Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0076800 |
| Transcript ID | LotjaGi4g1v0076800.1 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | E3 ubiquitin-protein ligase MARCH6; TAIR: AT4G34100.2 RING/U-box superfamily protein; Swiss-Prot: sp|F4JKK0|SUD1_ARATH Probable E3 ubiquitin ligase SUD1; TrEMBL-Plants: tr|I1JE11|I1JE11_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0076800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:9832422..9839913) extracted from Lotus japonicus Gifu genome v1.2.
ACCGCAAAAAATGTTACTACTAGATAGAGGTGCAGGCAGGTACAGTTACCATTACAGCACACAAATCACACATACGCCTC CACGTCATCCAAAAACCCGCATGCACCACCATATACGTCACCAATCCCCAAACACCCTCGTGTCATATAAATCCTCCATC GAGGGCATTCCCGGAAATACCCAATCTCCGATCATCCATCATTCTCTCTCTCCTTCCACCGTCTCGCTCCCTGAGTCACC GCCACCACCACCACCACCGCCGACTCGCTCCCTGGTCGGCTCGGTATGGAGATCGCTCACGAGCCACCGCCTTCCCTTGA CGGAAGCCCTACCGCCGCCCAAACCCTCGCGACCTCTCCGTCGTCGTCGCCTTCTTCCTCCTCTTCTTCCGCTTCGTCGC CGCGTGGTTCCAAGGGAAAGGAGATCGATGCGACCTCGTCGGTGACGGCGACGACTGCCACGACCGCGCCGCCGCCTGCT GCTAAATACGACGATGAGGAGGATGAAGAGGACGTGTGCCGGATATGCCGAAACCCTGGAGATGCCGAAAATCCCCTCCG GTATCCTTGTGCGTGCAGCGGGAGTATCAAGTTTGTGCATCAAGATTGTCTTCTCCAGTGGCTTAATCACAGCAATGCTC GCCAATGCGAGGTTTTACCCTCCTCTTTCATGTGCTCACTGTTTGGATTAATCGTTTTTAGAAATATTCAATTATCAGTT CTATTTTCATTGAATTTCTGATCCGAATCGTTTATAGTTGGGGATTAATCTTATCTAAATGGACTTTGTATATGATGAAT TGAGCTAGCAATTTTGAACTGCTCAGTAGAAATTAGAAGGGAAGAAAAATAAGCACTCTTGTCCTTGTTGTAGTGTGTAT TATTGGAATTCTAAGCTTAAAGTTTGATTTTGTTTTCGAAGCTATGCATATACTATGTTCAGTACTAGGCTAAACTTACC CCAATACTTTGATTGTATTTGAGAGGTTTCGGTTTTATTCCTAAATGTGCTTCACATGGTGTACAGGTTTGTAAGCATGC GTTCTCGTTCTCTCCTGTTTATGCTGAGAATGCGCCAGCTAGGTTACCTTTTCAAGAGTTTGTGGTTGGAATGGCAATGA AGGCCTGCCATGTTCTGCAATTCTTTTTGCGTCTGAGTTTTGTGCTATCTGTGTGGCTCTTGATTATACCTTTCATAACG TTCTGGATATGGCGGTTAGCGTTTGTGAGGAGTTTAGGTGAAGCCCAGAGGTTATTCTTGAGCCATTTATCAACAGCAGT TATTCTGACTGATTGCCTCCATGGTTTCCTACTTTCTGCGAGCATAGTCTTCATCTTTCTTGGGGCCACTTCCTTGAGAG