATCCCACAAATGGATTGGTTGGTTGGTTATAACTTT AGGCAATGTAGGAGGGACTATGTATGGTAATGGCACCTATTTGTATGCTGTGCTTCCCTCCCCTTACCAGCAAAAGATGT GGGTTACTAGTATCTTAAAGTAGATGAAATACACTTTGAAAATGATTCATTTTATGGTGTACAATATTTGACAAGTCATA TAACTTGCATTATTGTATTCTTTTTCGCTATCCAATTGTATAAAGTTACAAGATCATGCAAGTAAAATTCACGGCTAATC TCAAACACCAACAAAGCAATGTGTTTATTTACACCAGCAATATTTACAATAACAAACCTCTCACTGGGTCTCAAACCTGA ACCTCAATCATCTCCAATCAAAGAAGCCATTGCCAACAAATAAAACATAAAAAGCATGTTACATAAAAAATCCAACAGGC ACTAGATTCAAACATAATGTGACCGATAGCAGAAGCTTCTGAGCTTGTGCTTCTCTTCAAGACCATTATTTTACCAGGTT TTATTTCCATTCTTTGTCATGCTAAGGCTAAAAACTTGGTCCTTTTAACATGCCCTTTCTTTCGTCTAAACAGCAGCTTC CTCAGTAAATCAAAGCCTCCTCGTTTTTTACACGGCACAACTGCCAGAGATCCAATAGCACTGCTTTTATTATTTTGCTC TGAATGAATACTTGTTTCTGGTGCATTAACCATGATATGAGGAGTTTGCAAAGCACTTTTTTCAGGTAGAAGTAGGGGTG GCCTCTGCGCACCTTTAATATTTTTACATTCTTCACTTCTGTCTGCTTTATCATCACCCTCAGCTTGCATTTGATTGAGC AAAGAGCATCGTTTGGTCAAGTTCTTCTTCTGAGTTGGATTGGCCATAGTACTAGTTGCAGAGACAACCCTGTCAAGAAG TGCTACTTCACTAGATGAAGCTAGTGCCTTGAGTTGCTTCCCAAGGTTTAGAATGGTTTCTTGGCACTCAGTTAACTTTG ATGAAGCTGTTGTGATCTCCCACCCCTGAATTTATGATGTTGAGATTCATTAACCAAGTGTTTGCTTCAAAGCAAGTAGA AGTAAAATTGATAATGAAAACAATTGATATGCCATTGTAACGTAAAGAGCAGCGATTATCAGGGTTTTAAATTGCGGTCC GCAACCGCAATTGCAATTGCGACCGCAGCATAAAGGGTTTTTGAGTCCTTGCAACGGCATCGCGGTCGCAATTGCGGCTG CATTAGTTCACATTTGTCCACAACTCCACGACATAACTGCAACCATATATAGTCCACGATACCAGTTCAAGATAGAGAGC ATTGTCTTACAGTTTGATGAATCTTTTCCATTTCGCATCTGCCAGATGTTGGAGATTCCTTCTTTGCAATGCTGTTAAAT TTGTTTTTTTTTTCATGTTCTCAAAATCAGATTCATTGACCAAGAAAAAAGAATTGCAAAAGACATGAAACTAAAACAGA GCAGAGACATTTTCTTACCTTTCCAGCTGGAGTTGAAGCTCAAGACAAGTTGCTTCCAAGTCCTCAAACGAGTTCTTCTT AACCTCTAACTCAACTTCTAAGGATGAAAACTTTTGAAAGATGTCATTTAACTTGGCCTGAGCTATTGTAAACTGTGTAT CAAGATCTTCATTTATCATCTTTTCTTTTTCAATCTGATCTTCAATTAAGGCTTTGGATTCTTTTAAGGTCTCTATTTCT GATTCTAAACCTTTGATGCTATTTTGTGCTTCTTGACATTGTTTTGTCAAGTTCTGACTCTCATCAGTTACTGCCAGCAG CTTCACTTCCAAGTCTTTCTTTGAAGATTCTGTGTTCCTCAGGTCATCTTTTAATTTTCTAATTTCTTGAAGGAGATCAT ATTGATTTTGCTTTGTGTTGAAAAGTCCACCCTGATCATCTGGATATGCAACTGAAGGCGAGTGAAAAGCATGTTTATCA TCAACATCTATTTCATTATTTTCATTTTCATTTTGTGATAGATGACAGATAAAATGCTTCTTGATCTTATCCCTTGCAAT TGAAGCATTTGTTGAGTTGGCAGTGTTATTAATACTCCAGTCCAAAGCAAATGCTACTTCCTCAATGAAGTTTCCAAAAT CAGCTCTCCCCGTTAATAAGTCTTTGCAGGTATGGACAAGTTGATGCAGAAGAGGATTCAAGTCTGAAACCTTCCACTGG