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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR004932
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 10 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.082s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0244099.1
n.a. PREDICTED: protein RER1B-like isoform X2 [Cicer arietinum] gi|502149264|ref|XP_004507459.1| chr0 126677302 126680724 -
4 domain predictions
1 GO term
Lj1g3v2125960.1
n.a. PREDICTED: protein RER1A-like [Cicer arietinum] gi|502152811|ref|XP_004509105.1| chr1 25457382 25460449 +
3 domain predictions
1 GO term
Lj1g3v3384590.1
n.a. PREDICTED: protein RER1B-like isoform X2 [Cicer arietinum] gi|502149264|ref|XP_004507459.1| chr1 38908948 38911069 +
4 domain predictions
1 GO term
Lj2g3v1904470.2
n.a. PREDICTED: protein RER1A-like [Glycine max] gi|356496931|ref|XP_003517318.1| chr2 28261404 28265422 -
4 domain predictions
1 GO term
Lj3g3v3360960.1
n.a. PREDICTED: protein RER1B-like isoform X2 [Cicer arietinum] gi|502149264|ref|XP_004507459.1| chr3 41282611 41285501 -
3 domain predictions
1 GO term
LotjaGi1g1v0566300.1
n.a. Rer1 family protein; TAIR: AT4G39220.1 Rer1 family protein; Swiss-Prot: sp|O48670|RER1A_ARATH Protein RER1A; TrEMBL-Plants: tr|A0A151TGB6|A0A151TGB6_CAJCA Protein RER1B; Found in the gene: LotjaGi1g1v0566300 LjG1.1_chr1 109964043 109968054 +
4 domain predictions
1 GO term
LotjaGi2g1v0404600.1
n.a. Rer1 protein, putative; TAIR: AT4G39220.1 Rer1 family protein; Swiss-Prot: sp|O48670|RER1A_ARATH Protein RER1A; TrEMBL-Plants: tr|I3SGQ8|I3SGQ8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0404600 LjG1.1_chr2 90160011 90165372 -
4 domain predictions
1 GO term
LotjaGi3g1v0509600.1
n.a. Rer1 family protein; TAIR: AT2G21600.1 endoplasmatic reticulum retrieval protein 1B; Swiss-Prot: sp|O48671|RER1B_ARATH Protein RER1B; TrEMBL-Plants: tr|I3SMX1|I3SMX1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0509600 LjG1.1_chr3 92669172 92673178 -
4 domain predictions
1 GO term
LotjaGi3g1v0509600.2
n.a. Rer1 family protein; TAIR: AT2G21600.1 endoplasmatic reticulum retrieval protein 1B; Swiss-Prot: sp|O48671|RER1B_ARATH Protein RER1B; TrEMBL-Plants: tr|I3SMX1|I3SMX1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0509600 LjG1.1_chr3 92670055 92672715 -
4 domain predictions
1 GO term
LotjaGi4g1v0100900.1
n.a. Rer1 protein, putative; TAIR: AT4G39220.1 Rer1 family protein; Swiss-Prot: sp|O48670|RER1A_ARATH Protein RER1A; TrEMBL-Plants: tr|I3SRP0|I3SRP0_MEDTR ATRER1A-like protein; Found in the gene: LotjaGi4g1v0100900 LjG1.1_chr4 13840893 13852327 +
4 domain predictions
1 GO term