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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0083600 |
| Transcript ID | LotjaGi4g1v0083600.3 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | PfkB family carbohydrate kinase; TAIR: AT1G49350.1 pfkB-like carbohydrate kinase family protein; Swiss-Prot: sp|P30235|PSUK_ECOLI Pseudouridine kinase; TrEMBL-Plants: tr|Q2MGQ0|Q2MGQ0_MEDTR Carbohydrate kinase, PfkB; Found in the gene: LotjaGi4g1v0083600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:10954644..10958673) extracted from Lotus japonicus Gifu genome v1.2.
TCTTTGAGCAACATCAGGGGAACAATGCAGAGTCACGAAGCAGTAATAATTGGGGGAATGGTGCTGGACATTCATGCCAT ACCTTCAATCCATGCAAACCCAGGAACTACTACCCCTGGCAAGGTTAGTCAATAAGAGTACCCAATATGATGTGGAATTG CTTTTCAGTTCTCAAGACTAAATGAGGATGATGATGCCAGCTCAATCTTGTTAATAATGTTCATGTCTATCTTATACTGG GAATTGTCAGGTCTATTATTTCCGAGGAGGTGTTGCAAGGAATATAGCAGAGTGCATGTCAAAGCTTGGAGCAAAGCCAT TCATGATTAGTGCTATCGGTTCTGACATGGCTGGTGAATTCCTATTATCTCAAAACATTTTCTCTTTGGTCATCGTGATA ATTTTTATCTTTTAGATTTATTATGGACTTGTGGTTAATAGGCAATGCTTAATGGTAACTTATATTAGGCCTATAGTAAA GTTTGGCAGTTATTCGTAATGGAAACATTTGTCTTATTCATTCATCTGAATTCGGGTGCCTCTTCAATAGACTTAGACTC AAAACTAGTATTGGTTTTCTTCAAACGAACAATGAGGACAAAATAATGTGCTGAAAAAGTCATGCAGTCCTGGAAATGGA AGGAAAGTGTGTAGAATGGGATAGGAATTGGAGCCAACTAGCTGTATTGGCACACCTCAATCTGGTGATGGTATGCCGAA ACATGGAAACAAAGAAAACCACTAAATCTTCAATCATCATAATATATCGCATCACCAACCACAGGAACTAAGTTATCAGC ATGATGAGATTTAAATACACAAAACACGCGTACAGAGATAGCATTGGAACCATTCTCTTCCAATCGCCTAGTTAATGTCT CGCGTAAGATTTTGATCAGAACTACCAATGTCAGTGTGAGCTAAATGTTGACTGGGATAGCTTTTGTCATCCCAATACTT CAAAATCCCAATCCAGGTGGTTTGAAGATAGAGGAAGGTTGTTGACATCCCTAAAGGTGGGAGATAGTGAACTGAGTTCT AACTCCCTGAGGAAGAGGGCATTGGAATGATGAGGAAGAAAAGATTAAGTCATCGTCCAAACTCCATTTCTGGATGGTTG CCCCCTTCTCTACCATTGACATTCTCCTCATCTTCTTGACATTGATCACCAGGAAACATGAAGTTGCGGCTGTCATTTCT GAGCGCTATTTGGCGTGCATCTCAGAGTTTCAGGGCATCCTTTGCTGCTAAAAATTTGGCACAATTGGTGCTCCCAAAAA TGACGGGAAAGCACGCTGGTATCCACTCCAGCTTGTTAGGAAAGTTGGTGGTCACCACTCTAAAGAAGAAAGCGATTCCT GACACCATGTTTGGAACTTCTATGGGAAAAATGAAAGCAAAGTAATCATGGTTGTGGTAAAAAGAAGTGTAGTTGCGGCA AAAGGAAGAGGTGGAAGGACAGTTTGGACTTCTTCTCCATATTTGCTCTCATCCATAGATGATAGATGGCGGAGTCGGTG AGAATGAAGCAAGGGGGTTGGAAAAATGACTGAGAATAGATCTTGGTGCTTGAAGCCCTCATTGACAACCATTGAAGCTT GAATGGAAATGGAATGGCGTAAAGGTGGAGTTGGTAAGCTCCACGGGTGAAGCTCTGTTACCGTCTCAATAAATTGAGAT GAGGCAAAGCAAGAGAAGGAGAGGGAGTTTTCTGCATAACGAGGGAGAGGAGAACACCAAGGAGGTTCCATATTATTCAC