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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0109200 |
| Transcript ID | LotjaGi4g1v0109200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | NBS-LRR disease resistance protein; TAIR: AT5G66900.1 Disease resistance protein (CC-NBS-LRR class) family; Swiss-Prot: sp|Q9FKZ1|DRL42_ARATH Probable disease resistance protein At5g66900; TrEMBL-Plants: tr|W0M058|W0M058_CICAR NBS-LRR protein; Found in the gene: LotjaGi4g1v0109200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:15468659..15473399) extracted from Lotus japonicus Gifu genome v1.2.
GGAGATGCTCTAAAGGAACAGTTAGCTAATTTCACCTACAATAATTACTCCATTAAAGTTCACATGAGTGCGCGTGGAAG AAGAAGCCAGGAAAGTTACAACGGAAACAAAAGAAAAGAAATGGAAAGTCACAAGAAATTGAGAGGGCAGTCTTCATCCC TGTAGCCTATTAATATATACCACCAAGTTCTATTCTTTCAATTGTATAGCCGTTCAGAGTTCTATTCTTTCAATTGGAGA TCCTGATACAACAACGTTACATCAACTTTGAAATTCCCTTCTTTGTCATAACCTAATAAGTAAGAACCCAACTTTGCACA TTCAAAAGGTATGTAATTGTTACTGTCTCTTTTCACATTCTGAAATTTCAATTTTAGCAACAAAAAACAACAACGTTAAG CTTAACTTCTCAGTTCTCTGTCTTGTTTGTTTGAACAGAGGAAGAACAACACACAAGGAGAAAAAACATAAGAGGTTGCT GGTTAAACATGGCTGACGTAGCTCAACTCGCTTTTCTTACATTACACTTGGATCCACCCAGAGAAGAAATCAAGACCCTT ATCAGAGAAAAAGATGCAGGGGAAGGGGACAAGTGTCTCTGTTGGGGAAACTTTATCTCTTTGCTTCAACTCTGTGTGAA CAAGCTTTGTCATAATAATAAAGATGATTTCTTAAATGTTGATGGTGAAAAGCAAGCTCAAATGGCTAATGATGTGAAGG ACACACTTTACAAGGTTAGAGGATTTCTTGAGCTTATTAGCAAAGAGGATTTTGAGCAGAAATTTAGTGGAGCACCCATT AAGCGTCCTTATGGTGTTCCAGCAAACCCTGAATTCACTGTTGGGGTGGATGTGCCGTTGAATAAGTTGAAGGTGGAGCT TCTCAAAGATGGTACCAAAGTCCTTGTGTTGAGTGGTTTGGGTGGATCAGGGAAAACCACTTTGGCTACAAAGCTTTGTT TGGATGAACAAATCAAGGGTAAGTGTTAACTCCTCTTTGGGTCTCTTATATGCCTTATTGCCTGATAAAAAATGTTCATT ACAAATTTTGCAATCATCCCATGGTTCGGAAAACTGTAGTTGTCCCTCGGAACAAATTACTTTCCTGGGGTCGAACTCGT GTTCTCACCCTTATGAGGGTTTAGCTTAATTACCACTAGACCAACACCTTATTGTTATTCTGCAGCAAGATATACACTTA GTAAAATAAATACTTTTTACACACAATGATAAAGATTATGAAATGGTAGATGACATGAACTTCTCTTGGCTTATGGATCT TTTTGGTTTATCTAGGTAAATTCAGGGGAAATATTTTGTTTGTTACCTTCTCAAAAACGCCCAACTTGAAGAATATTGTG GAGAGATTATTTGAACACTGTGGATATCCGGTGCCTGAGTTTCAAAGCGACGAGGATGCAGTTAATCAATTGGGACTTCT GTTGAGGAAAATTGAGGGAAGTTCAATTTTGCTGGTTCTGGATGATGTTTGGCCTGGTTCTGAAGCCCTTGTTGAGAAAT TTCGATTCCGGATATCCGATTATAAAATTTTGGTGACTTCAAGGGTCACATTTCCTAGATTTGGCACCCCATGTATCCTA AAACCTCTTGGTCATGAAGATGCAATGACCCTTTTCCGCCACTATGCTCTCTTGAAAAAAAGCAATTCAAATACTCCTGA CGAAGATCTTGTACAGAAGGTAATGTTCTCACCGATACATGGAGTTGTCTTTACTTGTTAGTTTTTGTCTAAGTCATTCG