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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0100900 |
| Transcript ID | LotjaGi4g1v0100900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Rer1 protein, putative; TAIR: AT4G39220.1 Rer1 family protein; Swiss-Prot: sp|O48670|RER1A_ARATH Protein RER1A; TrEMBL-Plants: tr|I3SRP0|I3SRP0_MEDTR ATRER1A-like protein; Found in the gene: LotjaGi4g1v0100900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:13840893..13852327) extracted from Lotus japonicus Gifu genome v1.2.
AACACAATCAATCAGTTTTCCAAAACATAACTCCAAAAAAAGTCTGCTCGAATGTGTAACGTTCCATCAATTAATAGGTG CTCGTCATCCTCTTAAACAAGTCATTACTCCATGCCGTGTGTATTCCCTCAAACACCTCTTCTTCATCCTCTCACCTATC TTCTTCACCTACAGTGTTGAAGAAATCAGCAAATAAATTGCAGAGTTTTGTCAAGGCTTGCGCTTTACCATGGAGAAGAC ATAGGGTTCTCGCTGATTGCCCGTTGATGTACGTTTTCTAAATACTGTTCACTTTCCGTTATCATTAGTTTATAGCCCTC TGTCTCTCATCTCTTTCTTTTTAATCTCTTTGTAAGCTCTCTTATTTAGCACTTATTGTGCATCTAATATATGCATACTG GGTTTACACGAAAAAACCTATTAACATTTCCTTTTGTTGCAGAGAATTTGTGGGTGAAACATCCCTTTCTGATTTTCATC ATGGAACCAGCCAAGCTATCAACCCTACCAGTGGGGGGGGGGGGGGGGGAATTGCTTCATGAGTAGACATTACCTTCATA GGGTAAGCTATCCACCATTTTTCTTTGTTTAGTATTGGCAATACCAGTAAGTAACTGAAGCTATTAAAATAATGTGGAAT CTAGGTACCATGCTTGGTGAATCATGGTTGTTTACAAGCTTTAGTTGTTGACACTGCGTTTTGATTTGAATGCATCAATT TCAGCCTTCACATGTTTATCTGAATTGTTTGCCTTGTAGCTTAACTCTTCCTTATTTTGTTTAAAAGCCTACCTAATTGA GAGCGTATTTAGATTAGTGGTCACACGAGATAAAATTAAAATGTTAACAAAAGAAGCTATACTATGCAACTTCTTCCCAG AAGAATTGATTATGAGGCTTCTCACAGTAGAATCAAATACTTCATGAGTGGTTAAAGATGTGGGTTGTGAATTCAATTTC CATAAACTATTCCCCAAATTCATAAATAAAAGGTAGCACTTAAGAATGTAGTTTTAAGCATGCCTGCACATCTACTCACT GTTTGACCAGCACAAATTTTGGTTAGATGTATAACTATGTGCTACTGGTACATAGTATGTCATTGTAGGAATTGAATTGA AATTTACAACCTGTCAACTTTTCCCTAATGAGTTTCTAGATTGTGAACCTGCGATTTCTAAGATTTCTATGATTGAGACT GTGTCCGACTTGACAAATGTTAGAATTTTGGTATGGTTTGATTTCGTTTGAGAAGTAATGTATGCAGTAATTTTTTTTAG TAAAGAAATTGACAGTGGATTTATGATCTGCGTTTGTAAGATGGAATTTACATCTAACTTGTGTACACCGTTTAAACTTT GTGATACTAATGACCGTGCAATCAATTGCTTGTCAAAGGGATATTCCACAAAGAATGCATTCTGCTAACCAACTTCATTC