ATTACTTCAGGCATTTGAGAGAAATTGGGGGACAGGATGCTGATAGAGAAGATGAAGTGGACAGAAATGGCGCTCGAATC GCTAGAAGACCTCCTGGACAAGCCAATCGTAATATTAATGGTGATGGGAACGGTGAGGATGCTGGTGGAGCACAAGGAAT TGCAGGAGCTGGTCAAGTAATTAGAAGAAATGCTGAAAATGTGGCTGCACGGTGGGAGATGCAAGCAGCACGTCTGGAGG CTCATGTTGAGCAGATGTTTGATGGTCTGGACGATGCTGATGGAGCTGAAGATGTACCCTTTGACGAACTTGTTGGCATG CAGGGTCCAGTTTTTCATTTGGTTGAAAATGCCTTTACTGTAAGACTATCAATTTTTGTTTTTAAATTGAGTTTCGTTAT TCCTTTATTACAATGTTACTGGGTAAGCTGCATCTCTATATAAATATTGGGTAAGCTGGCCTTGGTGAAACCAAGCTCAT CATGGCATGCTACTTCTTTGCTGTGTTCAGTTGTAATTAACGACCATTTAATCCTGATCCTGACTGGCTGCTAGTTTTTG TAGTTTATGTTTTTAAACTTATGATGTGCTTTATTTTTTTTAGGCCCCATTTTTAAGAACTTAAAGAATACCTTGGTTCT GTTTGAATGAGCACCTTGACAGAGCTTTTTGACACCAATTTAAGCTGCTTTGGGCTTATTTTGATTAACAGAAATTGAAC TTGCCGACGCCTTTTTCAAAACTTAAAGTTCTATTTATAATATTTTTACGTAGTTCATCTCTTTAAATTACCAAATTCCA TTATTCAATTACTGTTTCTGTATGTGTCTATCCAAACACTCTTAAGCGTATTTAGATTGCATTGGTGGCAGTAGACAAGC CCTATTGTCTAAACATTATTTATGCTGTATTTCTAAACAGGATCTTAGTCTTTTTTGAGTGATGGATGAGATGCATATTT GATTAATGAACTTCTATCATTCCATGTGAATGGAAAGATCGCATATAGTATAATCTGATGAAAATGTTATTTCCACTTTG AAAAATATATTCAACGCGTGTGCTTGTAAAATTTCATTAGGGGTTTATAGTTGCATGATCCTCAGTGTTTTGTTTCTGGA AAATTGATTGTGGGATAAATTTTTCATCATTAACCAAAGCATGAGTATCTCACTTATTTTTATTTCATTCTATTGATATT TGATACAACTGCTTCACTTATTGTGTGAATTGTGTAATCATTAACTGAAGATGAGTATATCGCTAGGTGATTGGTCACTT CCTCATATTCATTGGTCAATCTACAGATAAAAAAACCTCTCACGTTTTGTGAACTGTAACCTATTCTGAATAAAATTGTA TGGAAGTCTTAGTGTGTTTTTTCCTTTGATGAAAAAACTTGCTATTGAGGAAATTTATTATTTAGAAATTGAATAGTTTG TTCTCTATGCAGGTTCTTGCAAGTAATATGATTTTCCTTGGTGTTGTCATCTTTGTGCCCTTCTCACTGGGCCGCATCAT ACTCCATTATCTTTCCTGGGTCTTCTCAGCTGCTGGTGGTCCTGTGCTGTCAGCAGTGGTTCAACCTACGGACTCATCTC TTTCCCTAGCAAATATTACTTTAAAAAATGCTCTAACAGCTGTGAAAAATTTGTCATCTGAAACTCAAGAAAGTGGATCA ATTGGTCAGGTTGCAGAAATGCTGAAAGTGAATGCCAGTGGATTGAGTGAAATGTCAAACAACATAAGTGCATCTGTTTC AGCTGATCTCTTGAAAGGAGGGTCTATTGGAACTTCTAGGCTTTCTGATGTTACTACTCTTGCTATTGGATATATTTTCA TCTTGACTCTCATTTTCTGTTACTTTGGCATTGTTGCTTTAATTCGTTACACAAAGGGTGAACCCTTGACCCTGGGAAGG