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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0096000 |
| Transcript ID | LotjaGi4g1v0096000.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein kinase; TAIR: AT2G23070.1 Protein kinase superfamily protein; Swiss-Prot: sp|O64816|CSK2P_ARATH Casein kinase II subunit alpha-4, chloroplastic; TrEMBL-Plants: tr|A0A151SKA6|A0A151SKA6_CAJCA Casein kinase II subunit alpha; Found in the gene: LotjaGi4g1v0096000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:12860574..12865719) extracted from Lotus japonicus Gifu genome v1.2.
ATTTTAAAAAATTCCCTTTTTATTGCGAGAAATAAAAATAAAAAAGTAAAAAGAAAAAGAAGAGGTTAAAAAAAGAACAA TGGGAGGAAAAAAATAGGGTTTGGAAAGCAGTGTTCGAAACCAAAGACATGGTAGAATGCTTTATATTGCAACTTTTTTA CAAATAATTTTTTCCTTGACTCTCATTCCCAATTTAATGGCCATAAGGCCCTTCCACCACTTCAACTTGTTGTCGCGCGA TAGATTGCTCTATCTCTTCCGCACGGCACAACAATTTCATTCTCCTCCTTCTTATCTTCTCCGCTCCCCCTCTTTCTCCC TCCGCCACTTCGCCGTCTCCGCCACCCCTGCTCCGCCGCAACCTCGCCGTCACCTCCCGCCGCCGCCCGACTCCATGGCG CAGAAGATTGGCAAATCCACTCGCCGCCCTGGCGCTTCCTCCAAAGCCAGGGTTTATGCCGATGTCAACGTCGTTCGCCC TAAGGAATATTGGGACTACGAAACCCTCACCGTTCAATGGGGGTGGGTAATCATGTTTTTCCCCCTTCAATTTTGTTATG ATTTTTTGTTTTAATTAGGTCTGATTCTGATTGATTTTCGTTTTGTTTGTGTTGTGGTTTTTGTAGGGAGCAAGATGATT ATGAGGTGGTGAGGAAGGTGGGTAGGGGGAAATACAGTGAGGTATTTGAAGGTGTTCACTGCATTGATAATGAAAAATGT GTCATCAAGATCCTCAAACCTGTCAAGAAGAAGAAGGTGAGTTTTTATTGCGCGGGTGTGTGGTGGTGGTTGCTTTTATA TTGGAATTTGATGAATCAATGTGTTGTGGTATAATTATCACAGACAAATCATGTTGTATGAACCCTAAGGCATGGATTTA CAATATAGAATAACAATTTTGTTATCAGAATGAACTGGAGCTGGTTAGTGATAATAAGTTAGTTATAGGGAAAAATATTC AACCATAGAGTCCGAAACTGTGAATGCATATAGTATATGCTGTGGTTGCAGCTGGAATTTCACTTGCTGACTTGCCAAAG TGAATGTATTTTGTTTATGTTATTAGTTTGTTAGTGGAAGTGTGTATTGTTGGCCGGCTGTTGGGAGGGGATATTTTCAT CTAAGTTTGCTTTCTCTTGATGAAGTCTTTAGAGTGATAGTGAAGGATGTAACATTCTTCTGGTTATAAATATATTTAAC TTTGACAACTTTTCTTATTTTTAATGCAGATCAAGAGGGAAATCAAAATATTACAGAATCTTTGTGGAGGGCCTAATATT GTAAAGTTGCTTGACATTGTTAGAGACCAACAATCGAAGACCCCCAGTCTCATATTTGAATATGTCAATAACACTGATTT CAAAGTGCTTTATCCTACATTATCAGACTATGATATAAGATATTATATCTATGAACTTCTGAAGGTAAGTTTAATGCTCT CATATTTTAATGAAAACACGAGCCTGCAACAATGAAAATTTGTCATTTTTTTCCTTAGATCTTGTTGGACACAAGATGTA CCAGACTCTTCATAACAAGGTTGATTGTTGTGCCTTTCATGATTTTCTTGTTGAATTAAATTTGCAAGTGATTAAGGTTT