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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0098000 |
| Transcript ID | LotjaGi4g1v0098000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pimeloyl-[acyl]-carrier protein] methyl ester esterase; TAIR: AT4G37470.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q10J20|D14L_ORYSJ Probable esterase D14L; TrEMBL-Plants: tr|I3S3D1|I3S3D1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0098000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:13257919..13260259) extracted from Lotus japonicus Gifu genome v1.2.
GTTTTATTAATTTTTGAAAAGGACATATAGAGGAATATTTGTTCGAATAATCATTTTTATTTTGGTTTGGTGGTTCTCTC CATTGGCGTTGGTAGATCAATTCCTTCTCTGGCCCAAATATATATGGAGCAATATATAGTCTGAAACTCTAGAAGACTGA AACAGAAACTTAGTTAATCAAATCAAACCATGGGGATAGTGGAAGAAGCTCACAACGTCAAAGTCTTAGGATCAGGTTCA AGGTTCATAGTTCTAGCTCACGGTTTCGGCACCGACCAATCCGTGTGGAAACACCTTGTCCCTCACCTCCTCAACGACGA CTTTCGCGTCCTTCTCTATGACAACATGGGAGCTGGAACCACCAATCCTGATTACTTCGATTTTGACCGCTACTCAACCT TACAAGGCTATGCTTATGACTTGCTCGCCATCTTAGAAGAGCTTCAAGTCCGTTCTTGCATCTTTGTTGGTCACTCAGTT TCTGGCATGATTGGTACCATTGCTTCAATTTCTCGTCCTGATCTTTTCTCCAAGCTCATCATGGTTTCAGCTTCGCCCAG GTAATTACTACGATAACAGAACTACTAATTCAATTCTCAATTATTTGATATTTGAAATTGCTGTTTTGCACACGTTGCGG TTGCCACTTACTCGGTTCTGAGAATTCTATGCGAATCTCTCTCGGTTAAGGTATAGAATCACATGGAGATAACATGGTAG CGGTAAAATGTCACGACTGAGCTTCAGGTTCCATGGAGTAGTGGAGTACCTACAGAAAATACTCTAATGCTATATTTGGT TGGGGGAAGAAAAAGAGAAAGGAAATAAAACACGGAAATCGAGAAGTGAATTTAGACTAATTTCTTTTTCTTTTCCCTTC CTCCAACCAAACAAAGCCTAAGTCAGTGTTTGAGTGAGAGTAGTTCTCAGAAACTTAAGTAGAATTCGTAAATTTCTTTG AATGAAAATATTATGTAAATAGACTATAAATCCTATATTTATAGGGTTAGAGTCACTAACAACTGTCTCAACAAGTGTGA GGGAGACCCCTTAAACAAGGGGTTTGAGTGAGCAAGTGAACTTTACATTAACTTATTAATCTCATGGCCGAGCGAGGCGG GGAGCTCCTTCTTAAGTGTTCTGCCCGACCTTTAGACGGATGCTCTTACGCTAGCCTTTTGGTCCGTTGAGACATCCACG CCAAGAAGTCAATGAGAAAACCTGCATTGTGTAATTACTAGTGTGGGTTGATGTAACCGCAACTGTGATAGAGATGCGGA TTCAAGGACTCAAAAATCCATTACACTATTGCAATTTAAATTTTATTTAAATGTGTACATCATATAGTAGATTAGTCAAT TAATTTACTAATTATATATGTTGCGTGTGTGTTTTGGTTTTGTGGGTTAAGGTATTTGAACGATGTAGATTACTTCGGAG GCTTTGAGCAAGAAGATTTGGACCAGTTATTCGATGCCATGGCGGCGAATTACAAAGCATGGTGTTCAGGCTGGGCCCCG ATGGCTATCGGAGGAGACATGGAGTCAGTGGCGGTGCAGGAATTCAGCAGAACCTTGTTCAACATGAGGCCAGACATAGC CTTAAGCGTATTGCAGACAATTTTTCAAAGTGACATGAGGCAAGTACTAAGCCTGGTAACTGTGCCATGTCACATCATAC AAAGCAAGAAAGACCTGGCGGTTCCGGTAGTGGTGGCGGAGTATCTCCACCAGCATGTTGGCGGTGAGTCTATCGTGGAG