AGAACATGAACAAGGTACTCTTTGGATATTGGTGATTGAGCTATGTCTGAATTCTGATTCTCCTCCAAGCAATTTGGACC ATTGTTACAGATAAATGACTTAGGAGCAATTCTTTCAATGAGCTTGATAATTCTATGGACTGATTTTTGAATTACATCAG ATTCACAAGCAGTTGAGTGCTTTATGTAACCCAAAGCAATTTTTATGTCGTCAAACAGTTCATCGAGACTTCTTTTTGTG ACGCGTTTCTCCTCCAAGATTGCATTCAAGACAATCTGAAGCCAGTCAAATGATTTTTCAGTTGTTGGATGTTTGAATTG AATCTCCTGTTTCCTCCCACTGAGGCCTTGATCTTGTTCAACTGGCACTAGCTCCCTCCCACTGACATTGGAGCAGTATT CTCTTTTAGGCATATCGACAGAAACGATAGCTCGTTTCTCCATCTCAACAAAATCATCCATGAAATGAATGTCTGAAAGT TCTATGGATTTACTACTCTTGTGATTTTTAGCCTCTGCAGTTCTAAATTGTTCAAATTCTGAAGTAGGATCATTCGCCCA GGATCTGGAAGAGATAGCCTCATCATCAATACTAGAAATGTCAAATTTTGTGATTAGAGGAAGTTCACCTGATGTGGGAT GATAACACCTTGCTAGCTCCATGGACTTCTTCTGAGTTTCTGAAAATTTTCTAAGCAGAATCTCTGCCTGTGATAATCTG GAAGCTGTTTCAGCATACATAAATCTTGAAGAATCCAGTTCAGAGTTTTTCTTGGTTAAAATTTTCTTGAGAGCCTTGTT CTCCTCATCCATATCTTGCAAACGTTTGATCATCAAGCCGGTACTCTTTTCAGACACTTCATAATTGTTTTTGTAAATCA AATCCCTAGTAGGATTTGACTTTCTTCTTCTCATATCTGTTTCTCTTTTCATCATTCCAACGTCATTCTTTAGATTCACC AAACTAGTTCCATGAGGTCTTTTCTGCAGCCGGAGACGTAGTCTTTCACACTCAGCTTCTAAGTTTGAGGCTTTCTGAGA ACTCAAAAGATACTTATTATGTGATTCTTCTGCATGATATCTGCTATACTCCATTGCTTCCTTTCGAATCTCGAGTTCCT TCTCTAGCATGTGAAATTCATATCTCAGAAATGCGTTTTCTTTTTCTGTGGAATCTAACCTTGCCATCAGTGTTCTGAAC TCAGCATCAGCTTCTTGTTTACATCTAAGCATGTCCCCAATGGCTTTGTCTTTGGAAAGTAAGGCATTAGTTAGATGAGT GTTCTCAGTAGTTAAGTCATCTATTCTTTTACTTGCTTCTCTCAACTTCTCTTCCAACTCTTTCTGAATCTTCTCATGCT CTTTTGATGTCTTTTGAATGGAACCACACAACTTTTGCTCTTGTTCTTCTTGAACATGGCTTAATTGCTGCAAAGGTCCA TCCAACACTGCATCTAGAGGAGTAACACTTTCAGCAGGTACTGCTTTATCCAAATCCTTAGCAGATTCCACTTCTACCAA ATTGTATGCCAAAAAAAGAAAAATGAGTGTGCCTCAGAAAGCATTTATTTAAAAGGAAACCCCCAAGAGAAGTTTCATGA ACCAGTTATATCATAAAAACCTAAGCTGTTTGGTGAATACATTTATATGATTTTATATTATATTTCTAATATGCCACTCA CGCAAGTTGCAAAAGCCAATTGGGCTTGAAGCATGGACAATTCACATGCTCACCTATCATGCGCTGAAATTCAATTTTGT TATTAGAATAATGGGGCAACAAGGATTAAGCTCTGCACCACTTGGTCATAGAGGCTATGATACCATGTCCTGAACTAATT ATCCCAAAAGCTTAAGCTCTTGGATGAAGACACATGAATGATTTTATTTATATTTCTAAGAAGAAAGCGTGGGAGAAGGA ACATGTAACAGTAAGATACCAACCTCCAATTTCATGTTGGGACCTTTGGGCATGTTTTGCTAAAGAGTCCTCTCCAACAG GAGGATCAAGGAGGACTGTTGCCAACTTCTCGTTTAGACTTTTTGATGATCTTTCTAATTCAGTTTCCTTATCTGTTGAA AGTTTGAGTACCTGATAAAATTTAGTACTGTCAGTATATTAAGCAGGTCAAATATGTCTGATGTGAATTCAGCTCTGTTG AGGAGAACTATCATGTATCAACATTTTGGCCAAACATGGAAGATGATCATAAACAGGTTTTGGTTTCCAGGAAATGGAAG