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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0107400 |
| Transcript ID | LotjaGi4g1v0107400.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | protein kinase family protein; TAIR: AT3G50530.1 CDPK-related kinase; Swiss-Prot: sp|P53681|CRK_DAUCA CDPK-related protein kinase; TrEMBL-Plants: tr|G7LGE1|G7LGE1_MEDTR Calmodulin-domain kinase CDPK protein; Found in the gene: LotjaGi4g1v0107400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:15090427..15093618) extracted from Lotus japonicus Gifu genome v1.2.
ATGACTACTGCCATCGCTATTGAGGATGTAAGAAGGGAAGTGAAAATATTGAGAGCTTTGACTGGACACAAGAATCTGAT ACAATTCTACGATGCATATGAAGACCATGATAATGTCTATATTGTAATGGAGTATGTTCTGATTGCTGTGCTTATTTAAC TTACATGCTAATTTTAATTTTTGTTACGATTTGGTTTGTAATTGTCAAGATTCTTGTTGTCATCTTCTTTCTTGTTGTTA AGTTCATTTGTAGTCAATGTTGTAACAAGTTTTCTCAAACCCTTATGCATCTTAGATTGTGCGAAGGAGGGGAGCTCTTG GACAGAATATTATCAAGGTATTTGTTTTGTAAACATTCATTCTTTTGAATGTGCAATATTTGGAAGCTGATTTGGGGGAT AAGGATAAAATATTATAAGGGAAACATAAAATGATTTGTGGCTGAAATATCTCTTTCCTCTTGCAGAGGTGGGAAATATA CTGAGGAAGATGCAAGAACTGTAATGACACAAATACTGAATGTTGTTGCATTTTGCCATCTACAGGGTGTTGTGCATCGT GATCTTAAACCTGAGGTGAAGTATATTGCAATTTGTTTTTCTTGAATCATAAGATTGAGACCCCCTGGGTATAAGACAGA GAGAGAAAGGAAAAGGCTGAAGTTGCAAAATAAATTCTCTTTTGAAAAAAAAAAAGGAAGGCAACTTGAAGACCCCCATA TTCTATCACGATGGTCTTTGATAACCTATGTAATAATTTGGTTGTGGTTATGTTTGATTTGCTTCATAGTTCTTGTCCTA TAATTTTTGTCTAGTATTAACTTCAAAGGATGGGTGATTTCTGGACCAGAACTTCCTGTTCACATCCAAAGATGAGAACT CAGAGCTGAAGGCCATAGATTTTGGGTTGTCAGATTTTGTTAAACCAGGTCTGTTTTGAGTCCTCTTTTGTACCTTGCAC GTCATGCAGTACATGGGTTTGGGTTAAATTTTGACTTTTCATTATGCTTTATAGATGAAAGGCTAAATGATATTGTTGGT AGCGCATACTATGTGGCTCCTGAAGTTCTGCATAGAGCTTACAGTTCAGAGGCTGATGTCTGGAGCATTGGTGTGATTGC ATACATTTTATTATGTGGCAGCCGTCCATTTTGGGCACGGACTGAATCTGGGATCTTTCGTGCTGTATTGAAAGCTGACC CAAGTTTTGATGAACCTCCTTGGCCCTCTCTGTCTGATGAGGCAAAGGATTTTGTTAAGCGACTACTAAATAAAGATCCA AGGAAAAGAATGACTGCCGCACAGGCCTTAGGTGAAATTCTCATCTATCACTGGAGGGTCTTGGTTTATCTTTGACTCTA TGTGTTCCTTACAAGTGTATACTGCAGGTCATCCGTGGATTAAAAATTATAAGGATGTAAAAGTACCGTTGGATATTATA GTGCTCAAGCTCATGAGGGTGTACATGCGTTCCTCCTCTCTACGAAAAGCAGCTTTACGGGTGTGTATATTTATCCAGAG