TTTTATGGTATCGCTTCAATAGCAGAGACAATTCCATCTCTCTTTAGGCAGTTTTTGGCAGCAATGAGGCATTTGATGAC CATGGTGAAAGTTGCTTTCCTTTTAGTCATTGAACTTGGGGTATTTCCACTTATGTGTGGGTGGTGGCTTGATGTTTGTA CCATACAGATGTTTGGTAAAACAATGGTGCACAGAGTTCAGTTCTTCTCTGCGTCTCCTTTAGCAAGCTCATTGGTTCAT TGGGTTGTAGGAATTGTGTACATGCTACAAATAAGCATATTTGTCAGCCTTCTTAGAGGGGTAACTTTTCTCACTCTAAA TGATTTTAAAGCTGTTTCTCTATCCAGTGTCATGCTTATTTGTTTCAAATTGCAGGTTTTGCGTAATGGAGTTTTGTACT TCCTTCGGGATCCTGCTGATCCAAACTACAATCCATTCCGCGATCTGATAGATGATCCTGTGCACAAACATGCTCGCAGG GTTCTGTTATCTGTTGCAGTTTATGGGAGTTTGATTGTCATGCTGGTATTTTTGCCGGTCAAACTTGCCATGCGGATGGC ACCATCCATTTTCCCACTTGACATATCGTAAGCTAGCCACTCAAGCAGTTTTAGTAGTTTCTTCAGAATATACCGAACTC TCTGTCACTGTTGTTAACATTGAATATGTTCATTTTTTGCAGGGTATCTGATCCATTCACCGAAATTCCTGCTGACATGC TTCTCTTTCAGATCTGTATTCCATTCGCTATTGAGCATTTTAAATTGAGGACAACTATTAAATCCCTACTTCGCTACTGG TTTACGGCAGTTGGTTGGGCTCTTGGTTTAACTGATTTCTTACTGCCTAAACCAGATGATAATGGTAATCAAGAAAATGG AAACGGGGAGCCTGCTAGGCAGGAAAGGCTACAGATAGTACAAGCAGGGGTGCATGATCAGGGTATGGTTCCATTTGCAG GCGATGATTTGAATGCAGAAGGAGAACTGAATGCTGGAGAGGATTATGATAATGATGAGCAATCTGATTCTGAGTGAGTT CCTTACTTACATATTGAAATCGTACAATTTTGATTTATGAATTACTCAATATTGCACTTCTATAATTCTAGTTATATTAC ACTTTTGTCTATGCTTGAGGATGAGGGTAGGATCAGATTTTGGTTTCATGGTTTGTTGCCTTTCCATTATGTGTTGTATT GAAAAGTCTAGTTGGAGTCATCAGTTTCTTTATATTTGCATGTTTTAGTGTTACTCTGTCACCATCTGATTAAATATTTT CTATTTGACTATAGCAGTTATGCCTTCGTTCTTCGCATTGTTCTTCTACTGGTGATTGCTTGGATGACTCTCCTTGTCTT CAACTCTGCCCTGATAGTTATACCAATTTCATTTGGACGGGCACTTTTCAACTCCATTCCTCGTCTTCCTATAACTCATG GAATTAAGTGCAATGGTACATGATTGATTGAACTAGTTTCTTTTGTCAGTGTGCTTCATAACTCTGAATGTGTTTATAAG GCTATTTCTTTTGTTAGATCTGTACGCGTTCATCATTGGAAGCTATGTAATCTGGACTGCTGTTGCTGGACTTAGATATT CCCTTGACCAAATTAGAAAAAGAAGGATTTCAGTTTTGCTGGGCCAAGTATGGAAGTGGTGCTCCATTGTTGTGAAGAGC TCTGCACTTTTATCTATATGGGTAAGGATGATTCTAATTGCTGAAATTGTTAACAAAAACGACCTTTTTGATTATGGATT GGTTTGTATTTTCTTTTGGGTGGTCAACCTGTGTTTTATTGTTTCAGATATTTGTCATCCCAGTGCTAATTGGGCTTCTC