AACAAGATAAAATGAGGAAAGAAAATAGCAGCATATGAAAATGAGTGAACTAAAGCTTTGACTACCTCTTTTTCAATGCT TCTAGAGGGACTGATGATAACTTGGTCCATTGCCAAGGTTGTCTTCTCTATGGATCTTTTACTCCAAGGCCATGGCTTGT GGTTCATGATTTCAGGTGCTATTCAACAACAAAAAGAGAAAACTTCATGCTACTATACAAATATCTGTCAGTGATGAAAA TTTCTGTTATTGCATTATTAGTTTCTATGTATGGTTGTAAAAGAAAAATCAATAAGTGACCAAGAAGCCAAATCAAAGAA ATGCTGGTACAGACTACAGAATCATGAATTTGAACATTAGCAAGAGATACTCCATTATCAATAAACAGTTCCACTGACAT CTTATCTATCATTTGAAGCATTTTGCAAGCCTACAGTTCCACTCATATTTGGACCGTCCGGTAACTACCTACAATGGCCT CGTGACCCAGGCCAAAGTTCGGTCAATGTGTCTAGTTTTTTTCTACCCAAATCACCCAATATACTTTGAATAATTGATGA TGTGAAACAACCAATTATCTCAAAAGTTTAAGCTCTTAAGGGATACAAGAATGACACTCTTAAAAATAATGATATAAAAT CATTCTTCTGTTCCTTAGGCAAAGAAAAAAGAAAAACTAATGAGAGTGCGTCACCATTGTCATTGTCATAGAAAGGGGAA GAAAAATAAGAGATACCACTGTTATTGCCAAAGAGAAGAAGAGTGTAGGTGTGAGTGAGAGAGAAGTATAGGCGAGTTCA ACCTCGTTGAAACCCTTTGGGGTTTGATCTCCATGTGGTGATTCACCGGAGAAAAGATGTGGCCTTGTGTCGCTGCCGCG AACGAAGGAGAAAATAACCTCGTCGTCATTGTCATAGAAAAGAGGAGAAAAATAAGAAAGATCACTGTTATTTCCAAGGA GAAGAAGAGTGTAGGTGTGAGTGAGAGAAAAGCATGCATGCAAGTTCAACCTCGTTAAAACCCATTGGGGTGTGATCTCC ATGTGGTGATTCACCAGGGAAAAGATGCGACCTCTTGTTGTTGCCGAGAACGAAGGAGAAAATAACCTCGTTGTCGCTAG AGTCCTAGGAAAAGGTTCTCGAACGGCGGTGGGCCTATGTACACGGTGGTGCTCATGCTGGCAGGAGCTCACAGCTAGGG CATCATTATCACGGTGAGAAAGTGATTGTGGAACAAGAGGTTGGAGGAGGACGAAACAGAGAGTTGCGCAGAATGAGAGA AGAGAGCGAGAGAGGAGGAGACAACGTGTGTGATTCACACGTAGAGTGAAAGATAGTTGTTGGTGACCCAACTTGCTTTG CCTAGACTTGTACTCATTGGAACGTCATCAGTTGTTAGACTTCTACTTCTTTTGTCCGAGTCTTTTGTCAATTCATTCTT CTGAGTCTCACAAGCCTGTATGACTTGCTTTGTTGGAATGTTAGGAGGACGACTATGGGTGGGGGCGAGTTGCAGTGCGT GGCCTCACATGTAGTGGTGGTTGCTTTCGGTTTGAAAATCGAAAACATAACGGAGTTCCAATTTGATGAACACAACGGAA TAGTACTGATGACATAGGTCAAAGATTGAACCTGTTCTTAATACCATGTCAAACAATCAATTATTCCAAAAGTTTAAGTT GTTGAGTAAGTACCACAACTAATTATTCCAAAAGTTTAATTTCTAAAAATTATCACCGTAGAAAATACCGAGCTGTTAAA AGTTACTCTGTTACCTTTATACCCTAAGCAAATGTTACTTAATCTACCTAAGTTGATAGACCGAAATGGAATGGAAATGA ACTAAAAAATCCTTCGAAATACAAAATATGTATGGTTTAGTGTTCAGGACTCTCTGCATGCAGCACATGTTCTCTACCGC CCCTCATACACAATTATGGCTAATATTGATATTTTACAATTAATGGTTAAGATTAATCTAAATAAAAAATAGATTATTAA ATTAAAAAATTGTGGTCATTTGTCTGCTATCCAAATTAATGTTTCTTCAGCTATCATATGGGTCTCTATGCAGCTACTCC GCCCTGGTTAGCCACCTATACTTGCATTGCATCTTGACCACCTGAAGTAGGAAACCGAACATCTGTGGTCCCATTCATGA GAATCGTGTTAAATATCTCACGCCACTCACACTACCAGAGATGTTCATTTAATTTAATTGGTTGGTTTAGTTTAGTTTTC