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LotjaGi4g1v0107500.1

Overview

Field Value
Gene ID LotjaGi4g1v0107500
Transcript ID LotjaGi4g1v0107500.1
Lotus japonicus genome version Gifu v1.2
Description 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; TAIR: AT3G50520.1 Phosphoglycerate mutase family protein; Swiss-Prot: sp|Q9SCS3|PGML4_ARATH Phosphoglycerate mutase-like protein 4; TrEMBL-Plants: tr|I3SA43|I3SA43_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0107500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:15113950..15119765) extracted from Lotus japonicus Gifu genome v1.2.

GACTAAAATTAAATTTATTTGCAAGCTCAGGGAGTAATTTTAACATTAACTTTCAAACATCCACATAGACTTAAGTTATT TATGGTGTGTAAACTCATTCTTGGTGGCGCTTTAAAAATTGAGAAAAGCTACGCACGCAGCATTCTCACTCGCTCTCTCG TTCAGACTCACACAATGTCAGAGTCTTCCATCGACGATTCCAATTCCAGGTTCCTCAACTCATTCTTCATACTATTTTCG CATCACCATGTCCCCAATTCAATGAAAATCCCAAATTTTCATTGCTCTTCCTATTTCAATTTCAATTTTTCTCGAACTGA TTAGTAAGATTATGCTCGTTTCAGCTCTCCCCATCCAGATTATGCTGAGATTGTAGTGGTGCGCCATGGTGAAACAGCTT GGAATGCTGCAAACAGAATCCAGGTGCATTTCATTGAATACGTTGTTTATGATAATCTACCTCATTTTTTTGTTGCATTA AACAAATTTGTTCATGACCATCAAGTTTTTTTTCATGAAATTCAAATAAAGATTGTTGTTATTCTGAAATAATTTCAATC ACTTGGTTAGTTTCCAGCAATATCCTGAAATAACTGCTTAAGAACTCTGTACCTTTTCTTTTAGTCTTAGTTTTATATGA TTAGGATTCCAATGTAGGCATACTAGGCTACATTTTTAGGAAAATTGTATATCGGTAGCTGTAGGTTATTTACAACATGA AATTTTATAAACTTCTGGTGTTTCACCAAAAGGGTCTTGTGTTTTTTCTTTTTTATAGGCAAAATGTTAGTTCTTATTTG TTACTCCCTCCGTCCCTTATTATAAGACCTTTTATTGTCTCACAATAAGGTCTTATAATAGGGGACAAAAGGAGTAGTAA ATTAGTTCTTTGCCAGGGTTCACCCTGGTCCTTCACCCTGCAAATCCTTTCATTTCCCTTAACCCATCAAGTGAGGTACC CTTCCGCCCGTGAAAATATGTAACTATTGTCTCTGTCTTGTAAAAACAACTATACCGTATATCCAAAAGTTACAAACTTT GGCATTTGCGGAGGCAATGATAAAAAGTTATGGACTTCTAAAACATGAAACTAATGTTTAAAGTGAGTCTAGGATGTCCC TATTTTCTGATAGTGAATCTTAGAAAGGACCATTAATATAGTTTGCTTATTCTTTTCATACATACCCTTATGAGGCCATG ACAGAGTGCTTTCTAGGTCTAACTGTTTTTCCTTGTCCTTCTACAGCAATATAAATATCTACCAACTATGTGTCTGCTAT TACTAAGATTTTTTTTCTTGTGCATTATTCTTATATCAGTTTTCTTTAGAGTTTTCTGGCCTTGATTATGTTCATATTTC TTTAATATATGTAAACAGGGACAGCTGGATGTTGAATTAAATGAAACTGGTAGACAGCAAGCAGTTGCAGTAAGTTGAAA