TCCATGCTATAAAAAATGCATTTTTCGTGCATTCTCTCATAATCGACATATATTGCTTGTAGGAATTTATTGTTATACCT AGGTCGTTTGTCAAAGACTTTCCAGATTTGAGGCAATTTGGCAGCGTCCTTTTGATTGATCCTGCAGGAAATATTTTTGT AATGTTTTTCAAAAATGTGTCCATTGCTTTTTGAAGGTGCTTTCCAGGAGATTCGTCAAACAAAACCACATTAATCAAGA TGTTATGGTGCACTACACATATAATGGTGTGGGGGAGTTTAGCATCAGGATCTACTACGACGAGAATACCGAGGTAAATT ATGAAGGGAAACTGGAAGTGGCTCCCAATGTGGAAGGGGAGCTCGCTTGGTTGAATAATATCACCAAGCCAATGTCATTC GGAAAGCAATGCCTGGTACTATTCATCCCACTATCTTTTTCATATTACCAAGTATAACATTCCAGTAAGTGATTTTTTTT CTACATTTTTCCATCCTATCCCTACCATTGTTGTGTTTGCATTTGGACTTTTTTTAAAAGGTGGCGATAAGATCGAGAGT TGTGTATAGGTTAATTTTTTATGTAGAAAGGTGAGTGTTAATGTTTTTCTGCATTTATGTTGCATTCAAACTTCATGTCG GATTGCGGTAAGTAGGTGTTAATGTCTATTTGCATTTGGAATTTTTTAAAAAGTGATGATAAGATCGAGAGTTGTGTGAG GTTAATCTTTTATGTGGGGTGAGTGTGAAGTTTGTCTGCTTTCGAACTTTATGTTAATTTCTTTTGTCGGATTGCACATG GTACTAGTAAAATTAAATAAGGGTGCTTAGTAACATTATACTATAAATAATTGTTATCTTACTCTTTGTGATACAACTTT AAGCAACAATATTTGTGGAACGGATGGAGTAATTTCTTATGTCGGATTGCGGTGAGTGGGTGTTAATATTTGTTTGCATT TGAACTTTTTTAAAAAGGTGATGATAAGATCGAGAGTTGTGTATAAGTTAATTTTTTTTGTGGTGGTGAGTGTTAATGTT TTTCTGCATTCATGTTGCATTCAAACTTCATGTTAAATTTTCATGTTGGATTGCGATGAATGGATGTTAATGTTTGTTTG CATTTGGACTTTTTTAAAGAGGTGGCGATAAGATCGAGAGTTGTGTATAAGTTAATTTTTTATGTAGAGAGTTGTGTATA GGTTAAATTATTTAAACTTTAAATCATAAAAAATTGACCTATACACAACTCTCGATCTTATCGTCACCTCTTTAAAAAAG TCCAAATGCAAACAAACATTAACATCCATTCATCGCAATCCGACATGAAAATTTAACATGAAGTTTGAATGCAACATGAA TGCAGAAAAACATTAACACTCACCACTACAAAAAAAATTAACTTATACACAACTCTCGATCTTATCGTCACCTTTTTAAA AAAGTTCAAATGCAAACAGATATTAACAACCACTCACCGCAATCCGACATAAGAAATTACTCCATCCGTTCCACAAATAT TGTTGCTTAAGGTTGTTTCACAAAGAGTAAGATAACAATTATTTATAGTATAATGTTACTAAGCACCCTTATTTAATTTT ACTAGTACACACCATGTGCAATCCGACAGAAGAAATTAACATAAAGTTCGAAAGCGGACAAACTTTACACTCACCCCACA TAAAAAATTAACCTCACACAACTCTCGATCTTATCATTACTTTTAAAAAAAGTCCAAATGCAAATAAACATTAACACCTA CTTACCGCAATCCGACATGAAAATTTAACATGAAGTTTGAATGCAACATAAATGCAGAAAAACATTAACACTCACCTCTC TACATAAAAAATTAACCTATACACAACTCTCGATCTTATCGTCACCTTTTTAAAAAAGTTCAAACGCAAACAGACATTGA