TTTGAGCTTTTGGTCATTGTGCCAATGAGAGTTCCGGTGGATGAAAGTCCAGTGTTCCTCCTTTATCAGGACTGGGCATT AGGCCTTATATTTCTCAAGATATGGACTAGATTGGTGAGTTTCCTTTGTTTATTATGAGCATTTCCATTGTTAAACTTTT GTTGCTTGGCTTTGATTCCTGCATGAGTGAAACCATTATCAGCTAGTTTAAATGCTTCAAGAATCAAGATATATAAATTA TTTGGGAATGATATGTTGCAAAGCTCCTTTTTCTTGCTTTAGAAATTCGGGTATTCTGCTGCACTCAAGTAACTAGCAAA TGTATATTCTGCTGCAGTTTTGTCCATAAAACTCCTTGATAGTGAATCGAGTTTCTTGATTCTGTTGCTTTGTATTGTAT TAGATAGATGCTTGCTGACTCCGAGACAACCCTCTTTAACGTGGCCCTGACACTAATAATGTAATTGTTGGCATCAAAGC ATTGAATAGGCTGTATATAATCCCAATGCTATTGTTTGATCCAAGCAACTAATCCTGTTTGCCGAGATAAGGCTTGGTTG CTGTAAAATATAACTTCTCGATTCTTTTTTTATTTTTCTTCTTTTTACATCAAAGGGTGTTATGAACTTCTTCGAGGATC AATTGGCGGGTTGGTGAATAATGAATGAAGATTTTTGATAGATAAGTAAGAAGCTAGGAGTGATTATGATTTGGATATAA ATGAATTTATTAAAACGGAAAGTCTCACTGTGCTTACTAGGAATAATAATCAGGGAATGTTTTACTCATTTACTTGTTGA ACTCTGATCTTAGTTTCTTACTATCTACAGTTTTCAGATGAGAGATTTTCATTTAGCTGACAAAACAGTATAAGGAAGAA AAAATTACCAGACCTTTTCATATCTGACTAATACGGTGTTTATATTTTTTGCCTCTCCCTTATCTTAGTCGATGTTCTTT GATTTATGCCCCGTTTGTAAATGGATTATCTATGTCCTCAATAATTGTTGTGCAACTGAGTTAACTGAATTCATTTACTA TTTTTCCAGTATTGACTTGGTTCTTTGATTAGGTTATGTTGGACCACATGATGCCTCTCATGGATGAAAGTTGGCGCGTA AAATTTGAGAGGGTGAGAGAGGATGGTTTCTCCAGGCTGCAAGGTCTCTGGGTCCTTCGGGAGATTGTACTTCCAATCAT AATGAAACTACTGACAGCATTGTGTGTACCTTACGTTTTGGCCAGAGGTGTGTTCCCAGTGCTGGGATACCCCTTGGTGG TGAATTCTGCTGTCTACAGGTTTGCATGGATAGGATGCCTCTGTTTCAGTTTTGTGTGCTTCTGTGCCAAGAGATTTCAT GTCTGGTTCACAAATCTCCACAATTCAATTCGTGATGACCGGTATCTCATTGGCCGGAGGTTGCATAACTTCGGAGAACA TGTTGAGAAGGCAAATGAAGCAGAAACTTCCAGTGGGTTGCAGGATACTATATTAAGAGATTCAACTCTAATTCAACAAG ATCGTGATGCAGATGTTGGACTACGGTTTAGGCGCATAAATCAACAGGCAGGCTGAGTTATGTTTCAGGTAGGAAGGAAG GAGACTCTTTAGGTTGTTCAGCCTGAGGCTGGCATAATCGCTGATGCATACTCTATTCCACTGTGTTGGATAGTTGTAAC TCCTCTTGTCATGACAACTGTACTGCTGTCAAAGATAAAATAGTTTGTGCATGCTACTTGTTCAATAATTTAGTTAATAG GAGGATGATGAAAAAAGTTGTAGAGTTTTTTTTTTTTTTTTTTTGAATTCTTTTGTGGAAGAGTGAAGCGGGGTGCATGG TGGATAGTCAGTCTGAGAAACTCGTAATCACTTAATTGTGAAGTAAATAGTTATCCTTAAATTATGGTAATTTTTTTGTT