GAGCCATTTACTGCATAAATTTTATGAATACTTCTGTGACTGTCTTAGTTATAGTGTAGACATTTTAGTTGGTATCTGTA GATGTGCTTTAGATGTGTAAGGAACTCATAGAACCTACTGCATCATAGTTGCTCTTGTGATGGAAGACATCACCTTGTCT TCATTATACATTAAAAGTTCAAGAACCATTTCCTTTCATTTGAAATTTCTTGTGAGTCTAATAAACCCTTCTCATCAGAA TGGCTTGTATGCTCCTTTATCCATTTATTTCTCGTGAGATAATGTGGCATGTTTTCTATGCCAGTGTCTCTGGGTATGAT TTTGCAACTCTTTTTTCAACCTGGAAGATTTGGTTTCTTGGTGTTCATTGCACTTTTGGTATTTTTCATCCTTTGTCATT CAATAAAGACAAATTTGATGTAGTAGGCAAATATCACTCGAATATGTCAACTGTTTCACTGAAGTACTAGAAAGTTTTGC CTGGAAGGTTTAAATTGCAAAAGACAATGTATCTGCATATATGTCTCTTTAGTCTCTTTACGTGTTGTGCAGGTTTCAAT ATTATTCCATTAGTTATATCTGCTCACATTAGTTGTATCTGCTCATATATCCTGGTTGGTGTATGTATGATTGTGATGCT TTGTTCTGTCTGTTATCCATAATTGCAAGACAATTGTGATGCTTTGTTTGCATTAGATTATTTTACCAGTCCAGCCATTT TCAGTTTTTTGGCTATCAAATTGGAAGCGCTAAGTTAATTGAAACTTCTGCCAGGCTCTGGACTATTGCCATTCACAAGG AATTATGCATCGGGATGTAAAGCCGCACAATGTAATGATTGACCATGAGCAGCGTAAGCTTCGCCTTATAGATTGGGGGC TTGCAGAGTTCTATCATCCTGGGAAAGAATATAATGTTCGTGTGGCTTCAAGGTGCATTTGCCATTATATATATTTTTTT TCTTGGGAGGGGGGTTGTTTTAGGGGAGGGTTCACAATTAAGGTGTTTAGATGAGTATTATTCTCTATTGCGCTCGCACA TTTTTGATTGAGTAACAGCACTTCCTTACTTCCTTTATGCACTTGCCTTGCTTGTAGATATTTCAAAGGTCCCGAGCTTC TTGTTGATCTTCAAGACTATGATTACTCTCTAGATTTATGGAGTCTTGGTTGTATGTTTGCTGGGATGGTAAGCAACAAA CTTTCCTTTAAATGAAAATTTTCTATACTTCCACTAAAAGGTAAACCTCTGAATATTTACCCATTGCATGCTAAAGATTA ATTTCTCCTTTTGAAGTTAATGTATAGGTCTGTTTACCTGAGCTTTTTTACAGATATTCCGTAAGGAGCCATTCTTTTAT GGGCATGATAACTATGATCAACTGGTCAAGATAGCTAAGGTAAGTGAAGCCTGTAAGTGGACTTGGTAGCATTTGTGCTA GATTGTCAGCTTATGGTTGATAACTCATTACTGCTTTTGCTCAGGGTCTGTGACGTTTATTTGTAACATTATGTTCCCCA CTGGATATATTATTGTATGTTGTAAGTGTGCATTTTTCTTGTACCTTGTGCCAATTTCTTTCTTTCTTTCTGTTTTTTTT TTCCTCTAAAGATTTATGATAGCTATGATCAAGTGGTCAAGATGGCTTAAGTAAGTTAAGCCTGTAAGTGGGCTTGGTGG TGTTTGTGCCAGATAGTTGTGCTGTGTGTTTGGATGATAATTGGCTACTGCTTTTACTTTTTTTTATCTGCAACCTTATG TTTCACATTGAGATTTTGCTGTGTTGCAAGTGTGTATTTTTCTAGAGTCTTGTGTCCTTTTTCTATTTTTTGGCGTTTCC TCTTCAATTATATCCCCCTTAGTGCTCCTGTGATAAAATTCTCTTGTTGTCAAGAAATGAAATGTTGTTGCCTTTTGAGA ATGCCTTTGTTTTGTTACAACTTTTTCAGCTATGGATCTTGGCAGAAAATGCAGCTTCTTTGTTCATCTATTTATGTAGT ACTTATTCATGCCTGTGAAAGTATTCAGAATTCTGAGTTAGATTTAGAATTGCAATTCTGTTAAAGATGTTTGCATTGTT