CACCCATTCATCGCAATCCGAAATGAAAATTTAACATGAAATTTGAATGTAACATAAATGCAGAAAAACATTAACACTCA CCTCCAAATAAAAAAATTAACCTATACACCACTCTCAATCTTATCGTCACCTTTTTTTTTAAAAAATTAAATGCAAACAA ATATTAACACCCACTCAACAAATCTGACAGTAATATCGGGTAGAGACACAAACGTGTCTGGGAATGCATCAATGGGAAAG TAATTTATTAGACGGACTTCAGTCTTGAATAGAAAATCAATCTTGTAGTTATGCCTAGTAGTCTTATAATCCCCATCATT ATCAACCAACACGAAACATGAAACACTGTAAACGTGACCGTCTATCAAAGACTTCTCAAATTTATACATTAGATCTTCTT AATGGTTGCATGAATCATATTTCCCTTCAAACATAGAAAACGTGTCATCAGAACCATATGATCAAAACGAAAAAAGAGAG AGGAAATTCTTCAGAATTTCAAACCTTTAATTTGCATCCGCCATCATAACCATCTCAAGAGAGTGGGGCAGTTTTGCATT CTTGAAATCCTAGTCGTACCATATTCTTATGACATTGACAATAATGCTCCAATTTTCATTTTCACAGTGAAGCTCCATGA CATCATTAAACACAACAACCATTTCAAAGAATGTTATTAGCTCAAAATCGATTCAAGAATTTTGTATGTTGTTGGGTTTA AGCAATGCAAAAATCGAGCAGTATTTATAGATGGAAAAATCAGGGCTTTATTGAAAACACAGCGGAGAAACAAACCAATG TGCTAGCATTTCTCTTAATTTTTTTGGGTTACATAGGAAAGTAAAAAACGAAGTAAAGAACTACTCTAAAACATCATGTC ACAGCGCAGCAACAAACCCCTGAAGGAGGAATCCCCTAGATGCGACAAGATGAACCTTCATGAGAGGCTCTGCGTGCAAG CAGATCAGCTGCATGATTTCTACCCTGTCAATGGCTATGAAGTAAACATTCCAATCGCAATCAAGCATGCCTAAATTCCT GTTATAGTATCTCTCGCCCAAAACGTCCGCACATCTACTTGGTTTTGAAGGACATCCACCATGCCGGAACAATAAGAGGA GCACAAAATGTTCTTAAGCCACAAGTCCCAACAATGCTTCAAGCCCGCTTCCACCACCAAAAACTCTACTAAGAAAGTGT TCCAATGTCCATAACCTACCGAAACGCCTAAGATCCATTGACCCGTTTTATCCAATACCATCACAGCGCATCCCATACGG TTAGTTCCTCGATTCCAACTCCCATCCGTAAGCACTTGCATCATCGTGGCTCCTCCCCCACTTGTGCCTCCATTACTAAT TGCAGTTTGCCGAATGAAGTGTAGGGGAGATTGCATTGACTATAGGCCAACATCTCTAACTTAATTAAGAGAATTATGGA GAGATTTATTATGGTCTTCTAAAAACTTGTGCAAGGTTACACATTTGCTTTTGGTGCTTGCTCTGGTACCTTGAGTCAAT TCAAGGCGTGGTACCCAAAATGAGTTAAATTAGTTGTAAAAACTTATATATTCATTAAAAAGTTCGATTTGATTATATCA TAGTAATGTAGTATTCCATTGCCAAAGATGTGAAATTCGTTTGTTATGATTTTCAACCTTTGTTCTTCCGTCAAATATGG TCATTTGACGCGTATCGCCACCATCATCGTTCGTCTTCACTACTCATCCCTTTTTTATTAAAAAATGAATTATATGAAAT AGAGCTAATTGAAAAGTAAAATAAAATTTGAAAATCTAAAATTTACATTGAACAACATAGTAATAATCTATTAAATAACT TAATGTGGGTATCACACCCAAAAAATATTATGGGTACCGCATAATTTGCCTTTGCTTTTTGACCTGCAGTAATAGGTTTA GCAGGTTTTAAAAAAAAATAAAAAAACATATATATATTAGTAAATTAATTAATAAAGGATTAGGTTAATTAGTGAATAAA