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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0106400 |
| Transcript ID | LotjaGi4g1v0106400.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sulfotransferase; TAIR: AT3G50620.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|P06237|NOH4_RHIML Nodulation protein H; TrEMBL-Plants: tr|K7MM76|K7MM76_SOYBN Sulfotransferase; Found in the gene: LotjaGi4g1v0106400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:14838951..14841576) extracted from Lotus japonicus Gifu genome v1.2.
ATGTCAGTGTTGATGTTTTCAATGGTGTGTGGTGTTTTTATTTGTTCTGCTTGTCTAAAGCAGACCAGCATCCATGCTAG GACTGTTCTTCTGGAGCTGCAAGGGATTGAAAACCCTTCTTGGAGTAGATTCATCCGAGCGGATTTTCGTTACCTGCATT ACCCCAAACCTGTTTCTTTTAAGAGGTAATGGGAAATCTGCGTTGAAAATGAGCCAAAATCACGGTGAACAGAAGCAACT TTTCTTAGGTTTTGTGGCGGTTCATTGTGATTTTGCCTTCACTGTGATTTTCTACCGTGTATCGAAACATGTATTGTGTA AATCTTGGTCTTTTGGCTTTGATTAGAACCTTGTTAATTGCTTTGTTCTTTGCCAGGAGTGAGTGTGCTCATAATCCTGT GAGATTCTTTGCCATAGTGTCAAATCAGAGATCTGGTAGTGGGTGGTTTGAGACCCTTTTGAATAGCCATGTTAATGTGA GCTCAAATGGGGAGGTGTTTTCAGTTTTGGAAAGACGAGTAAATGTTTCTACAATTGTACAGACTTTGGATAAAGTTTAC AATTTGGACTGGCTCAGTAGTGCTTCCAAGAATGAGTGTTCTGCTGCAGTTGGTTTAAAGTGGATGCTTAATCAGGTAAA AGTTCTCAAGCCTTCTGCAAAAATGTGGTGAACAAAATTATGTATATCAGGTTCTCCTAAGCATATATATGAGTCATACT TGTATTTGTTTCAAGAAGAAGGAAAAATATCATTCTGCATTTGCTGGCATAGTTTTTATGGTATTTGGCTTGGCTTAGGT TGCTATGTAATTCGACACCTCTCACCCTTTCTTCATATTTCTGTTATGGAGGATCTAATTGCATGTTTGGTAGAAAACCA CAGTGAGCCAAAATCCTGGACAAAAGCAACTTTCCTTTTTTATGGCTGTGCACGATTTTGGATTCACCGTTATTTTCCAC CGTGTATCCAAACATGCACCAGTGAAACTTGAAGCATGTGCTTAACTTTGAGAACAAGTCACTCAGACTCTAACATTGTT ATCATCTTTTGGTTGCTAGAATGCCAGTTATGATTATTGACTAGAGTACTTTGTCCTTGATTAATTGCTTATAAAAAAAA AGTTTGTCCTTGATTAATATAATTTACTCTCCTGAGATTTACGTAGTAAGCATTATGTTTAGAAATCTTTAACAATTGAT TCTAAAGGAAAAATCAATTATTGGAGAAGTTTCTGGGTGCTAGAATTGGTTATGAGGAAAAATAAGCTGGTCCAAACATG TGAAGTCAAGTCTTTTTACCAGGAAATAGATATAGACGAGATGGAATCAAGCAAGGTCTTCAATGACAACATGGTCGGGG AACAAGACTGGTTGTCCTTCTAGGACCATTTTGAAACATCTTAGACCTTGATAACACAAACAGCTTGTGGCACTAGTCAG TCAATTATCTGACTTGGAGTTAGGTTGCTCATCTTTTTTGGCATTCTTCATAGTATTACCTAAGTTTGATTTTGACCTTC TCAAGTTCTCATTTCAACTATACAATGATATCCTCAGTCTCAGTTTCAAAACAACATTTAGCAAATAAGTACAGGTAGAA CTAAAATAAACTAAGTACACTAAAGGGACCAAAATATAGCTATCATTGACGTTGCTATTTGTTCTCCATCAGTGCATGAG AGGCTTGGAATTACATTATTTAGTGATGCATTCATTCAATATGATTATGCAGATGATAAATGAAGACTCGCTTTGCTTGT AATTATTTTGTTTGTTTTTTCCCTTGCTGTTCAGGCTTGGTGGTTCTGTTTTATTGGTTACTGTTAGTATTTAGTAATGG AGAAATCAAAACATCTTATGGTTTTCATGCAGGGATTAATGGAGCACCATAAAGAAATAGCAGACTACTTCAACCGCAGA AGTGTTTCTATCATATTTCTTTTTCGGAGAAACTTATTACGGAGAATGGTATCAAAGCTTGCCAATTCCTATGACCGTTA TGCGAAGTTATTGAATGGAACACATAAATCTCATGTTCATTCTGCACAAGAGGTCTCTTCTCTATCCTGCTTCTCTTTCA TTTTTCTTATACATAAAATGAAACTCATCTTTAACTTCTTTTAGGCTGATACTCTTTCAAAGTACAAGCCTACACTAAAT