CATATGCAGAAGCAACTTAAACAAATATAGGGGATTGAGAATTTTAGAGTGATGACATTTTTCTTCCCTCTTGCAATAGG TACTTGGGACAGATGAATTAAGTGCATATTTAAATAAGTATCGAATAGAGTTGGACCCAAATCTTGCAGCACTTATTGGG AGGTATATTGGGGTTCTTTCGTAGTTTACTATATATGTTGCGTTTGTTAAATCAAACTATCATTATTTTAACTAATATAC TCTCAACACTGACAGGCATAGCCGGAAGCCATGGGCAAAGTTCATTAATGTAGAAAATCAACACTTGGCAGTTCCTGAGG TAGTATGCATTGTAATCATGTTTTTAATCTACCCATAATGTCATTGATTCTTGTGCTAAGTTTACACTTTTGTAAAGGCT GTGGACTTTGTTGACAAGTTGCTACGATATGATCACCAAGAACGCCCCACTGCTAAAGAAGCCATGGTAAATTCCTGATC TTTTAGCATTTTTATTACTGTGTTGGCTGACTTCTGATGTCAATTTTGCTACATCTGTGGCTTCCTCTCTGTACGATTCC TGCCTTGTTTGGAATTTTGTTTTTACAATCTTTGTGGAAAAAAGTGTTGGGGCTTAAGATCATTGCACTGCAATATGATG CTTCTAACTGACCTTATAGTTGGTTCCTAATTCTATGCTTGGTTCTCTAGTAAAGTCTATAGTTAGGACTTGGATTTTTG TTATTGTCAAAAAGTTCTGTGAAAGCACTACATAAGAGATAATAAGTAAAAGTATTGAATATATTAGGAACTACAAAAGT TATTTTTTTCTTTAAACTTCACGTTTTCTAGTAGGACAATATTAACTATTTTATTTAAATGATGTATTTTTCTTATCGTA TTTTGCTCAAATTCAATGGTATGCCTATGCCCATTCCACCCAAATATTTGGCAATATGAACTCATTTTATAAAATATTTG ATAAACAAATCTCTATTGCTGTGCAGGCACACCCTTACTTCAATCCAGTTCGAAGTGCAGAAAGTAGTAGAACTCGAACA CATTGAGTTGCTGATGCTTGTTGAGCTATGGTGCTCACTCTTGATCAGGGGTCTTCCTCTAAATCTCAACTTTTATTTCT GGTGTAACTTGCTTTTAGGAGATTCTGCCCCTGTTCTGTTGTAATGCTCAGTTTCATTAGTTTTTTTTCCCTAACTTGTC CTTTATTTTTTGGTTTTGCTATTTTGGTGGATAATTCAAGTCTCAACAATTTCATTTGATTGTTGTGTGCTCCAAATTTG GAAGTGTAATCTTGATTCAATTTCAGTTAAATTATACAATTGGGAAAATTGTAAGGTTTTGTGATTCGAATGATTAACAA TAGGAGTGGTTGGCCATTGAATCCAATTATTATTTTTTATTATCTAAAATCTTCATCTTTGACTTAGGATCGATGAGTTC TTAAAAGAAAGAAGAATAGAACAAAG
CDS sequence (LotjaGi4g1v0096000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTTTATATTGCAACTTTTTTACAAATAATTTTTTCCTTGACTCTCATTCCCAATTTAATGGCCATAAGGCCCTTCCA CCACTTCAACTTGTTGTCGCGCGATAGATTGCTCTATCTCTTCCGCACGGCACAACAATTTCATTCTCCTCCTTCTTATC TTCTCCGCTCCCCCTCTTTCTCCCTCCGCCACTTCGCCGTCTCCGCCACCCCTGCTCCGCCGCAACCTCGCCGTCACCTC CCGCCGCCGCCCGACTCCATGGCGCAGAAGATTGGCAAATCCACTCGCCGCCCTGGCGCTTCCTCCAAAGCCAGGGTTTA TGCCGATGTCAACGTCGTTCGCCCTAAGGAATATTGGGACTACGAAACCCTCACCGTTCAATGGGGGGAGCAAGATGATT ATGAGGTGGTGAGGAAGGTGGGTAGGGGGAAATACAGTGAGGTATTTGAAGGTGTTCACTGCATTGATAATGAAAAATGT GTCATCAAGATCCTCAAACCTGTCAAGAAGAAGAAGATCAAGAGGGAAATCAAAATATTACAGAATCTTTGTGGAGGGCC TAATATTGTAAAGTTGCTTGACATTGTTAGAGACCAACAATCGAAGACCCCCAGTCTCATATTTGAATATGTCAATAACA