TTATTCTGCTCCTTCCTGATCTGGGATTAATTTCTAATCCCTACCCTTCATCTTATCTTCACGGTAATCAACCTATCTTC AACCTCATCCATCATTCTTCATCTTTCAACCACAACCTAAACCCTGATTTTTCAAAACTCATTTGAAAATGACAATAGAA ACCAAAATCTGAGAACAAAAAATAGCAACAAAGCTCTCTATGTCCATAATCTGAGTTTTGTGCGGTTGAAAGAGGTGGTG GTTGTGATTGATTTGGGATCAAAAAAAATATTTATTCAATCAAAGCCAAGTGTTACAGAAGAATCATCACCATGGGATGC AACAGAAAAGACAATATTAGCAATTAAAAGCAATCATCATCGTATATCCATGAAGTTTGAATCTGTACGCCTCACTTGAT AAAAATTAGAACCAGATAATAATCTTCATGGAGAAACTGCCATTCAAGAGTAAGGAGATCTCTGTCTCATCAACCCACGA AGCAAAAAACCCAGATCTAACCCCAGCAATCCATCCCCACCTGCAACCGAAACCGAGAACCCAGATCCACAACTTCAACT TCAACTCCAGAAAACTTCAAATGCAAAAAATCCAGAAACATGGCTTTGAGTTTCTCCTTTTCTGCTATAGCCGCCACCTC CTCTTCTCCCATGGCTACGCCACCACCACCATCTCCTTCTCTTCCCTGAACTCGCGCCATCTCCTTTCCTCACCCAGAAT CACGCACCACCAACTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTGATCACGCAGGAGGTTGTCAAC GAGACATGGAAGTTTCGCGAAGGTGGTAGATGGGTCGATCTGTGGTGAGGGTTCGACGACGGTGGCTGGTGACGGTGAAG GAGGCAGATCACGAGTTCCGATCCGCTGCGCCTCTCTCGCTGCTCCTCTCTCGCGCCGCCACAATCTCTAGATCTGAAGA AGAATTCCCAGATCTGGTTCGATCTTGCTAGGTTGAAGTGTAGTGCGGTGGAGTTCGAAGAAACGGCTCTGGAATTGGTT GAGGATGGTGATGGAGGTCCGTGATTTTGAATGGAGGAGAGGAGTGGTGGCCGGCGGTGCACCACCATCACCATACCCAG ATCTGAAAACTCATTTTTTTGTTTCATTCTTCAACATTCCTGTGTGATGAGGAGGGGAGGAAGATGGAAAAGATTTGGGG TTGAGTTTCAGATCTGGGGTGAGGTTCTGAAATATGGGTTGAAGAAAATGATGTGAAGAAGATGAGTGATGAAGATGATA AGATTAAGAATAAGTGTTTTTTTTTACACATTAAGGATAAATGTTTGATTAAGAAAATATGATTTTTGGAATTTTTTTTT AAAAAGCTGTTATAGTGGATTAAAATGCTTTGGTGTAACTTTACACAAGTTTTTAGAGGACCATAATAAATAAATTTTTC CGAGAATTATCCTTGAAAAAAATGCATTATTTAGCATTGAATTTATTAATAGCCGTACTAGCAATAAAAGGAGAATGAAA AAGGAGAAAAGGCAATAAAAAGAAATAAAAGTGCAAATAATCGACGACCAAACTCGCCCGCAAACCGAGGAGAGAGAGAA GGGGAAATTGTCTATCACAAACTGCCAGTGGGTCCCAGCGATGGATGCGGAGGCGGAGGCTACATCCCCGGCGGCCGCCG TATCGCGGTGGAAGTTCGAGGTGTCACGGCGGTACCAACACCTCCTGGACAAAGCGACGCCGTACGTGGCGAAGCGGTGG TTGGGGTGCCTGGTGGTGGCGCTGGTGTACGCGCTCCGCGTCTACATGGTGGAAGGATTCTACATCGTTTCCTACGGTCT CGGCATTTACATCCTCAACCTTCTGATCGGCTTCCTTTCCCCTCAGGTCGATCCCGAGGTTCAAGATTCCGGTGGCCCCT