CTGGCCATGACTTGATCCTTACATTACATTTTTGTTTATTTATACCTTCATTGCCCTAATTCCTGTAAACTTTTCAATTG AGGTGGCTGATAGACTATCCAGAGAATCAAAGGTCTCCATTATATATTCTTCTGACTTGCAACGGGCCTTTGAAACAGCA CAGGTTATTGCATCCAAATGTGGAGGGGTAGAGGTTAGAACTCAATGTTTGCTTAATGTTGCATTTTTTATAATTTAATT GTAATAAGATAATAACCTAGTAAGGATTTCTATTTTCTAGTTTAATATGTTCAATACTTGAAGTCATTACTCCTTTGGTT TATAGGTATTCAAATGTTCTTTCTTATCATTATCAGGACCTATGGTTGACTATGCTTGACATAATCTTGCTGTTTTTGGT AATTATGAAATGCACAGTTATGAATGGTTTTTTTGCTTAGATAGTCTTAGGGTTGAAGCTATACGCGGGGAATGAGATAA AAATTGATCTGTGATGATTTGATATAAAACTTTTCCAATGGTCCTACTTTTATAAATTATTTGATCAAGACCTAGTTTAG TATTATTAGTTGCCTTAATCCAGATATACTAACTGCTAATATTAATTTTATAAGGAAATAAGGGAGGAAACACAGTGAAT AGGCAACAACTCCTAAAGTTGGTTCCTCAATTAGATTACTAATTCATTTCACTATATGTTCTAAAGATATACTTAGATAA CGTAAAGATATTTTAAAATCTTGACATATATACTAAAGATATTCTGAGATATTTTGTAGACTTTCTAATGTTGACATATA TACTAAAGATATTCTGAGATATTTTGTAGACTTTCTAACAGATAGAAATAGAAAAATATCTCAAGTCTTACTTTAGTTGA ATATTTCGTATATGCAATCTCTTCTATAACGTCACTCTTAAAATTTAAGTTTACTATTTTTTGTTTTTAATTCTTGACCA ATTAAGTACAAGTGTTCTGTCAAATACTCTTCATTTTCCCCGCAATACTTACTTTTTTATTGAAACTTTAGGTTGTCAAG GATTCTGGCCTGCGGGAAAGACACCTCGGGGATCTGCAAGGCGTTGTGTATCATGAAATGACAAAATATCCCGCAGCTTA TAAGGCTTTTATGTCTAAGAATGAAGATCAGGAAATACCAGTAAGTACCATAGAAGCCTACTTATAAGCATAAAATTCCT TGTCAATGAAATTACAAGGCGGTAAATTTGGACCATGCTACCTATAAACAGAAAAATAATTCAGTGGAGCATGTCCAAAG AATTTAGAAGATGATTGTTAATGATGACTTGCTGGAGGTGCATATATGCGGTTGCATATGGAAAACTGAAGAATCAGCCA AACTATGTCATATCATATGGCATAATTAAACATGAAAGATCAGTCAGATGAGTTTCGCTCATCTTCTAAATTTTCGGTTA GAGATATTTTTTTTAAAAAAGAAAATCATTTTATGCTCTGTTAGATTATCCATTTTCAAAAATCTAGAAATGCTAAGAAC AACCTGTCTGACAATTCTAACAAATCATTTGGAGTCTGCTTTAAATTCCGATGTAGAACTAGCTTATTTATTCATGATCT AATTGTCCTATTTGTTTTATATAGTAACTAAATCATTGTCAGGTAGTCTTTCTTGTACCTCAGATATTTTTTTCTGGTGT TTCCGATTATAAGCTATGGCTGAAAGAAATGAGATTGTAAAAGTAAAGGTTCAACACCTGTGGCAGTGTGGCATAATGTG GAAACAAGGGTATATTCATGTATATTAAAACTTCCTATGGCATGATGTTTGTCATCCAGTTTATGTTTATGGATGCTTAA TGAATATGTAAATGATAAATGCTTTAAATTTTGCATAAACATTACATTTATCCATGTACCATTATGTGCAGGGTGGTGGA GAAAGTTTTGTTCAACTTTTTGATCGCTCCACATCTGCATTGCAGAGAATCGCCTTAAAGCATCAAGGTAGGCTACCGGT AAAAGTTTTTCTGTCATGACATCTCATGGAAATTATGTTTATCCTATTAGTTATTGGTTTGATTATGAACCTTGTAGTTC