AATTATCAGTGTTTGAGTGTCTAAATTTTGCTGGCATTCAATAGTGGCAATGAGACCTGAATTTGTGATCTGATTCAAAT GACCTAATTCCCCATTACAAGTTTAACACCAGTGGCTGGAGTGCGTGTTAAGTGCAATCGGTTTGATCACTTGTTTCATA TCTCAAAGTAGTCTCTGGATTGTGGTGTTGCACGAGGCATGGTGTATATGTTAAAAATTAGATTGACTGAGCTCATGAAT GTTCAAAATTAGATTTATTATTGTAGAAAATGTTGAAATGTAAAACAGTGGAACTATGGAAGTAGTAAATGTGAGTGTTC TTTAAGAGGAAACCTAGGAATGAGGGAGGTTGGAGGGTTTTTTTTGAACGTAGGGAGGTTGGAAGTTGAAAGTGCAATGT GGCCTTCCTCATTATGAAAGAGTATACACATTAGTGGGTCAAGCATATGTTG
CDS sequence (LotjaGi4g1v0076800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGATCGCTCACGAGCCACCGCCTTCCCTTGACGGAAGCCCTACCGCCGCCCAAACCCTCGCGACCTCTCCGTCGTC GTCGCCTTCTTCCTCCTCTTCTTCCGCTTCGTCGCCGCGTGGTTCCAAGGGAAAGGAGATCGATGCGACCTCGTCGGTGA CGGCGACGACTGCCACGACCGCGCCGCCGCCTGCTGCTAAATACGACGATGAGGAGGATGAAGAGGACGTGTGCCGGATA TGCCGAAACCCTGGAGATGCCGAAAATCCCCTCCGGTATCCTTGTGCGTGCAGCGGGAGTATCAAGTTTGTGCATCAAGA TTGTCTTCTCCAGTGGCTTAATCACAGCAATGCTCGCCAATGCGAGGTTTGTAAGCATGCGTTCTCGTTCTCTCCTGTTT ATGCTGAGAATGCGCCAGCTAGGTTACCTTTTCAAGAGTTTGTGGTTGGAATGGCAATGAAGGCCTGCCATGTTCTGCAA TTCTTTTTGCGTCTGAGTTTTGTGCTATCTGTGTGGCTCTTGATTATACCTTTCATAACGTTCTGGATATGGCGGTTAGC GTTTGTGAGGAGTTTAGGTGAAGCCCAGAGGTTATTCTTGAGCCATTTATCAACAGCAGTTATTCTGACTGATTGCCTCC ATGGTTTCCTACTTTCTGCGAGCATAGTCTTCATCTTTCTTGGGGCCACTTCCTTGAGAGATTACTTCAGGCATTTGAGA GAAATTGGGGGACAGGATGCTGATAGAGAAGATGAAGTGGACAGAAATGGCGCTCGAATCGCTAGAAGACCTCCTGGACA AGCCAATCGTAATATTAATGGTGATGGGAACGGTGAGGATGCTGGTGGAGCACAAGGAATTGCAGGAGCTGGTCAAGTAA TTAGAAGAAATGCTGAAAATGTGGCTGCACGGTGGGAGATGCAAGCAGCACGTCTGGAGGCTCATGTTGAGCAGATGTTT GATGGTCTGGACGATGCTGATGGAGCTGAAGATGTACCCTTTGACGAACTTGTTGGCATGCAGGGTCCAGTTTTTCATTT GGTTGAAAATGCCTTTACTGTTCTTGCAAGTAATATGATTTTCCTTGGTGTTGTCATCTTTGTGCCCTTCTCACTGGGCC GCATCATACTCCATTATCTTTCCTGGGTCTTCTCAGCTGCTGGTGGTCCTGTGCTGTCAGCAGTGGTTCAACCTACGGAC TCATCTCTTTCCCTAGCAAATATTACTTTAAAAAATGCTCTAACAGCTGTGAAAAATTTGTCATCTGAAACTCAAGAAAG TGGATCAATTGGTCAGGTTGCAGAAATGCTGAAAGTGAATGCCAGTGGATTGAGTGAAATGTCAAACAACATAAGTGCAT