TTTGAACTCGACATCACTAGATTTTACATGACCATTTGGAAACTTCTATATTTTTGAACATGTCATTGCATTAACAGAAA AGAAAAAGGAATAAATCAAGTAAAAAAACTATGTTTTACAATGTAATAATATGGTAGGTTACAAGACATTTGAGCTCCTG AGCCATAAATCTTTGATTGCTGACTGTATATGCTTCCACTGAAATTCAGGTTGTGAGAAATTGCAAGGGCTTGCCGCTTG CCATTAAAGTGATTGGCACGTCACTCAGTCATCAGCCTAATGGGTTGTGGCAGAAGACATTGAAGGAACTGTCACTGGAT CATTCTATACTTGATTCTAATACTGAATTACTTACCCAATTCCAAAAGATCTTAGATGTTTTACAAGATAATCCCATCAT CAAGGAGTGCTTCATGGACCTAGCATTATTCCCTGAAGACCAAAGAATTCCTGTTGCTTCTCTCATTGATATGTGGGCCG AGTTGTATGGACTAGATGATGACGGCATAGAAGCAATGGCCATCATCAACAAATTAGTCTCCATGAATCTGGCAAACCAC TTAATAACAAGGTACAATGACTGCGAATATGTTCTTCTTGGCAACTTAATTCTAATATATCTTACATGAGTTATGTTCTG CAGAACACAAAATTCAATAGTTTGTGGTGTAGCTAATTTGAGAAGCATTTAATTCCTACATACCATTCCAAACTGACTAT TTATCTTCAGATTGAATTTAAACTTCTTGCATTATTTTACTCTGCAATCTGTATTCTTTCGTTTGTTTATGGGGATGGTA GTTGAAATTCGTAATTAAACTATCTGATAGAGCATGCATTTTTTATCTTGTGAGAGAATTTTTCATGTAATTAACTTGTG CTCATTTACCAGGATAAGTGCAAGTGACACAGATAATTACCACTTCATCATCCTTCATGATCTTCTAAGAGAGCTTGGAA TTTATCAAAGCATGCGAGCACCAGTTGAACAGAGAAAAAGATTCATTATTGACACAAGTGAAAATGAGCGTAAATGGTGG TTTGGGGAGAAGCAGCAAGGCATGATGTCCCGCATGCTGTCAAAATTTCGTAGAAGGTGTATCAAACAGAATCCCCAACT GGTCCCTGCCCGCACATTGTCTATATCAACTGGTTAGTTCTACTTCAACCTTTCTTTTGATATATCAATTGCTGTGATCC GTTATTCATGCTTCTTCCGTAATTGACACCATATGGGTTACTTTTGCAGACGAAAGTTGCGCTTCACATTGGTCATACAT ACAACCAGCTCAAGCTGAGGTTTTGATTTTAAATCATCAAACTAAGAAGTACTCATTTCCAGAGTTCATGGAGAAGTTGA GTAAACTAAAAGTTCTGACCGTAACAAATTATGGTTTCCATCCTTCTGAACTGAATAATTTTGAGATACTTGGCTCTTTG TCCAACCTGAAAAGAATAAGGCTAGAGCAGATTTCTGTTGCTTCCTTTGGCACTTTGAAGAATGTTAAAAAACTATCCCT CTACATGTGTGATACAAGATATGCATTCGAAAAATGTGAGATCCGAATTTCAGATGCATTTCCTAATCTTATAGATTTGA ACATTGACTACTGCAAAGATATGGTGAAACTCCCTACTGGGCTCTGTGATATCACCCCTCTAAAGAAACTCTGCATTACA AATTGCCACAAGCTTTCTGCGCTGCCCCAAGAGATCGGAAACTTGGAGAATTTGGAACTATTGAGGTTCAGTTCTTGTAC TGATCTAGAAGGGATACCAGATTCTATTGGAAATCTTCCAAACCTGCGGCTTTTTGACATCTCAGACTGCCTAAGCCTTC CAAATTTACCAGATGAAATTGGTGATCTGCGTAATTTAAGAAATCTCTACATGACTAGTTGTGCAGCATGTGAATTGCCA GCCTCTGTCATCAATCTTGAGAATTTAACGGTGACATGTGATGAAGAAACTGCTGCTTCGTGGGAAGGTTTTGAACCTAT GATGACCAATCTGAAAATAGAAGTTCCTCACGTTGATTTTAACTTAAACTGGCTTCATGCAATTCCCGCCTGACACCTGC GTCATGCAACTTTCCTTGTTGTTTGGAATTTGTCATTGATCATGCCGGAAAGCAAAAGGAACAAAGACAAGGTTTGCTGT TAAGGAACTCATGAAACATAAGTTCTACAAGTCCAAAATGATTCTGAATTATCAGATCAGCAAGATTGAGTGGTGGAACA CTAAATCAGCACCATCTGGTGGTCTGGCACAACAAGGCGAGGGAATTGTCCCAGGTTCATTCAATTATTGATTCTGGCAT