CTGATTTCAAAGTGCTTTATCCTACATTATCAGACTATGATATAAGATATTATATCTATGAACTTCTGAAGGCTCTGGAC TATTGCCATTCACAAGGAATTATGCATCGGGATGTAAAGCCGCACAATGTAATGATTGACCATGAGCAGCGTAAGCTTCG CCTTATAGATTGGGGGCTTGCAGAGTTCTATCATCCTGGGAAAGAATATAATGTTCGTGTGGCTTCAAGATATTTCAAAG GTCCCGAGCTTCTTGTTGATCTTCAAGACTATGATTACTCTCTAGATTTATGGAGTCTTGGTTGTATGTTTGCTGGGATG ATATTCCGTAAGGAGCCATTCTTTTATGGGCATGATAACTATGATCAACTGGTCAAGATAGCTAAGGTACTTGGGACAGA TGAATTAAGTGCATATTTAAATAAGTATCGAATAGAGTTGGACCCAAATCTTGCAGCACTTATTGGGAGGCATAGCCGGA AGCCATGGGCAAAGTTCATTAATGTAGAAAATCAACACTTGGCAGTTCCTGAGGCTGTGGACTTTGTTGACAAGTTGCTA CGATATGATCACCAAGAACGCCCCACTGCTAAAGAAGCCATGGCACACCCTTACTTCAATCCAGTTCGAAGTGCAGAAAG TAGTAGAACTCGAACACATTGA
Protein sequence (LotjaGi4g1v0096000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLYIATFLQIIFSLTLIPNLMAIRPFHHFNLLSRDRLLYLFRTAQQFHSPPSYLLRSPSFSLRHFAVSATPAPPQPRRHL PPPPDSMAQKIGKSTRRPGASSKARVYADVNVVRPKEYWDYETLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCIDNEKC VIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQQSKTPSLIFEYVNNTDFKVLYPTLSDYDIRYYIYELLKALD YCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGM IFRKEPFFYGHDNYDQLVKIAKVLGTDELSAYLNKYRIELDPNLAALIGRHSRKPWAKFINVENQHLAVPEAVDFVDKLL RYDHQERPTAKEAMAHPYFNPVRSAESSRTRTH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 3 | 3 | - | – | |
| Phobius | 1 | 22 | 22 | - | – | |
| Phobius | 4 | 17 | 14 | - | – | |
| Phobius | 18 | 22 | 5 | - | – | |
| Phobius | 23 | 433 | 411 | - | – | |
| MobiDBLite | 70 | 100 | 31 | - | – | |
| PANTHER | 79 | 431 | 353 | 1.6E-239 | – | |
| PANTHER | 79 | 431 | 353 | 1.6E-239 | – | |
| SUPERFAMILY | 105 | 422 | 318 | 2.16E-78 | ||
| CDD | 115 | 419 | 305 | 0.0 | – | |
| ProSiteProfiles | 134 | 419 | 286 | 42.888 | ||
| SMART | 134 | 419 | 286 | 3.6E-73 | ||
| Pfam | 134 | 419 | 286 | 5.9E-65 | ||
| Gene3D | 134 | 210 | 77 | 3.0E-109 | – | |
| ProSitePatterns | 140 | 163 | 24 | - | ||
| Gene3D | 211 | 419 | 209 | 3.0E-109 | – | |
| ProSitePatterns | 247 | 259 | 13 | - | ||
| MobiDBLite | 413 | 433 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi4g1v0096000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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