CTTGCTTTAATAATCTTGATATTGAATGGAAAACAGCCTTTGGTGAACTGTATATCTGCCGGCAGTTGGTATCTTCTCTT CTGATTTTTACTAATGGATCTATGCTTTCAATTGCTTTTATATTCTCCACCTTACTAATAAGTGTTTTGCTTATGCAAAA GTTTACTTCATAGAATGCTTGAAATCAGTTTGAGTTCATTGTTGTATGAATGATCTGGGTGACAGTCAGTCAATTTTCGT TTATGTTTCCAACTAGTGGGGCTTAAAATCTATGTACTTATGAAGTTCTATTTGGAAGTTCAAAGTTAAAGATGGTAGGA AATTGTACATGTACAATATCATAGTTTTCAAGATTGCTTTTTTATCTAATTTTGTTTGCTACTCACAATAATGTACTAGC ATTTTATTTTCATGGTGACCGGGACAGGCTCTGTCTAAAACGTTAGCTATTGATGAGCTGAATTATTTGAGGGAGCAATT TGCAGTTTTAGAGCCTAATAAAAATGGCACCATTAGCTTGGACAATATCAAAGCGGTTGGTTTTTTTTTGAACTTTTTTT ATTTACCATGTAATCTCATAAAAAGATGATGCTTGAAATCTCATAATTTGAATTGGCCAGGCCTTGATGAAGAATGCAAC AGATGCTATGAAGGAGTCACGCATTACAGATTTTCTGGCATCAGTAAGTTCTTTGATTTTACTGTGGAATACCTCTAAGT ATGGCATAACCGATATTTGCTTCATGTTTTGGTGATTGATGCAAATGCTTTTGGGTGGCAGCTTAATGCATTACAATATA GAAGGATGGATTTTGATGAGTTCTGTGCAGCTGCACTTAGTGTTCATCAACTTGAAGCCCTTGACCGGTGGGAGCAACAT GCACGCTGTGCCTATGAACTTTTTGAAAAAGATGGAAATAGGGCTATTATGATTGAGGAACTAGCTTCGGTATGCTTGAT TGCTTGCGATATACTTTATACATGCATGTCTCTGGTGTTCTTTATACTGATAATCTTACCCTGTCAGCTGTTTCTTTAAT GGAGATATCTAAATTTTCAACTTTGGTGGGTTGCAACTTACAATTTCTGGCAGCCTAGTAATCTCTAAATTGATAAAGCA GAAATTTCAACATTGGAGTATAAATATTGCAAGAAACTAGTTTCAGTTGTTGTAAAGTTTATGGGCTAATTTGTTGTTGG TTTCTTATCAGCAGTCATATAGGACTTCTTTGATTTCCTTTTTAGTTTTTTGAATTTATAAACTATTTTTATAAATAATG TTTAAAACCTGTTTTTCACAACAAGAAAAGAAAAAAAAAACTGTTTGAACGAGATGTTTTATAAGGTTGAAAGACCGGTG ACTTAAAGATTAAAAAACGATTCAAAAAACATCTGTGATGTTTTGAGAAAAAATTGTTCTACAAAACAGTAATCAAATAG ACCCTGTGATATTCCTGTTAGGGTTTCAGTTTAACACCAATTTCTCTGATTATGCAAATACATTTCTCATGTATGGTTTT AAATAAATAAACAGGAGCTTGGCCTTGGTCCATCTGTCCCTGTTCACGCTGTTCTTCATGACTGGATCAGGCACACAGAT GGAAAGTTGAGCTTCCTTGGGTTTGTTAAATTGTTGCATGGTCCATCTCGAAGTCTTGCAAGACCTCAGTAG
CDS sequence (LotjaGi4g1v0107400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACTACTGCCATCGCTATTGAGGATGTAAGAAGGGAAGTGAAAATATTGAGAGCTTTGACTGGACACAAGAATCTGAT ACAATTCTACGATGCATATGAAGACCATGATAATGTCTATATTGTAATGGAATTGTGCGAAGGAGGGGAGCTCTTGGACA GAATATTATCAAGAGGTGGGAAATATACTGAGGAAGATGCAAGAACTGTAATGACACAAATACTGAATGTTGTTGCATTT TGCCATCTACAGGGTGTTGTGCATCGTGATCTTAAACCTGAGAACTTCCTGTTCACATCCAAAGATGAGAACTCAGAGCT GAAGGCCATAGATTTTGGGTTGTCAGATTTTGTTAAACCAGATGAAAGGCTAAATGATATTGTTGGTAGCGCATACTATG