CTGTTTCAGCTGATCTCTTGAAAGGAGGGTCTATTGGAACTTCTAGGCTTTCTGATGTTACTACTCTTGCTATTGGATAT ATTTTCATCTTGACTCTCATTTTCTGTTACTTTGGCATTGTTGCTTTAATTCGTTACACAAAGGGTGAACCCTTGACCCT GGGAAGGTTTTATGGTATCGCTTCAATAGCAGAGACAATTCCATCTCTCTTTAGGCAGTTTTTGGCAGCAATGAGGCATT TGATGACCATGGTGAAAGTTGCTTTCCTTTTAGTCATTGAACTTGGGGTATTTCCACTTATGTGTGGGTGGTGGCTTGAT GTTTGTACCATACAGATGTTTGGTAAAACAATGGTGCACAGAGTTCAGTTCTTCTCTGCGTCTCCTTTAGCAAGCTCATT GGTTCATTGGGTTGTAGGAATTGTGTACATGCTACAAATAAGCATATTTGTCAGCCTTCTTAGAGGGGTTTTGCGTAATG GAGTTTTGTACTTCCTTCGGGATCCTGCTGATCCAAACTACAATCCATTCCGCGATCTGATAGATGATCCTGTGCACAAA CATGCTCGCAGGGTTCTGTTATCTGTTGCAGTTTATGGGAGTTTGATTGTCATGCTGGTATTTTTGCCGGTCAAACTTGC CATGCGGATGGCACCATCCATTTTCCCACTTGACATATCGGTATCTGATCCATTCACCGAAATTCCTGCTGACATGCTTC TCTTTCAGATCTGTATTCCATTCGCTATTGAGCATTTTAAATTGAGGACAACTATTAAATCCCTACTTCGCTACTGGTTT ACGGCAGTTGGTTGGGCTCTTGGTTTAACTGATTTCTTACTGCCTAAACCAGATGATAATGGTAATCAAGAAAATGGAAA CGGGGAGCCTGCTAGGCAGGAAAGGCTACAGATAGTACAAGCAGGGGTGCATGATCAGGGTATGGTTCCATTTGCAGGCG ATGATTTGAATGCAGAAGGAGAACTGAATGCTGGAGAGGATTATGATAATGATGAGCAATCTGATTCTGACAGTTATGCC TTCGTTCTTCGCATTGTTCTTCTACTGGTGATTGCTTGGATGACTCTCCTTGTCTTCAACTCTGCCCTGATAGTTATACC AATTTCATTTGGACGGGCACTTTTCAACTCCATTCCTCGTCTTCCTATAACTCATGGAATTAAGTGCAATGATCTGTACG CGTTCATCATTGGAAGCTATGTAATCTGGACTGCTGTTGCTGGACTTAGATATTCCCTTGACCAAATTAGAAAAAGAAGG ATTTCAGTTTTGCTGGGCCAAGTATGGAAGTGGTGCTCCATTGTTGTGAAGAGCTCTGCACTTTTATCTATATGGATATT TGTCATCCCAGTGCTAATTGGGCTTCTCTTTGAGCTTTTGGTCATTGTGCCAATGAGAGTTCCGGTGGATGAAAGTCCAG TGTTCCTCCTTTATCAGGACTGGGCATTAGGCCTTATATTTCTCAAGATATGGACTAGATTGGTTATGTTGGACCACATG ATGCCTCTCATGGATGAAAGTTGGCGCGTAAAATTTGAGAGGGTGAGAGAGGATGGTTTCTCCAGGCTGCAAGGTCTCTG GGTCCTTCGGGAGATTGTACTTCCAATCATAATGAAACTACTGACAGCATTGTGTGTACCTTACGTTTTGGCCAGAGGTG TGTTCCCAGTGCTGGGATACCCCTTGGTGGTGAATTCTGCTGTCTACAGGTTTGCATGGATAGGATGCCTCTGTTTCAGT TTTGTGTGCTTCTGTGCCAAGAGATTTCATGTCTGGTTCACAAATCTCCACAATTCAATTCGTGATGACCGGTATCTCAT TGGCCGGAGGTTGCATAACTTCGGAGAACATGTTGAGAAGGCAAATGAAGCAGAAACTTCCAGTGGGTTGCAGGATACTA TATTAAGAGATTCAACTCTAATTCAACAAGATCGTGATGCAGATGTTGGACTACGGTTTAGGCGCATAAATCAACAGGCA GGCTGA