CAATGTGCTTGCATGTCTCAAACAATAGCTTCCATGTTTTGGATCCTAAGGTGTGTGTTTGAGCACTGGTATGCGGCAGA ACTTCATGATGAAGTTTATTAGAGTTCATTGAAGAAAACTTATGAGCTGGTAAACCTGAATATGACTGATATTGTCACAA AGGCATTGTGGGTGGCTCTTGAATTATTTTTGGTTACAAGTGGAAGGCTCTTGAATAATTTGATTTGCTATGTGATATTA TTGCAATTTAGGGGTGTAAGCAGGCGGGCACGGTCCGATTCGCAAACCCGATGAAACCAAATCGAACCAAACATATTATA GCTGATTGGATTAGATCACTGGTTCGGTTTGGATTTTTTTTACTGCATCAATCACCATCGGTTTGGTATCGGATTTGAGG ATTAAAAATCCGACAAATCCGAACCAACACAATGGTATTGAGAACTTTTTTCTTACCCTTCAGTCCAAAGAGCAGCAGTT CATTACATAATGTTTGTTTAAGTTAAGAACTAAGTTTTATTTTTTTGAAACAAAGAACTAAGTTGCTTAGGAGTTGAATA TTATGTTGCCTATTTATGTTTGTATTGAAGATATTGGTTTTAGTTTATTTATGCGGTTTATATGGATTATGGAATGTTAT GTTCTTTTGAAGATGTTGGAT
CDS sequence (LotjaGi4g1v0109200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGACGTAGCTCAACTCGCTTTTCTTACATTACACTTGGATCCACCCAGAGAAGAAATCAAGACCCTTATCAGAGA AAAAGATGCAGGGGAAGGGGACAAGTGTCTCTGTTGGGGAAACTTTATCTCTTTGCTTCAACTCTGTGTGAACAAGCTTT GTCATAATAATAAAGATGATTTCTTAAATGTTGATGGTGAAAAGCAAGCTCAAATGGCTAATGATGTGAAGGACACACTT TACAAGGTTAGAGGATTTCTTGAGCTTATTAGCAAAGAGGATTTTGAGCAGAAATTTAGTGGAGCACCCATTAAGCGTCC TTATGGTGTTCCAGCAAACCCTGAATTCACTGTTGGGGTGGATGTGCCGTTGAATAAGTTGAAGGTGGAGCTTCTCAAAG ATGGTACCAAAGTCCTTGTGTTGAGTGGTTTGGGTGGATCAGGGAAAACCACTTTGGCTACAAAGCTTTGTTTGGATGAA CAAATCAAGGGTAAATTCAGGGGAAATATTTTGTTTGTTACCTTCTCAAAAACGCCCAACTTGAAGAATATTGTGGAGAG ATTATTTGAACACTGTGGATATCCGGTGCCTGAGTTTCAAAGCGACGAGGATGCAGTTAATCAATTGGGACTTCTGTTGA GGAAAATTGAGGGAAGTTCAATTTTGCTGGTTCTGGATGATGTTTGGCCTGGTTCTGAAGCCCTTGTTGAGAAATTTCGA TTCCGGATATCCGATTATAAAATTTTGGTGACTTCAAGGGTCACATTTCCTAGATTTGGCACCCCATGTATCCTAAAACC TCTTGGTCATGAAGATGCAATGACCCTTTTCCGCCACTATGCTCTCTTGAAAAAAAGCAATTCAAATACTCCTGACGAAG ATCTTGTACAGAAGGTTGTGAGAAATTGCAAGGGCTTGCCGCTTGCCATTAAAGTGATTGGCACGTCACTCAGTCATCAG CCTAATGGGTTGTGGCAGAAGACATTGAAGGAACTGTCACTGGATCATTCTATACTTGATTCTAATACTGAATTACTTAC CCAATTCCAAAAGATCTTAGATGTTTTACAAGATAATCCCATCATCAAGGAGTGCTTCATGGACCTAGCATTATTCCCTG AAGACCAAAGAATTCCTGTTGCTTCTCTCATTGATATGTGGGCCGAGTTGTATGGACTAGATGATGACGGCATAGAAGCA ATGGCCATCATCAACAAATTAGTCTCCATGAATCTGGCAAACCACTTAATAACAAGGATAAGTGCAAGTGACACAGATAA TTACCACTTCATCATCCTTCATGATCTTCTAAGAGAGCTTGGAATTTATCAAAGCATGCGAGCACCAGTTGAACAGAGAA AAAGATTCATTATTGACACAAGTGAAAATGAGCGTAAATGGTGGTTTGGGGAGAAGCAGCAAGGCATGATGTCCCGCATG CTGTCAAAATTTCGTAGAAGGTGTATCAAACAGAATCCCCAACTGGTCCCTGCCCGCACATTGTCTATATCAACTGACGA AAGTTGCGCTTCACATTGGTCATACATACAACCAGCTCAAGCTGAGGTTTTGATTTTAAATCATCAAACTAAGAAGTACT