ATCCAATAATCTCAGTACTCTGCATGACACCCTGACTTGCCTGGTTAGATTGGCTTGAGATGCGAGTTACTTTGCCCCTA TGGCACTTGATGTCTTGCTTAAACATCCTTGTCGTAAATTTATCTGAAAATCCTAATACATATATCTCATTTCAAAGTCC ATTAACAGCTACATTAGGCTTATGTTATCTGTATTAATTAACTGCAGGGGAGCGTGTAGTCGTTGTCACTCATGGTGCAT TCATTCGATCACTTTACAGGCGGGCCTGCCCAACCGGAAAGCCCGCTGGGAAGGTACTGAACACAAGCATCAGTGTTTTC CACTTGTATGGTGAGGACAAATGGATCTTAAAAGTGTGGGGCGATGTTAGCCATCTGAGCCAAACTGGGTTTCTGGAGTC TGGTTTTGGTGGTGATAAAACTTCTGGTTAGGCCATTGTTTCCCATCCAAAGGTAATAAAGTTTTGATTGTTTCCCATCC CAAGTTAAGGTTTAGAGGAAGAAGAGCGGAAAAGGATATTAAGTGGTGCTTTCAAATCTGATTTTGGCCTCCTATCATGG GAAGTACATATATTTTGTATGTTACCATGCAAATATATGCTCACCATGTAAGGATGTGCCTAAAGGCCTAAACAATGTTT TTTTTTGGCGGTGATGCATCAATCTGGCATTAAGAACTTTTTCTTTTTAAATCTATTCAAACTGTTAAATGTAGTGGAGA ATGCAATGGTGTGCATTTCCCATTTTAGTATTATTACTTAAAAAAGGGTGAGCCTTTTGTAAGGCTACTTCAGTAGCAAG ATTAATTTAAACGATGGAAATCTAAGGACTCGTTTGGCACGCCGTATTAGACATGATAGTATAAGCTTATACAATACATT ATGAGTTTATTCATTGTTTGGTGATGACATTGTATTGTATAAGTTTATCCATCAAAGTCTCCTTATACGTTAAAATGACG TATAATTTAATCCATCATGTGAGTGAAGGATAAGGCATGATAAGGTTGTGACGTATAAGTCACCATCACCACCACCCTCC ATTGCTGCCAACTTACACCACCATTGGCACCACCACCGCCACCGGTGTTGCCGCCACCATCCGATCACCACCGCCGTCGC CACCACCGCCCTACCGTCACCACTAGTGTTGCCGCCACCACCACCAGCGACACCACAACCACCACCCTATCGCCACCGCC ACCATAATTGCCGCCACCACTCTATTGCCACCACCACCACCACTGACACCACAACCACCACCCTATCGCCACCACCACCA CCATTGCCTCCACCCTCCACCGTCGCCACCATAATCGCCGCCACCACTCTATTGCCACCACCACCACCACCACTGACACC ACAACCACCACCATTGCCTCCACCCTCCACCGTCGCCACCATAATCGCCGCCACCACCCTATCGCTACCACCACCACCAT TGCCTTCACCTTCCACCGTCGCCGCCACCATACTGCAGCCGCCACCGCCACCGCCTTACCACCACCCTATCTTCGCCAAC ACCACAACCACCATCGCTGCCACCACCCGATCACCACCACTGTCGCTGCCACCATCGCCCTACCACCACCGACACCACAA CCACCACCCTATCGCCACCACAACCACCATTGCCTCCACCATCCACCGTAGCCGCCACCCTACCGCAGACGCCACCCCCA CCGCCTTACCACCACCACCACCACCACCACCCTATCATCGCCACCACCACAACCACCATTGTTGCCACCACCACCACCAA CCTATCTCCACTGTCACCACCACCGCCACCAACACCAACCTACCACCATTGCCACCACCACCACCAACCGACCACTACTT CCATCACCACCGCCACCACCGTTATATTCACCTCCATATTTGATTTTTATTATATAACATTATTCAATACTTCACTAAAC ATAAAATTGCATTAATTTAAACGATATGGTAAATTATACAGAGCATGGCCAAACGCTGGATAGTATAAGAAAGTTATCAG GGCTTATACTATCAGGCCTAATACTATCAGGTCTTATACTATCAGGTCTTATACTATACGTCGCACTAAACGGGCCCTAA AGGTTTTTTACATTTCAAAGCCGAACACCAAACTAATCCTTCGGTCTAATCATTAATGAGTTAATAACACTGAGCACTTG AGTATATTATACGAAACTTTGGATGAACATATCACAACAGCTAGTTTGAGAATTGAGAGCTCAAAGCCTTTTTAAATATC GCACTGGAATCTCATATTTCTAATGTGGTAGCAAAGTCACATAGCATACTACATCC
