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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0111000 |
| Transcript ID | LotjaGi4g1v0111000.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Guanine nucleotide-binding protein subunit alpha-like protein; TAIR: AT2G23460.1 extra-large G-protein 1; Swiss-Prot: sp|O80462|XLG1_ARATH Extra-large guanine nucleotide-binding protein 1; TrEMBL-Plants: tr|V7CGC7|V7CGC7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0111000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:15859066..15864829) extracted from Lotus japonicus Gifu genome v1.2.
GTGGCTGCGGTGGTTGAGCAGGTTCCTGTCTCCGACGCACTGTCATTGCCGGTTGCGCAACCGCTCTCCACGGCGGAGCT TCACTGCTTGAAATTCCCCGCAGGCGACGACGGCGGTGGTTTAGTGAAAACGACGGTGTCTCCGACGTCGGTGATCGCGT TTGAAGACGGAGCTGCGGAGAGCAACGGCGTGTGCGACTCGTCGGGCGAGTTGAGCAGCGAGTCTTCAGACAGTTCAGGG AGAATCACATTGCTGAGGGATTCCAATTGCGAGAAAGAGAGCTTGGATTTCAACGGCTCCACACCGTTGAGTTCATTCTA TCCATCGTCTCGTGCTTCGAATTCGAAGAACGACGATGCGAAATGCGAAACCGTTGCTGTGACTTTCAACGTGGATTCCG ATGACGAACCGGTGAAGAGGGAAGCGGCGAGGAAGGGGAAGAAAGGATCATGCTACCGGTGCTTGAAGGGTAACCGTTTG ACGGAGAAGGAGGCGTGTCTGGTTTGTGATGCTAAGTATTGTGGGAACTGTGTGCTGAGAGCGATGGGTTCAATGCCGGA GGGTAGAAAATGTGTTGGGTGCATTGGGTACCCAATTGATGAATCCAAACGGTGTAGTTTGGGGAAATGCTCTAGGTTGC TCAAGAGATTGCTCAATCACTTGGAGGTTAGACAAGTAATGAAGGCTGAGAGGTTTTGTGAAGTGAATCAGCTTCCTCCT CAGTGTGTTGTTGTCAATGGAAGTCCGCTTTCGTTCGAGGAACTCGTCGCGTTGCAGAATTGTGCTAATCCGCCGAAGAG GCTAAAACCCGGGAACTATTGGTATGATAAAGTATCTGGTCTTTGGGGGAAGGTAAATACTAAATAGTTTTCTCCTGCAT TGTTTTCTACTGCTTGAAATTTTGAGTTTTATGGAAATTGATATTATTTTTGTGTTTTTTGAATTTCGCAGGAAGGACAG AAGCCTTGTAGAATTATTAGTCCCCATTTGAATGTTGGAGGTCCAATCAACCCGGATGCGAGTAACGGAAACACTCAGGT TTTCATCAATGGCCGGGAGATAACAAGAGTTGAGCTTCGGATGTTGCAGGTTCAAATTTTAATATATGCAGAAAAATGGC TCTATCTTAATTAATTTTCGTTTGTTGTTGAAGTAAAACAAAATTGTTGAAAGGATCTTGTTTTGGTTGGGCAGTTGGCA GGAGTGCAGTGTGCTGGTAACCCACATTTTTGGGTCAATGAGGATGGTTCATACCAAGAAGAAGGACAAAAAAATACAAG AGGGTATATATGGGGAAAGGTAAAAAAAAACTTATGTATCATTTTTCTCTTGTTTTATCCCTGTGCCAATGTTCATTTTA CATTATTTGACCATTTAATTTCACTTGTTAGGCTGGAACAAAGCTTGTATGTGCCTTATTTTCCTTGCCAGTTCCTTCTA GACCTTCGACTTCCTGTGGGTTTCTATCCTCCAATCTGATTACTAAAACAGTTCCTGACTACCTTGAGCATGGAATAGTT