GTCATGTCAACGGAGGGGCATTTGCCGCAGCTGAGCTCGCCGGATATTGTTGTTCCGGTGTTGCTTAGACACATTTGCCA TGATATTGCAGCTTGAGTACTTGAGCCTTTGACCGATAGTGGCGGTTCGTGGTGGTGGATGGTCCATTATTGAGGGTTGA TTTTAAACAAATAAAATTGATCTATGAGGGTTACTTTATGATTTGTGTCTGTTTCGTAAGAGATCAAAGGAAATGGAGTT GGCGGCACATGTTGCCTTGAACCGTGCATTGGTGCTCTTTGTTTTGTATATATGTGCTATTTAATTGTGGTAGGTGGTGT GCTCCAATAGTTGTGGGCAACGAATGTTTATATTGTATTATGAGGGTGGAGGGAATCAAGTGGCAACAAGCATCTGCCAA ATCAACTTGTAAACTAATTTTCAAATGGTTTAGAAAATAAAAGCATGGATCATTTCACACTTTCACATCAAAATTTTATT CACGCTTGGAGAAATACAAAAACACAAGAGAGAAATATGATCAATAGATAATGTGGCAAGAAAATAAGCTAAATTATGCA AATAGAAGAAGAGAAAACGAG
CDS sequence (LotjaGi4g1v0098000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGATAGTGGAAGAAGCTCACAACGTCAAAGTCTTAGGATCAGGTTCAAGGTTCATAGTTCTAGCTCACGGTTTCGG CACCGACCAATCCGTGTGGAAACACCTTGTCCCTCACCTCCTCAACGACGACTTTCGCGTCCTTCTCTATGACAACATGG GAGCTGGAACCACCAATCCTGATTACTTCGATTTTGACCGCTACTCAACCTTACAAGGCTATGCTTATGACTTGCTCGCC ATCTTAGAAGAGCTTCAAGTCCGTTCTTGCATCTTTGTTGGTCACTCAGTTTCTGGCATGATTGGTACCATTGCTTCAAT TTCTCGTCCTGATCTTTTCTCCAAGCTCATCATGGTTTCAGCTTCGCCCAGGTATTTGAACGATGTAGATTACTTCGGAG GCTTTGAGCAAGAAGATTTGGACCAGTTATTCGATGCCATGGCGGCGAATTACAAAGCATGGTGTTCAGGCTGGGCCCCG ATGGCTATCGGAGGAGACATGGAGTCAGTGGCGGTGCAGGAATTCAGCAGAACCTTGTTCAACATGAGGCCAGACATAGC CTTAAGCGTATTGCAGACAATTTTTCAAAGTGACATGAGGCAAGTACTAAGCCTGGTAACTGTGCCATGTCACATCATAC AAAGCAAGAAAGACCTGGCGGTTCCGGTAGTGGTGGCGGAGTATCTCCACCAGCATGTTGGCGGTGAGTCTATCGTGGAG GTCATGTCAACGGAGGGGCATTTGCCGCAGCTGAGCTCGCCGGATATTGTTGTTCCGGTGTTGCTTAGACACATTTGCCA TGATATTGCAGCTTGA
Protein sequence (LotjaGi4g1v0098000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGIVEEAHNVKVLGSGSRFIVLAHGFGTDQSVWKHLVPHLLNDDFRVLLYDNMGAGTTNPDYFDFDRYSTLQGYAYDLLA ILEELQVRSCIFVGHSVSGMIGTIASISRPDLFSKLIMVSASPRYLNDVDYFGGFEQEDLDQLFDAMAANYKAWCSGWAP MAIGGDMESVAVQEFSRTLFNMRPDIALSVLQTIFQSDMRQVLSLVTVPCHIIQSKKDLAVPVVVAEYLHQHVGGESIVE VMSTEGHLPQLSSPDIVVPVLLRHICHDIAA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 270 | 270 | 4.1E-165 | – | |
| PANTHER | 1 | 270 | 270 | 4.1E-165 | – | |
| Gene3D | 1 | 269 | 269 | 2.0E-71 | ||
| SUPERFAMILY | 10 | 265 | 256 | 6.14E-44 | ||
| Pfam | 20 | 258 | 239 | 4.2E-15 | ||
| PRINTS | 44 | 59 | 16 | 9.4E-5 | ||
| PRINTS | 92 | 105 | 14 | 9.4E-5 | ||
| PRINTS | 106 | 119 | 14 | 9.4E-5 | ||
| PRINTS | 210 | 224 | 15 | 9.4E-5 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0098000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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