CCCTCCCCACCTCCACTTCCGACGAGTTTCGCCCCTTCGTTCGCCGCCTCCCGGAGTTCAAGTTCTGGTAACTTCCCGTC CTCCTTCTTTCGCTTTCCCAATTCGCCATTTCTGTTTCTAGGGTTTGTTCCTCGATTCAATTTTGGATTTGGGATTTTAG ATCAATTCGGACAATCTTGGATGATTCGATTCGATTAGTTTGTGATGATGAGTTATTGGTTGAGTTGTTGTTGTTCTTAT ATGTCAATGGTGTAGAAAATTGAAAATTGAGTATAGATGGAAAATCAATATAGTGCATGCAGTTTGAGGTTGTGTTTGAG GATTCACCACCCACCCTTGCTGCTATAATATAGAGGAAGTGATCAAGTGTAAGTAGCCGAGAAATTGGCGCGATCCGTTG TGCTGCAGCCTCTGCATGGTGATCCCCTGAAAGATCTGTTTCAGCATTACAGAACCAAACTAGGGTGATTCTGATTAATC ATGGTTACCACAACCCGAATCCAGACCCTAATTCCAAGGCATATTTGTTCACATAGTAAACCTAGGAGACCTAGCTAAGT TGAAAGTGAGTATCCCTCAACTCTGCTCGGTCCCCTTCTTATGATACTGGTATGGTTTGCACCATTTAATGAGTGGACCT CCATAGTCATTGTGTCAATTATGATGTTCCTGATTTCTGGCATTCATTTAATTCTCAATGTAACGACATTCAGCGGAAAT TTTGGCATGTCGGTCGGCCTTCATGAAAGAAACACTCCCTTCCAGATCCCGAGGATGTCGCTGAAATCACGCAACATGGT CGGTCACCTTACATAAACAATATTCATTGCCTGTGTACTCTGTCTAATCTATATCTCCAAAGCTCCTCGATGCTATGCTG GCCATCAAACTAATTCTAATTTTCCAAATAATAGCACAGATTCCTTATCTATTTGTCTCTGCAAATTGTCTTTGCAGCTA AAGAGTAAGCCACTCATGGTTGTCCAGCCGAGTTAATAGGACATTGCTTTGGTGCTAACAAAGGAAGCTAAGATCAACGA CACTGACCATCTCTTTTAGGTGGCTCAGTAAAGCTTTTACCTTAAATCCATTAGCGTTTTCTTGCCGTTCATCAAGCTGA CAATCTATTTGTCCCCTTACATCTATTGGGACAATTAAATGCCCATCATGTACAAGTTTTTCCTTGTTTCAAACAATTAG TTATCTGAAGAAAGAATTTTTTGCAATCTAAGGAAATTAAATATATGTAATATAATTCCCTTGCATTTCAAGTTCTTTTA AATTCTGAGCCATAGATACAAATTCTTGAGGCTTCGATACATATCGCAGTATGGATCTAAAATGAACCTGAATCTCATTT AGTATCTCCGATTCAGTGATGAGTCATATGATTTACGGTTCGCGGGTGAATCTTACGATTCAAAGTTGCGTGCAGGTTGC ACTTTAGTCGGGTTGAGTTGTGTGGCCAGTATAGGTTTATGGTGCTTTTTTGAAGTTTTACAGAAGAGGCCAGAAATGGC CATTCTCTTAAAAATCAAACCCTACTTTGGTCCTCAGTCCTCACTACTATCGATTCATGTGACATTTCTGGCTCACCAAA GAAACATGTCTCCTTTGTTGTTTCGGTCCCCTTGTGCTTCTCTCCATCTACTACTGAGTTTCCTTATGGGATAATTGCTT ACTGCTGTTGTGAAATTTGTTATTGCTACAGATTAGTGTTGACCTTGGGGATGGTGAATGATTCAATTAGTTAGATTATA ATTATTTACTAGAATCTAAGTATATGTAGTAGGAAAGTAATTTGCATTTTTTTCATCTTATTAAGTATAGGCACCCACTA TTTTTCTTCTTATTTTGATTTATGGCTTGGGTCCTGTATTAGTTTAATATTTATTATATGAAATATCAGCTTATGTTTCC ATTTATAACTTGATTTTTTTGTATCATGTATCTTACGATACATAAAAAAAAATTGATTCATGATTTGAATCTCGATTCAA