TGGCTCCTGAAGTTCTGCATAGAGCTTACAGTTCAGAGGCTGATGTCTGGAGCATTGGTGTGATTGCATACATTTTATTA TGTGGCAGCCGTCCATTTTGGGCACGGACTGAATCTGGGATCTTTCGTGCTGTATTGAAAGCTGACCCAAGTTTTGATGA ACCTCCTTGGCCCTCTCTGTCTGATGAGGCAAAGGATTTTGTTAAGCGACTACTAAATAAAGATCCAAGGAAAAGAATGA CTGCCGCACAGGCCTTAGGTCATCCGTGGATTAAAAATTATAAGGATGTAAAAGTACCGTTGGATATTATAGTGCTCAAG CTCATGAGGGTGTACATGCGTTCCTCCTCTCTACGAAAAGCAGCTTTACGGGCTCTGTCTAAAACGTTAGCTATTGATGA GCTGAATTATTTGAGGGAGCAATTTGCAGTTTTAGAGCCTAATAAAAATGGCACCATTAGCTTGGACAATATCAAAGCGG CCTTGATGAAGAATGCAACAGATGCTATGAAGGAGTCACGCATTACAGATTTTCTGGCATCACTTAATGCATTACAATAT AGAAGGATGGATTTTGATGAGTTCTGTGCAGCTGCACTTAGTGTTCATCAACTTGAAGCCCTTGACCGGTGGGAGCAACA TGCACGCTGTGCCTATGAACTTTTTGAAAAAGATGGAAATAGGGCTATTATGATTGAGGAACTAGCTTCGGAGCTTGGCC TTGGTCCATCTGTCCCTGTTCACGCTGTTCTTCATGACTGGATCAGGCACACAGATGGAAAGTTGAGCTTCCTTGGGTTT GTTAAATTGTTGCATGGTCCATCTCGAAGTCTTGCAAGACCTCAGTAG
Protein sequence (LotjaGi4g1v0107400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTTAIAIEDVRREVKILRALTGHKNLIQFYDAYEDHDNVYIVMELCEGGELLDRILSRGGKYTEEDARTVMTQILNVVAF CHLQGVVHRDLKPENFLFTSKDENSELKAIDFGLSDFVKPDERLNDIVGSAYYVAPEVLHRAYSSEADVWSIGVIAYILL CGSRPFWARTESGIFRAVLKADPSFDEPPWPSLSDEAKDFVKRLLNKDPRKRMTAAQALGHPWIKNYKDVKVPLDIIVLK LMRVYMRSSSLRKAALRALSKTLAIDELNYLREQFAVLEPNKNGTISLDNIKAALMKNATDAMKESRITDFLASLNALQY RRMDFDEFCAAALSVHQLEALDRWEQHARCAYELFEKDGNRAIMIEELASELGLGPSVPVHAVLHDWIRHTDGKLSFLGF VKLLHGPSRSLARPQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 224 | 224 | 45.884 | ||
| PANTHER | 1 | 408 | 408 | 8.0E-265 | – | |
| PANTHER | 1 | 408 | 408 | 8.0E-265 | – | |
| SMART | 3 | 224 | 222 | 1.0E-75 | ||
| CDD | 6 | 223 | 218 | 5.25095E-122 | – | |
| SUPERFAMILY | 8 | 249 | 242 | 7.69E-74 | ||
| Gene3D | 8 | 48 | 41 | 2.4E-121 | – | |
| Pfam | 8 | 224 | 217 | 1.1E-65 | ||
| Gene3D | 49 | 230 | 182 | 2.4E-121 | – | |
| ProSitePatterns | 86 | 98 | 13 | - | ||
| Gene3D | 231 | 402 | 172 | 2.4E-121 | – | |
| SUPERFAMILY | 252 | 406 | 155 | 4.82E-17 | ||
| ProSiteProfiles | 266 | 301 | 36 | 8.934 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi4g1v0107400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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