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0107500.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGTGTGTAAACTCATTCTTGGTGGCGCTTTAAAAATTGAGAAAAGCTACGCACGCAGCATTCTCACTCGCTCTCTCGT TCAGACTCACACAATGTCAGAGTCTTCCATCGACGATTCCAATTCCAGCTCTCCCCATCCAGATTATGCTGAGATTGTAG TGGTGCGCCATGGTGAAACAGCTTGGAATGCTGCAAACAGAATCCAGGGACAGCTGGATGTTGAATTAAATGAAACTGGT AGACAGCAAGCAGTTGCAGTGGCTGATAGACTATCCAGAGAATCAAAGGTCTCCATTATATATTCTTCTGACTTGCAACG GGCCTTTGAAACAGCACAGGTTATTGCATCCAAATGTGGAGGGGTAGAGGTTGTCAAGGATTCTGGCCTGCGGGAAAGAC ACCTCGGGGATCTGCAAGGCGTTGTGTATCATGAAATGACAAAATATCCCGCAGCTTATAAGGCTTTTATGTCTAAGAAT GAAGATCAGGAAATACCAGGTGGTGGAGAAAGTTTTGTTCAACTTTTTGATCGCTCCACATCTGCATTGCAGAGAATCGC CTTAAAGCATCAAGGGGAGCGTGTAGTCGTTGTCACTCATGGTGCATTCATTCGATCACTTTACAGGCGGGCCTGCCCAA CCGGAAAGCCCGCTGGGAAGGTACTGAACACAAGCATCAGTGTTTTCCACTTGTATGGTGAGGACAAATGGATCTTAAAA GTGTGGGGCGATGTTAGCCATCTGAGCCAAACTGGGTTTCTGGAGTCTGGTTTTGGTGGTGATAAAACTTCTGGTTAG
Download CDS Sequence

Protein sequence (LotjaGi4g1v0107500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MVCKLILGGALKIEKSYARSILTRSLVQTHTMSESSIDDSNSSSPHPDYAEIVVVRHGETAWNAANRIQGQLDVELNETG RQQAVAVADRLSRESKVSIIYSSDLQRAFETAQVIASKCGGVEVVKDSGLRERHLGDLQGVVYHEMTKYPAAYKAFMSKN EDQEIPGGGESFVQLFDRSTSALQRIALKHQGERVVVVTHGAFIRSLYRRACPTGKPAGKVLNTSISVFHLYGEDKWILK VWGDVSHLSQTGFLESGFGGDKTSG
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR23029
38 264 227 9.4E-113 –
PANTHER
PTHR23029:SF86
38 264 227 9.4E-113 –
Gene3D
G3DSA:3.40.50.1240
50 252 203 8.5E-59
IPR029033
CDD
cd07067
51 242 192 8.15869E-41
IPR013078
SMART
SM00855
51 207 157 5.0E-24
IPR013078
SUPERFAMILY
SSF53254
51 249 199 7.2E-53
IPR029033
Pfam
PF00300
52 244 193 1.9E-56
IPR013078
ProSitePatterns
PS00175
54 63 10 -
IPR001345

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0107500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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