TCAACATCATTGTTGACTGACTTGAAGGATATGGAGATGAGTGATGCAAAGGCTCTGGAATACTTCAACACCACTCGACA TATGATCTTGTACTATGAGGATCTTATAAGAAATCAAATTGTAAGGGCCTCATCATAAATTCCTTTATCTTTTACTAAAA ACTGCTCTAATTTAACACAAGCACCATTTAGGAGTAGTAACTGGATTTGAAAATTTCTACACATTTGTTGCATTATCTAT ACATCTGAAGTTAGCTAAATGAATATGATTTCTCTTTTTCTGTTTCTTGCAGAAGCTAAAAGATGTGCAGGAGTTTCTAG GATTCCCACAAATGGAATTAACAAGCCGTCAGGTTAAAATACACAGAGGACCGTTGTCAGGCCACGTTAGAAACTGGGAT GATGTTACCAAGACACTCAAAGGAACTGCTTATGAGAGTTTTCTCCAAGCTGACTATTCATCTTAA
CDS sequence (LotjaGi4g1v0106400.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCAGTGTTGATGTTTTCAATGGTGTGTGGTGTTTTTATTTGTTCTGCTTGTCTAAAGCAGACCAGCATCCATGCTAG GACTGTTCTTCTGGAGCTGCAAGGGATTGAAAACCCTTCTTGGAGTAGATTCATCCGAGCGGATTTTCGTTACCTGCATT ACCCCAAACCTGTTTCTTTTAAGAGGAGTGAGTGTGCTCATAATCCTGTGAGATTCTTTGCCATAGTGTCAAATCAGAGA TCTGGTAGTGGGTGGTTTGAGACCCTTTTGAATAGCCATGTTAATGTGAGCTCAAATGGGGAGGTGTTTTCAGTTTTGGA AAGACGAGTAAATGTTTCTACAATTGTACAGACTTTGGATAAAGTTTACAATTTGGACTGGCTCAGTAGTGCTTCCAAGA ATGAGTGTTCTGCTGCAGTTGGTTTAAAGTGGATGCTTAATCAGGGATTAATGGAGCACCATAAAGAAATAGCAGACTAC TTCAACCGCAGAAGTGTTTCTATCATATTTCTTTTTCGGAGAAACTTATTACGGAGAATGGTATCAAAGCTTGCCAATTC CTATGACCGTTATGCGAAGTTATTGAATGGAACACATAAATCTCATGTTCATTCTGCACAAGAGGCTGATACTCTTTCAA AGTACAAGCCTACACTAAATTCAACATCATTGTTGACTGACTTGAAGGATATGGAGATGAGTGATGCAAAGGCTCTGGAA TACTTCAACACCACTCGACATATGATCTTGTACTATGAGGATCTTATAAGAAATCAAATTAAGCTAAAAGATGTGCAGGA GTTTCTAGGATTCCCACAAATGGAATTAACAAGCCGTCAGGTTAAAATACACAGAGGACCGTTGTCAGGCCACGTTAGAA ACTGGGATGATGTTACCAAGACACTCAAAGGAACTGCTTATGAGAGTTTTCTCCAAGCTGACTATTCATCTTAA
Protein sequence (LotjaGi4g1v0106400.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSVLMFSMVCGVFICSACLKQTSIHARTVLLELQGIENPSWSRFIRADFRYLHYPKPVSFKRSECAHNPVRFFAIVSNQR SGSGWFETLLNSHVNVSSNGEVFSVLERRVNVSTIVQTLDKVYNLDWLSSASKNECSAAVGLKWMLNQGLMEHHKEIADY FNRRSVSIIFLFRRNLLRRMVSKLANSYDRYAKLLNGTHKSHVHSAQEADTLSKYKPTLNSTSLLTDLKDMEMSDAKALE YFNTTRHMILYYEDLIRNQIKLKDVQEFLGFPQMELTSRQVKIHRGPLSGHVRNWDDVTKTLKGTAYESFLQADYSS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 8 | 8 | - | – | |
| PANTHER | 1 | 315 | 315 | 6.3E-167 | – | |
| Phobius | 1 | 26 | 26 | - | – | |
| PANTHER | 1 | 315 | 315 | 6.3E-167 | – | |
| SignalP_GRAM_POSITIVE | 1 | 26 | 26 | - | – | |
| SignalP_EUK | 1 | 17 | 17 | - | – | |
| Phobius | 9 | 19 | 11 | - | – | |
| Phobius | 20 | 26 | 7 | - | – | |
| Phobius | 27 | 317 | 291 | - | – | |
| Gene3D | 70 | 300 | 231 | 1.6E-24 | – | |
| SUPERFAMILY | 70 | 313 | 244 | 1.18E-14 | ||
| Pfam | 75 | 275 | 201 | 9.1E-7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Sulfotransferase activity | Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate. |
Expression pattern of LotjaGi4g1v0106400.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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