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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0106300 |
| Transcript ID | LotjaGi4g1v0106300.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sulfotransferase; TAIR: AT3G50620.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|P06236|NODH_RHIME Nodulation protein H; TrEMBL-Plants: tr|I1MVZ0|I1MVZ0_SOYBN Sulfotransferase; Found in the gene: LotjaGi4g1v0106300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:14783032..14786150) extracted from Lotus japonicus Gifu genome v1.2.
AAGACATGTGTTGCTTCAACAAGCTAGGTGCTCCTCTGTGGTCCTTACCACTAACTATCTCTCTTTTGTGCTATGAGGAA CAATGTGCTCCTTTTGAGCTTCTTGTAATGTGTTTTTTGTTCAAGTATTTCAGGACATTCTCGTTATAAAGCCTCAGAAG AAATCGCCACTCTTGTTAAAGATGTCAGTGTTGATATTTTCAATGGTGTATGGTGTTTTTATCTGTTCAGCTTGTCTAAA GCAGTCAAGCATTCATGCTAGGAGTGTTCTTCCGAAGCTGCAAGTTATTGAAAAGCCTTCTTCAAGTTACCTGCATTACC CCAAACCCGTTTCTTTTAACAGGTAATGGGAAATCTATGTGTAAAAGATCACCCAAATCATGGTAGACAGAAGCAACTCC CCTTAGGTGTTTTGTGACTGCCGTGATTTAGTGTGTATCCAAACATGCACTATGTAAATCTTGGTCTTTTTGCTCTGGTT AGAACCTTGTTAATTGCCTTCTTTTTCAGGAGTGAGTGTTCTCGTAATCCTGTGAAATTCTTTGCCATAGTGTCGAATCC AAGATCTGGCAGTGGGTGGTTTGAGACCCTTTTGAATAGCCATGTTAATGTGAGCTCAAATGGAGAGGTAATGGCTCCGA AAAGACGAGTAAATGTTTCTACAATCGTAAAGACTTTAGATAAAGTTTACAATTTGGACTGGCTCAGTAGTGCTTCCAAG AATGAGTGCTCTGCTGCAATTGGCTTAAAGTGGATGCTTAATCAGGTAAAAGTGTGATGAACTAAGCATATAATATATGA GTCATACTTGTATTTGTTTTAAGATGAAGGACAAATATAAGCATAGCTTTTATATGTTAGCGTCCCACATTGGCTAGAGA TATGGTCAATCAAGTGCTTATAAAGGTAGAGCAACCCTCAAATCTTGAGCTAGCTTTTGGGTTGAGTTAGGCCTCTCTAA TTCTAATAGTATTAGGCTTAGGTCGCTTTGTAATTTGACAACCCTCACCCTTTCCTTGTATTTCTGATGTGAAGAATCCA AGTGAAACTTGATCCATGTGCTTAACTTTGAGAACAAGTTATGATCTTGTTATCATCTTTTGGTTGCAAGAATGGCAGTT ATGATCATTGACTAGAGTAAGCAACTCTGTTGCATGTTGATATAATTTACTCTTCTGAGATTTACATAGCAAGTATTATG TTTATGTCTGATAGGAGTAGTGACATGTTTGAAAATCTTTCTAGAATTGATTTTAAAGCCAAAATCAAGTTGAAATCAAT TCTAGGGAGAAGCTTTTGGGTGCCATAATTGATTTTAAGGAAAAATAAGCTGGTCCAGAATGTTTAGAAATCCTTATACA ATTGATTTTAAAGTCAAAATCAATTATGGGAGAAGTTTTTCTGAGTCAGTTTAGCTGTCAGAATTGATTCTGAAAAAAAA GCTTATCCAAACATGCGACAAGTCTTGTACCTTAAATAGATGAGATGGAATGAAGCATAATCCTCAATCACAACATGATG GGGGCATAAGATTTGTTGTCCTTCTAGGAAACATCTTGGACACTATTAATCAATTATTTGACTTAGAGTTATGTTGTTAA TTATTTTTTGCTTTCTTCCTAGTATTACCAAAGTTTGATATTGGCCTTCTCATCTCAACTGTTACAATGTTATCCTGAGT CACAGTTTCCAAATTACATTTAGCAGATAAATACCGGTAGAACCAAAATCAAACTTATTGACACTCAAGGACCAAAGTTG TAGTTAAGCTGATTTCATCCATGTTACTATTTTGTTCTCCATCAGTGCATGAGATGCTTGGAATTCATTATTTGGCAATG CATTCATGCAACATGATTAGGCAGATGATAAATGAAGACTTGCCTTATTTGCAATTTATTTGTTGTTTGTTTTGCCCTTG CTTGTCAGGCTTGGTGATTCTGTTTTATTGGTTAGTATTTAGTAATGGAGAAATCAAAGCATCTTATGGTTTTCATGCAG GGATTATTGAAGCACCATGAAGAAATAGCATACTACTTCAACCGCAGAAGTGTCTCTATCATATTTCTTTTCCGGAGAAA CTTATTACGTAGAATGATATCAAAGCTTGCCAATTCCTATGATCGTCATGCGAAGTTGTCGAATGGAACTCATAATTCTC ACGTTCATTCTGCAGAAGAGGTCTCTCCTTCTTTCTCTATCCTTCTTCCCTTTCATTTTTCTTATGCATAAAATGAAACT CATCTTTGGCTTCGCTTAGGCTGATACGCTTTCAAAGTACAAGCCTACAATAAAATCGACATCATTGTTGACAACCTTGA AGGATATGGAGATGAGAGATGCTAAGGCTTTAGAATACTTCAACACCACTCGGCATATAATCTTGTATTATGAGGATCTT