ACATCATCTTTTGACCAGTATGTACAAGTTTTCATGTGGAGTATCACCTACATATATGCTTCTTCAATTCAATATGTTAT GCCTAATTGACTGTATATTTATTAGTGCATAGCACTTCAATTACTTCAAACTTCTAATTAAAGCTTGTGATCAACCTTTT TTAGGTAAAGAAAATGAAGTCCATGCCTTACAGCTTACATATGTTGTGAATCCTCTGCATCTGACTATTACACACCCAAA TTATGGTCCTTAAAAAACGGTATATATGCATTTTCTTGCTTTGAGCTGAAAATTTGAAGTTACCTACGCTATGTATATAT ACTTGTATGTTAAAACTTTAACATCAGGAAATTGATTGAGGATGAAGAGCATGGAAAACCACCAGCAGAAAATATAATGA GATAATGAGTTAATGACAACAGCTATTAGCTACTAATGGAAGGGAAAACAGAGTAAAAGGTCAAATGCACTGAGAGGAGT TGCTATAGTACCTGGAAAAACGTAGCATCAACAAGGCTTAAAAAAGGCACTGCAAGGTTACTGAGTCAGAATGAACACTT GAGCTGGCCACTAATGGAACTTGGAGACTAAAGTGAAAAGAAATGGCAGATGAAGTTATGGGAAAAACGCCAACGGATAT TGCGTCATAGGATACTCACCCTCTCCACCGACAGCTGTAGAAATTCTG
CDS sequence (LotjaGi4g1v0076600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGCAAGTTCAGTGTTTCGGCCGCAAGAAAAACGCGGTGGCGGTGACCTACTGCAAGCGCGGCCGTGGCTTGATCAA GATCAACGGCTCCCCAATCGAGCTTATCGAACCGGAGATTCTCCGATTCAAGGCCTTCGAGCCCATCCTCCTCTTGGGGA AGAGCCGCTTCGCCGGCGTCGACATGCGCATCCGCGTCAAGGGCGGAGGACACACCTCGCAGATTTACGCCATTCGTCAG AGCATTGCGAAGGCGCTTGTTGCTTTCTACCAGAAGTATGTTGATGAACAGAGCAAGAAGGAGATCAAGGATATTCTGAT CCGTTACGATAGGACCTTGCTTGTTGCTGATCCTAGGCGCTGTGAGCCGAAGAAGTTTGGTGGTCGTGGTGCTCGCTCCA GGTTCCAGAAGTCTTACCGTTGA
Protein sequence (LotjaGi4g1v0076600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEQVQCFGRKKNAVAVTYCKRGRGLIKINGSPIELIEPEILRFKAFEPILLLGKSRFAGVDMRIRVKGGGHTSQIYAIRQ SIAKALVAFYQKYVDEQSKKEIKDILIRYDRTLLVADPRRCEPKKFGGRGARSRFQKSYR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 140 | 140 | 1.8E-90 | – | |
PANTHER | 1 | 140 | 140 | 1.8E-90 | ||
Gene3D | 1 | 140 | 140 | 3.9E-69 | ||
SUPERFAMILY | 3 | 140 | 138 | 1.21E-38 | ||
Pfam | 8 | 140 | 133 | 1.3E-31 | ||
ProSitePatterns | 68 | 86 | 19 | - | ||
Coils | 136 | 140 | 5 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Structural constituent of ribosome | The action of a molecule that contributes to the structural integrity of the ribosome. | ||
Cellular component | Ribosome | An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins. | ||
Biological process | Translation | The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome. |
Expression pattern of LotjaGi4g1v0076600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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