TGATTGGAATGGGTGATGCACTACTTGTTTATTTATAATGCACAAGCACCTCTGATACACTAACACACACTATCACATTA ACAAACTAACAGAATTCTTAACTAACTAGAAACAAACAAACTAAACTCAACTAACTCCGTGACTTTTTAAACTACATTTA ATTACTTGGACTCCTATTATCATTTTAGATTACCTGTACTTAATCAACTCATTAAATACGTAGAATAATAATCCCTGAGA GACTGAAAACACCTAATAGGCTAATATTCTTAAATAATAAGATAATAGTTATCATTCATCCTGATGAGTATAGAAAGGCA AAATGATTATTGGGAAACCAACATATGCTTCATTGGTACCTATAACTGACAAATTATGAAGTATCTTAAATTTGTAATGC TTTTAGCTACTACTCCCAATTAGTTTAAGAAGCTTCAGTGGTTGTTTCTTTCTAAGATGTGCGTGTATAAAAAGACAATT TGACCAGAATGACATTTGCCAAATAATCCATGTAAGAAACTTACAAAAAAATTCTTCTTTTATTAAACTTTTTTGTTCTA GGAAATCTATTATGGGAACATTGGAAGTCGGCTGATCTATCTACAGAAGGTAAGCTCTTATGTTTTCGCAGCTGTTCTTC ATATAGACCTGTTATAACTAGGCAAATAATGACATGCATATTATTCATTTGACGTAGGAATTTTGAAGGATAAAGATATT GATACTCCAGTTGTGTGCAATATATTCGATGTTAATGGCGAGGTAGCAGCTGCTGTTGCTAGTGTGGAAGCTCTGGTAAG TTCATCTTTCAAATCTTAAGCTATCAAGTAATCTCCAAACTTACAAGCTAAAAGATGTGGATCACATCCTTACATATTTA TATCATAATAAAAGCCAATCATATACTGTCATATTTTTACAGGAAAAATGTCTGACACCTGACTGGATCCTGCACTTCAA GCACACTTTACTTTCTGCTCCAATGTTAATGGTTGATGCAAATCTGAGTTGTACTTCCCTCGAAGCTTCTTGTAAAAGTA AATTGCATATTGTTCTTTTAATTATCTCCTCCCCAGTCTATGCTGAATTATAAACTCACTATAAATGTTATTTCTTCCCT TCGCATAATTATCTACATTCCTCAGTGGCAGCTGACACAGGGTGTCCAGTCTGGTTTGAGCCAGTGTCAGTTACTAAATC CCGAAGAATCACCTCTATTGCCAAGTATGTGAGTGCCATGCTTTGTACGAACTTAAGCTTTCTTAGATCTATTTCAAGGT TAGGTCAAAGGGATTCGTGAGAAATTGGGAACTACGTTAGTCTGAAATAGTTGTAAACTGCTGTTGTTGCTAGCAACTTT CTTCGTACTGTGTTGAATTCTTTATATTCATTATTTTGTTAATAGTGTTATCATTATGCGTTAATTTAACCTTCTGCAAG TGTCAATGGAAAATTCTTTAAATGTCTTAATTAACATCATTGGATATCATTCGTGCTTATAAAATTCATTCATTGTATCA AAATTGTTTTCTGTGACATTCGTGCATACTTTGTTTAGGTAACTTTTGCTTCTCCAAATGAAGATGAACTTGTTGCAATG GCAAATGCTTTATCTGGCAGTGATGTGTTCCGTCCACTGAAAGAAAACCATAATAAAGATAACTTTTCAACATTATCTTT GTTTCAAATGTTGAAACCAGCAGTGTGGGTTCTGCTAGAAAAAGGCATTAAAGTGGTCCTAGTGACCTTAGGCTCAAATG GAGTGTTTTTATGTAGTAAAGGAGGGCCAAGCTGCTTTAAAGTTCCTGTAGAGAAAACAAATCAGGGTGGTTTTGGTGGA CAGTTATACAAGACTGTTATGCAAAAGTGTCCACCTAATAGTTATTCTGTTTTTTCAGAACTTGAAAGAAGCTCTCATGT CTTTGCTGTGCATTTTCCGTCACTTCCTGCTTCAGTCGTAAGGCTTACGGGGGCTGGTGATTGCTTAGTTGGTGGAATAC TAACATCAATTTGTGCAGGATTAGATATTATGCAAAGTGTGTCTGTTGGCACTGCTGTGGCTAAAGCTGCTGTTGAGGTT GAGGCAAATGTTCCTTCTGCTTTCAACTTAGCTGCTATTGCAGGTTAGGTATTAACTATGTTTCTGGTTATAGCCATGCC CATATTCATGTGCATATCTAGTTGCTTCACATGTTGCATGTTTATAAGTTGCTTTGGTCTTTGTTCAGCATCCGTGATAA CAAATCATTTCACGTCGTATATTTTTGTGA