ATGAGGAATCCTAATGTAAGGGCCTCATCATGAATTTCTTCATCTTTTACTAAAAACATCTATATGTTAACTTATCAAAT CCATAATACAAGCACCATTTGTGGCCAGCTAACTTGAGATCTTTAGTTTCTTGCATTACCAATACATTTGAAGTTAACAA AAAGACGTGATTTCACTTTCTCTGTTTCTTTCAGAAGCTAAAAGACGTGCAGGATTTTCTAGGATTGCCACAGATGGAAT TAACAAGCAGTCAGGTTAAGATACATAGAGGACCATTGTCAGGCCTTGTGAGAAACTGGGATGACATTACCAAGACACTC AAAGGAACTGCTTATGAGAGTTTTCTCCAAGCTGACTATTCATCTTAACCGCTTCCAACTCTCTGCAAAGGTATAAATAC CAACAACACTGATTTTTGAGTAATGTTACTCACACACCTCTCTTTTGAGGTGTGTGAGGTGGAATGATGAGAGAGATAGG AAGAAAAGAAAAAGTAAGGGAGAGAAAGTATGAGATGTGATAGATGGTAAGAGGAGAGAGATAGAAATAAAAAGAGGTGG AAATGAAGTGTTTTAAAAATGAGGTGTGTATATATCATTACTCCTGATTTTTGAGTTTGAGGTTTGGTGCGGGCAAGAAT TCTTCCCCTGTCTTATAATGTTTCTTTTCACTGCCAATCAACATTCAACACTCTGTTGATAAGATGTGTCATTTGTAAG
CDS sequence (LotjaGi4g1v0106300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCAGTGTTGATATTTTCAATGGTGTATGGTGTTTTTATCTGTTCAGCTTGTCTAAAGCAGTCAAGCATTCATGCTAG GAGTGTTCTTCCGAAGCTGCAAGTTATTGAAAAGCCTTCTTCAAGTTACCTGCATTACCCCAAACCCGTTTCTTTTAACA GGAGTGAGTGTTCTCGTAATCCTGTGAAATTCTTTGCCATAGTGTCGAATCCAAGATCTGGCAGTGGGTGGTTTGAGACC CTTTTGAATAGCCATGTTAATGTGAGCTCAAATGGAGAGGTAATGGCTCCGAAAAGACGAGTAAATGTTTCTACAATCGT AAAGACTTTAGATAAAGTTTACAATTTGGACTGGCTCAGTAGTGCTTCCAAGAATGAGTGCTCTGCTGCAATTGGCTTAA AGTGGATGCTTAATCAGGGATTATTGAAGCACCATGAAGAAATAGCATACTACTTCAACCGCAGAAGTGTCTCTATCATA TTTCTTTTCCGGAGAAACTTATTACGTAGAATGATATCAAAGCTTGCCAATTCCTATGATCGTCATGCGAAGTTGTCGAA TGGAACTCATAATTCTCACGTTCATTCTGCAGAAGAGGCTGATACGCTTTCAAAGTACAAGCCTACAATAAAATCGACAT CATTGTTGACAACCTTGAAGGATATGGAGATGAGAGATGCTAAGGCTTTAGAATACTTCAACACCACTCGGCATATAATC TTGTATTATGAGGATCTTATGAGGAATCCTAATAAGCTAAAAGACGTGCAGGATTTTCTAGGATTGCCACAGATGGAATT AACAAGCAGTCAGGTTAAGATACATAGAGGACCATTGTCAGGCCTTGTGAGAAACTGGGATGACATTACCAAGACACTCA AAGGAACTGCTTATGAGAGTTTTCTCCAAGCTGACTATTCATCTTAA
Protein sequence (LotjaGi4g1v0106300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSVLIFSMVYGVFICSACLKQSSIHARSVLPKLQVIEKPSSSYLHYPKPVSFNRSECSRNPVKFFAIVSNPRSGSGWFET LLNSHVNVSSNGEVMAPKRRVNVSTIVKTLDKVYNLDWLSSASKNECSAAIGLKWMLNQGLLKHHEEIAYYFNRRSVSII FLFRRNLLRRMISKLANSYDRHAKLSNGTHNSHVHSAEEADTLSKYKPTIKSTSLLTTLKDMEMRDAKALEYFNTTRHII LYYEDLMRNPNKLKDVQDFLGLPQMELTSSQVKIHRGPLSGLVRNWDDITKTLKGTAYESFLQADYSS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 11 | 11 | - | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| PANTHER | 1 | 306 | 306 | 7.7E-151 | – | |
| SignalP_GRAM_POSITIVE | 1 | 26 | 26 | - | – | |
| Phobius | 1 | 20 | 20 | - | – | |
| PANTHER | 1 | 306 | 306 | 7.7E-151 | – | |
| Phobius | 4 | 15 | 12 | - | – | |
| Phobius | 16 | 20 | 5 | - | – | |
| Phobius | 21 | 308 | 288 | - | – | |
| Gene3D | 61 | 290 | 230 | 6.1E-25 | – | |
| SUPERFAMILY | 63 | 304 | 242 | 5.31E-15 | ||
| Pfam | 67 | 266 | 200 | 3.4E-7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Sulfotransferase activity | Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate. |
Expression pattern of LotjaGi4g1v0106300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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