Protein sequence (LotjaGi4g1v0076800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEIAHEPPPSLDGSPTAAQTLATSPSSSPSSSSSSASSPRGSKGKEIDATSSVTATTATTAPPPAAKYDDEEDEEDVCRI CRNPGDAENPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHAFSFSPVYAENAPARLPFQEFVVGMAMKACHVLQ FFLRLSFVLSVWLLIIPFITFWIWRLAFVRSLGEAQRLFLSHLSTAVILTDCLHGFLLSASIVFIFLGATSLRDYFRHLR EIGGQDADREDEVDRNGARIARRPPGQANRNINGDGNGEDAGGAQGIAGAGQVIRRNAENVAARWEMQAARLEAHVEQMF DGLDDADGAEDVPFDELVGMQGPVFHLVENAFTVLASNMIFLGVVIFVPFSLGRIILHYLSWVFSAAGGPVLSAVVQPTD SSLSLANITLKNALTAVKNLSSETQESGSIGQVAEMLKVNASGLSEMSNNISASVSADLLKGGSIGTSRLSDVTTLAIGY IFILTLIFCYFGIVALIRYTKGEPLTLGRFYGIASIAETIPSLFRQFLAAMRHLMTMVKVAFLLVIELGVFPLMCGWWLD VCTIQMFGKTMVHRVQFFSASPLASSLVHWVVGIVYMLQISIFVSLLRGVLRNGVLYFLRDPADPNYNPFRDLIDDPVHK HARRVLLSVAVYGSLIVMLVFLPVKLAMRMAPSIFPLDISVSDPFTEIPADMLLFQICIPFAIEHFKLRTTIKSLLRYWF TAVGWALGLTDFLLPKPDDNGNQENGNGEPARQERLQIVQAGVHDQGMVPFAGDDLNAEGELNAGEDYDNDEQSDSDSYA FVLRIVLLLVIAWMTLLVFNSALIVIPISFGRALFNSIPRLPITHGIKCNDLYAFIIGSYVIWTAVAGLRYSLDQIRKRR ISVLLGQVWKWCSIVVKSSALLSIWIFVIPVLIGLLFELLVIVPMRVPVDESPVFLLYQDWALGLIFLKIWTRLVMLDHM MPLMDESWRVKFERVREDGFSRLQGLWVLREIVLPIIMKLLTALCVPYVLARGVFPVLGYPLVVNSAVYRFAWIGCLCFS FVCFCAKRFHVWFTNLHNSIRDDRYLIGRRLHNFGEHVEKANEAETSSGLQDTILRDSTLIQQDRDADVGLRFRRINQQA G
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 72 | 72 | - | – | |
| Phobius | 1 | 160 | 160 | - | – | |
| MobiDBLite | 13 | 61 | 49 | - | – | |
| PANTHER | 64 | 1077 | 1014 | 0.0 | – | |
| Gene3D | 65 | 137 | 73 | 2.3E-24 | ||
| ProSiteProfiles | 70 | 131 | 62 | 23.425 | ||
| SUPERFAMILY | 73 | 128 | 56 | 3.84E-16 | – | |
| SMART | 77 | 125 | 49 | 6.5E-25 | ||
| CDD | 77 | 126 | 50 | 2.89E-30 | – | |
| Pfam | 78 | 124 | 47 | 1.4E-15 | ||
| TMHMM | 161 | 183 | 23 | - | – | |
| Phobius | 161 | 184 | 24 | - | – | |