TAACTATAATCTGAGCCCTGACATACATATAAAACACAAATGAGCTGCACAATCTGTTAGTTTTAGTTTCAGAGGAAATC AAGCTGCAAAATATAGAAAAGATCAGTACAACTAATTGTTATATTTTTCTCTATGAAAATTGTGATTTTTTTAAGCTACT AATGTTGTGTTATTTACAGTTATCTATCTGTAAAAATTTATCTGAGAAATTGTTATCGTGTGTGAAACTAAGTATAGACA TGTGAAATGAGCAAATAGAGATCTGTTAGTGTTTTTCTGACAAGAATGTAATTGTGATTTTACACAAATTATGAATTGTT CAAGTGCCCACAGTACAAAATAGCATTGCATTGTCTGACAATTATGAATTTTGAAAAGAGATCTTGATGGACTGAGTCCT TTCCTTAAAGTTTCTATTGCTCTTTGTCAATGTCTATACTTTTGTGCTGGCTTTGATACTTTGAAAAATTAGTGTTTGAA AATGTTGTATTACTTCATTCCATGAAGATTGTGTCATTTTTTAACATAAATAAGTGAGTGCTATTTGGATAATTTTCTTT TGGGTTCTGTGCTTTTAAATTCTGGAAGCAAGTTCCTTGTTAACTTAGGGAAGATACTTATCCCTTTACACTTTTACCCT TAGGATTTTGACCTGCAGACTTATTTCTATTGAAGCTTCTCAATTTTATTTTCCGAACAGGTACTCAATCACGAAGGCAT TTTGCATTGCATTTGTGATGACTTTCTTTAGTGCCTTTGATGTTCCTGTCTTCTGGCCAATTCTCCTCTTCTACTGGGTG ACCCTCTTCACTCTTACTATGAGGAGACAAATAGCTCACATGATCAGATACAAATATGTACCATTTTCATTTGGAAAGAT GGTAAATTTTATATTTTCCATTCATGTGAAGTTGTTTTCATCAATTTTCTATGGCTGAGTTCATTCGATGGTGTTTTGAA TATAATTATACCTTTGTTGCTGATAAAGATTTGGTTTTGTTTATTTCACTTTTAGCGGTATGATGGAAAGCGGGCATCAG CAGAAAGCACAACCCTTTCAGATGACTGAAATACAGGTTAATTGAAACTTCATTTGCTTCATTTAAGACACAGACCCACA TGTGGCTAGATATCATTTGCAGTATATTTTGACAGATAGTGCAATCTGAGGATGTGATAGCAGCTGGAAAAGTTTGCTTT GAGGTCTACCATGGGCAACTGGATGTTTAATTCCCAGTTGTGTAGTTGTTTAGACTTTGGAATTCCTGAATGTTTTTTAC GCGTTAGCAAAGGATTCAGCTCAAGTGAGATATTGGGGTTTTAAGGACTCATTGCATCGATTCCTTTTCCTTTATTTTCT GTTTCTGTACAAATGCCTCTTATTTCTGAATTCTTAGTCAAATAACGGGAATTTTAGGTACATTATGTTGCATGAATCTC CCTTCATTATTTGCAATGCGGTTATACTGATCTATATTTCACATTTTATCATCTATTTTCTATCTTTCATTCTTCTCTTT TCTTAATCCATTTGCTTTTGAGGAACCCCCTTTTCTTTAAACTACACAGAATGCAATTTTTCTCCCCTTATTGAAGATAG TGTCCATGGTAATCTTTATACCTTTTTTTTTTTCCCTGGGCACATTATTTTGATGAAACGATTACTTGGTCCATTCATTT AGTCATGGGAACCTTTTAAAAGGGGGTCTATTGTATAGCATTTGCTTAGGAAATTTCCCTGCCAATCTTTACGTGCCGTC TATATGAAATAAGAATAATCAATGATTGAACCCAGTGTGAACTTTTTCACTTGCCTAGATTTGTTTATTTGGTCATATCG TTGATGGTTGGTGAAAGAGTAATGATATATACACACCTCATCTTTTAAACACTTCATTTCCACATATTTTTGTTTCTACC TCTCTCCTCTTATCATCTATCACATCTCATACTTTCTCTCTCTTACTTTTTCTTTTCTTCCTATCTCTCTCCTCTTCCAC CTCCTTCCACCTCAAAATGAGGTGTGAAGAAAACATTTTCCAACGGGTCAGTCATATCCGCAATGGATTGGTTATAAGTG GTTGTAAATTAAGAGGAATCTATCAAATCGTAGTTGCACGTATAGTTGAGCTCATGTTGCTCGTACAAAACAAAG