CDS sequence (LotjaGi4g1v0083600.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCAGAGTCACGAAGCAGTAATAATTGGGGGAATGGTGCTGGACATTCATGCCATACCTTCAATCCATGCAAACCCAGG AACTACTACCCCTGGCAAGGTCTATTATTTCCGAGGAGGTGTTGCAAGGAATATAGCAGAGTGCATGTCAAAGCTTGGAG CAAAGCCATTCATGATTAGTGCTATCGGTTCTGACATGGCTGGAAATCTATTATGGGAACATTGGAAGTCGGCTGATCTA TCTACAGAAGGAATTTTGAAGGATAAAGATATTGATACTCCAGTTGTGTGCAATATATTCGATGTTAATGGCGAGGTAGC AGCTGCTGTTGCTAGTGTGGAAGCTCTGGAAAAATGTCTGACACCTGACTGGATCCTGCACTTCAAGCACACTTTACTTT CTGCTCCAATGTTAATGGTTGATGCAAATCTGAGTTGTACTTCCCTCGAAGCTTCTTGTAAAATGGCAGCTGACACAGGG TGTCCAGTCTGGTTTGAGCCAGTGTCAGTTACTAAATCCCGAAGAATCACCTCTATTGCCAAGTATGTAACTTTTGCTTC TCCAAATGAAGATGAACTTGTTGCAATGGCAAATGCTTTATCTGGCAGTGATGTGTTCCGTCCACTGAAAGAAAACCATA ATAAAGATAACTTTTCAACATTATCTTTGTTTCAAATGTTGAAACCAGCAGTGTGGGTTCTGCTAGAAAAAGGCATTAAA GTGGTCCTAGTGACCTTAGGCTCAAATGGAGTGTTTTTATGTAGTAAAGGAGGGCCAAGCTGCTTTAAAGTTCCTGTAGA GAAAACAAATCAGGGTGGTTTTGGTGGACAGTTATACAAGACTGTTATGCAAAAGTGTCCACCTAATAGTTATTCTGTTT TTTCAGAACTTGAAAGAAGCTCTCATGTCTTTGCTGTGCATTTTCCGTCACTTCCTGCTTCAGTCGTAAGGCTTACGGGG GCTGGTGATTGCTTAGTTGGTGGAATACTAACATCAATTTGTGCAGGATTAGATATTATGCAAAGTGTGTCTGTTGGCAC TGCTGTGGCTAAAGCTGCTGTTGAGGTTGAGGCAAATGTTCCTTCTGCTTTCAACTTAGCTGCTATTGCAGGTTAG
Protein sequence (LotjaGi4g1v0083600.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MQSHEAVIIGGMVLDIHAIPSIHANPGTTTPGKVYYFRGGVARNIAECMSKLGAKPFMISAIGSDMAGNLLWEHWKSADL STEGILKDKDIDTPVVCNIFDVNGEVAAAVASVEALEKCLTPDWILHFKHTLLSAPMLMVDANLSCTSLEASCKMAADTG CPVWFEPVSVTKSRRITSIAKYVTFASPNEDELVAMANALSGSDVFRPLKENHNKDNFSTLSLFQMLKPAVWVLLEKGIK VVLVTLGSNGVFLCSKGGPSCFKVPVEKTNQGGFGGQLYKTVMQKCPPNSYSVFSELERSSHVFAVHFPSLPASVVRLTG AGDCLVGGILTSICAGLDIMQSVSVGTAVAKAAVEVEANVPSAFNLAAIAG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 1 | 363 | 363 | 8.19E-51 | ||
| PANTHER | 3 | 370 | 368 | 1.6E-160 | – | |
| PANTHER | 3 | 370 | 368 | 1.6E-160 | – | |
| Pfam | 5 | 263 | 259 | 6.2E-24 | ||
| CDD | 7 | 355 | 349 | 1.27285E-60 | – | |
| PRINTS | 8 | 29 | 22 | 9.1E-6 | ||
| ProSitePatterns | 39 | 63 | 25 | - | ||
| PRINTS | 178 | 193 | 16 | 9.1E-6 | ||
| PRINTS | 242 | 253 | 12 | 9.1E-6 | ||
| Pfam | 302 | 357 | 56 | 8.4E-8 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Kinase activity | Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule. | ||
| Molecular function | Phosphotransferase activity, alcohol group as acceptor | Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor). |
Expression pattern of LotjaGi4g1v0083600.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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