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IPR004932

Source: InterPro

Description

IPR004932 is a Retrieval of early ER protein Rer1.

<p>RER1 family proteins are involved in the retrieval of some endoplasmic reticulum membrane proteins from the early golgi compartment. The C terminus of yeast Rer1p interacts with a coatomer complex [[cite:PUB00007222]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016021
Cellular component Integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
Subterm of

Associated Lotus transcripts 10

Transcript Name Description Predicted domains Domain count
Lj0g3v0244099.1
– PREDICTED: protein RER1B-like isoform X2 [Cicer arietinum] gi|502149264|ref|XP_004507459.1|
Domains
8
Lj1g3v2125960.1
– PREDICTED: protein RER1A-like [Cicer arietinum] gi|502152811|ref|XP_004509105.1|
Domains
8
Lj1g3v3384590.1
– PREDICTED: protein RER1B-like isoform X2 [Cicer arietinum] gi|502149264|ref|XP_004507459.1|
Domains
8
Lj2g3v1904470.2
– PREDICTED: protein RER1A-like [Glycine max] gi|356496931|ref|XP_003517318.1|
Domains
9
Lj3g3v3360960.1
– PREDICTED: protein RER1B-like isoform X2 [Cicer arietinum] gi|502149264|ref|XP_004507459.1|
Domains
7
LotjaGi1g1v0566300.1
– Rer1 family protein; TAIR: AT4G39220.1 Rer1 family protein; Swiss-Prot: sp|O48670|RER1A_ARATH Protein RER1A; TrEMBL-Plants: tr|A0A151TGB6|A0A151TGB6_CAJCA Protein RER1B; Found in the gene: LotjaGi1g1v0566300
Domains
8
LotjaGi2g1v0404600.1
– Rer1 protein, putative; TAIR: AT4G39220.1 Rer1 family protein; Swiss-Prot: sp|O48670|RER1A_ARATH Protein RER1A; TrEMBL-Plants: tr|I3SGQ8|I3SGQ8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0404600
Domains
8
LotjaGi3g1v0509600.1
– Rer1 family protein; TAIR: AT2G21600.1 endoplasmatic reticulum retrieval protein 1B; Swiss-Prot: sp|O48671|RER1B_ARATH Protein RER1B; TrEMBL-Plants: tr|I3SMX1|I3SMX1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0509600
Domains
8
LotjaGi3g1v0509600.2
– Rer1 family protein; TAIR: AT2G21600.1 endoplasmatic reticulum retrieval protein 1B; Swiss-Prot: sp|O48671|RER1B_ARATH Protein RER1B; TrEMBL-Plants: tr|I3SMX1|I3SMX1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0509600
Domains
8
LotjaGi4g1v0100900.1
– Rer1 protein, putative; TAIR: AT4G39220.1 Rer1 family protein; Swiss-Prot: sp|O48670|RER1A_ARATH Protein RER1A; TrEMBL-Plants: tr|I3SRP0|I3SRP0_MEDTR ATRER1A-like protein; Found in the gene: LotjaGi4g1v0100900
Domains
8

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
TRANSMEMBRANE Phobius 1 10.00