CDS sequence (LotjaGi4g1v0100900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATGCGGAGGCGGAGGCTACATCCCCGGCGGCCGCCGTATCGCGGTGGAAGTTCGAGGTGTCACGGCGGTACCAACA CCTCCTGGACAAAGCGACGCCGTACGTGGCGAAGCGGTGGTTGGGGTGCCTGGTGGTGGCGCTGGTGTACGCGCTCCGCG TCTACATGGTGGAAGGATTCTACATCGTTTCCTACGGTCTCGGCATTTACATCCTCAACCTTCTGATCGGCTTCCTTTCC CCTCAGGTCGATCCCGAGGTTCAAGATTCCGGTGGCCCCTCCCTCCCCACCTCCACTTCCGACGAGTTTCGCCCCTTCGT TCGCCGCCTCCCGGAGTTCAAGTTCTGGTACTCAATCACGAAGGCATTTTGCATTGCATTTGTGATGACTTTCTTTAGTG CCTTTGATGTTCCTGTCTTCTGGCCAATTCTCCTCTTCTACTGGGTGACCCTCTTCACTCTTACTATGAGGAGACAAATA GCTCACATGATCAGATACAAATATGTACCATTTTCATTTGGAAAGATGCGGTATGATGGAAAGCGGGCATCAGCAGAAAG CACAACCCTTTCAGATGACTGA
Protein sequence (LotjaGi4g1v0100900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDAEAEATSPAAAVSRWKFEVSRRYQHLLDKATPYVAKRWLGCLVVALVYALRVYMVEGFYIVSYGLGIYILNLLIGFLS PQVDPEVQDSGGPSLPTSTSDEFRPFVRRLPEFKFWYSITKAFCIAFVMTFFSAFDVPVFWPILLFYWVTLFTLTMRRQI AHMIRYKYVPFSFGKMRYDGKRASAESTTLSDD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 39 | 39 | - | – | |
| PIRSF | 1 | 189 | 189 | 3.6E-86 | ||
| PANTHER | 5 | 187 | 183 | 2.3E-138 | ||
| Pfam | 18 | 178 | 161 | 2.8E-74 | ||
| TMHMM | 40 | 57 | 18 | - | – | |
| Phobius | 40 | 56 | 17 | - | – | |
| Phobius | 57 | 61 | 5 | - | – | |
| TMHMM | 61 | 80 | 20 | - | – | |
| Phobius | 62 | 80 | 19 | - | – | |
| Phobius | 81 | 114 | 34 | - | – | |
| TMHMM | 113 | 135 | 23 | - | – | |
| Phobius | 115 | 133 | 19 | - | – | |
| Phobius | 134 | 138 | 5 | - | – | |
| TMHMM | 139 | 156 | 18 | - | – | |
| Phobius | 139 | 156 | 18 | - | – | |
| Phobius | 157 | 193 | 37 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi4g1v0100900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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