CATTTCCAGAGTTCATGGAGAAGTTGAGTAAACTAAAAGTTCTGACCGTAACAAATTATGGTTTCCATCCTTCTGAACTG AATAATTTTGAGATACTTGGCTCTTTGTCCAACCTGAAAAGAATAAGGCTAGAGCAGATTTCTGTTGCTTCCTTTGGCAC TTTGAAGAATGTTAAAAAACTATCCCTCTACATGTGTGATACAAGATATGCATTCGAAAAATGTGAGATCCGAATTTCAG ATGCATTTCCTAATCTTATAGATTTGAACATTGACTACTGCAAAGATATGGTGAAACTCCCTACTGGGCTCTGTGATATC ACCCCTCTAAAGAAACTCTGCATTACAAATTGCCACAAGCTTTCTGCGCTGCCCCAAGAGATCGGAAACTTGGAGAATTT GGAACTATTGAGGTTCAGTTCTTGTACTGATCTAGAAGGGATACCAGATTCTATTGGAAATCTTCCAAACCTGCGGCTTT TTGACATCTCAGACTGCCTAAGCCTTCCAAATTTACCAGATGAAATTGGTGATCTGCGTAATTTAAGAAATCTCTACATG ACTAGTTGTGCAGCATGTGAATTGCCAGCCTCTGTCATCAATCTTGAGAATTTAACGGTGACATGTGATGAAGAAACTGC TGCTTCGTGGGAAGGTTTTGAACCTATGATGACCAATCTGAAAATAGAAGTTCCTCACGTTGATTTTAACTTAAACTGGC TTCATGCAATTCCCGCCTGA
Protein sequence (LotjaGi4g1v0109200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MADVAQLAFLTLHLDPPREEIKTLIREKDAGEGDKCLCWGNFISLLQLCVNKLCHNNKDDFLNVDGEKQAQMANDVKDTL YKVRGFLELISKEDFEQKFSGAPIKRPYGVPANPEFTVGVDVPLNKLKVELLKDGTKVLVLSGLGGSGKTTLATKLCLDE QIKGKFRGNILFVTFSKTPNLKNIVERLFEHCGYPVPEFQSDEDAVNQLGLLLRKIEGSSILLVLDDVWPGSEALVEKFR FRISDYKILVTSRVTFPRFGTPCILKPLGHEDAMTLFRHYALLKKSNSNTPDEDLVQKVVRNCKGLPLAIKVIGTSLSHQ PNGLWQKTLKELSLDHSILDSNTELLTQFQKILDVLQDNPIIKECFMDLALFPEDQRIPVASLIDMWAELYGLDDDGIEA MAIINKLVSMNLANHLITRISASDTDNYHFIILHDLLRELGIYQSMRAPVEQRKRFIIDTSENERKWWFGEKQQGMMSRM LSKFRRRCIKQNPQLVPARTLSISTDESCASHWSYIQPAQAEVLILNHQTKKYSFPEFMEKLSKLKVLTVTNYGFHPSEL NNFEILGSLSNLKRIRLEQISVASFGTLKNVKKLSLYMCDTRYAFEKCEIRISDAFPNLIDLNIDYCKDMVKLPTGLCDI TPLKKLCITNCHKLSALPQEIGNLENLELLRFSSCTDLEGIPDSIGNLPNLRLFDISDCLSLPNLPDEIGDLRNLRNLYM TSCAACELPASVINLENLTVTCDEETAASWEGFEPMMTNLKIEVPHVDFNLNWLHAIPA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 9 | 773 | 765 | 0.0 | – | |
| PANTHER | 9 | 773 | 765 | 0.0 | – | |
| Gene3D | 102 | 256 | 155 | 1.1E-24 | – | |
| SUPERFAMILY | 104 | 369 | 266 | 6.35E-37 | ||
| Pfam | 124 | 333 | 210 | 3.7E-26 | ||
| PRINTS | 138 | 153 | 16 | 1.2E-19 | – | |
| PRINTS | 215 | 229 | 15 | 1.2E-19 | – | |
| Gene3D | 268 | 340 | 73 | 3.7E-6 | – | |
| PRINTS | 303 | 317 | 15 | 1.2E-19 | – | |
| Gene3D | 481 | 749 | 269 | 6.1E-33 | ||
| SUPERFAMILY | 516 | 740 | 225 | 4.08E-22 | – | |
| PRINTS | 686 | 702 | 17 | 1.2E-19 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi4g1v0109200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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