| Phobius | 185 | 203 | 19 | - | – | |
| Phobius | 204 | 227 | 24 | - | – | |
| TMHMM | 207 | 229 | 23 | - | – | |
| Phobius | 228 | 349 | 122 | - | – | |
| MobiDBLite | 247 | 281 | 35 | - | – | |
| Coils | 295 | 315 | 21 | - | – | |
| Phobius | 350 | 370 | 21 | - | – | |
| TMHMM | 354 | 376 | 23 | - | – | |
| Phobius | 371 | 375 | 5 | - | – | |
| Phobius | 376 | 396 | 21 | - | – | |
| Phobius | 397 | 476 | 80 | - | – | |
| TMHMM | 475 | 497 | 23 | - | – | |
| Phobius | 477 | 497 | 21 | - | – | |
| Phobius | 498 | 508 | 11 | - | – | |
| Phobius | 509 | 528 | 20 | - | – | |
| Phobius | 529 | 539 | 11 | - | – | |
| Phobius | 540 | 559 | 20 | - | – | |
| TMHMM | 540 | 562 | 23 | - | – | |
| Phobius | 560 | 586 | 27 | - | – | |
| Phobius | 587 | 611 | 25 | - | – | |
| TMHMM | 588 | 610 | 23 | - | – | |
| Phobius | 612 | 644 | 33 | - | – | |
| TMHMM | 645 | 667 | 23 | - | – | |
| Phobius | 645 | 664 | 20 | - | – | |
| Phobius | 665 | 715 | 51 | - | – | |
| TMHMM | 715 | 734 | 20 | - | – | |
| Phobius | 716 | 734 | 19 | - | – | |
| Phobius | 735 | 804 | 70 | - | – | |
| Phobius | 805 | 832 | 28 | - | – | |
| TMHMM | 806 | 828 | 23 | - | – | |
| Phobius | 833 | 851 | 19 | - | – | |
| TMHMM | 851 | 873 | 23 | - | – | |
| Phobius | 852 | 873 | 22 | - | – | |
| Phobius | 874 | 893 | 20 | - | – | |
| Phobius | 894 | 923 | 30 | - | – | |
| TMHMM | 901 | 923 | 23 | - | – | |
| Phobius | 924 | 934 | 11 | - | – | |
| TMHMM | 933 | 955 | 23 | - | – | |
| Phobius | 935 | 952 | 18 | - | – | |
| Phobius | 953 | 991 | 39 | - | – | |
| Phobius | 992 | 1015 | 24 | - | – | |
| TMHMM | 992 | 1014 | 23 | - | – | |
| Phobius | 1016 | 1026 | 11 | - | – | |
| Phobius | 1027 | 1046 | 20 | - | – | |
| TMHMM | 1029 | 1051 | 23 | - | – | |
| Phobius | 1047 | 1121 | 75 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. |
Expression pattern of LotjaGi4g1v0076800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…