CATAAGCTCCTCTTAGTTGGTTACACTGGGTCTGGAACAAGCACTATTTTTAAGCAGGTGATTTTCATTTGATAATTGAG TTTGTTAATTCTGTCTGCATATTGTGTCATGCTTAGAACTTTCTTTCAAGCAGGTAGGTTACATTGAACAATATATGGTT GTAAGCATGAGAATCAATATTAGCTATGTTAATACACCAACATATTGTGAGAAATTAACACACATTATTTGTGCACACAC ACATATATATATTTGTATTAAGAAAAAACTTGTGGGGTAGTTGCCCCCACTAGCTATATGTAGGTCCGCCCTTATACATA GGCATTTTAAACATTGTTGACTGACTATTAAGGTGTATTAAAGCTATTTAAGGAGTATGATGTATGACCTGGTGTCTGAA ACTTCATTTACTTTTAACAACCCCCAACCCAAAAAAGAAAAAAATTTGATGGCATTGCTGTTAATGATTAGCTACTTTGT AGTACTGTTCTTTGTCAACATGCTTGATACTAAAAGCTAAGAATTCAACATATTTATAGAACTGTAAATCCTTATGTCAG ACCAAGATTCTTTACAAAAGTACACCCTTCTCAGAAGATGAACGTGAAAATATTAAGTTGACCATTCAGACCAATGTCTA TGCCTATATTGGCATGCTTCTTGAGGGTCGTGAGCGTTTTGAAGAAGAAAGTCTGGAGAATTTAAAGAAAGGTCAATCAT CTGCACTTGACACGACAGGTTAGTGATCAATGTTCTCCCTCCTTTCCATACCCTCACTGAAATATGTCTTTTAATTGAGT TTTGACTTTTGACTCAGTAGCCAAGGTTTCTTCCTTGTAAAGCACCACATATGTGGCTTAGTATGCATTGACTATTTGCC ATGTAGTTGCTGACTTGCAAGTCCAAGTGATTTTCAGCTAGCTTATACATGTATTTAAAGGGGTAAAATGTTTGCTTTGA AGATAAAATGATTGTATCTTACCTTGTTTTTTCCAAGTGACCCATTATGGAGTAAGCATTCAAACAAATAGTCATAAATA TGCATTTATTTTGTTTTGGGGAATTTGTTCATTGGAATTATTTTATCCAAAGTAAAATTACTGATGTATAAAGTTGTCTC CTTATTATATGAAGCACAGGTTTGTGTATCAACTTTCTGGACGGCCGGACCACAGATCATGTGGGAAAAAGCTTTTGTTG TTGTTGATAATGATGACTAGAAAATATGTCAGAACTTAGAAAATATGTCAGAACTTTGAGATGCCACAAGAGATAGATTT CATGTGTGTTTTAAAATTATGAATAATATACTTGTTGAGTTTTTTCACGTAGCAGTAAGTACTCTTTCTTGTAAACTTTA AATATCTTGATATGCAGAATCAAATGAAAACAACACATATATGCTACTAAATACTAGTAGTTACTAAAATAATTTAGGAC AAATGCTGCATAAAAGACTATCAAATCACTTTTTAGTTTGTCCATTCAACTAAAAGATTGGCAGGTTACAATTATGGTGC AGGAACCATTCCAAAACATGGGGACAAGACAATTTATTCCATTGGCACAAGACTAAAAGCATTCTCTGATTGGCTTCTGA AAACTATGGTTTCGGGAAAGCTTGATGCTATCTTTCCTGCTGCTACTCGTGAATATGCTCCATTAATTGAGGAGTTATGG GATGATGCAGCCATTAAGGCCACATATGAAAGAAGATATGAAATAGAAACGCTACCCAGTGTTGCCAGTTATTTTTTAGA GCGGGTATAGGATCATTCTTTTATTTTAAGCTTACTTTGTCAACAATTTAATCTACAAAAGTATACCCTTGTTAACTTAC TTGCATGTGACCTTTTAACTGAATATTGACATATTTTATGATGATTATTTTGTTGTGAAGAGTAATTATTGAATGTTCCA TATAAACTTATATTTGTATGAATTTTGGTAGTGGAAATGCCTCTTATTCTATCAAAGGAATTTAGCTTCAATAATATTAG GTTTTTTGCAAAATGAGCAAACTGATGGAGGGATATAGATTTACTTTTGACAAGGTACTTAGGTTAATGTTTGTGCAAAT AGGTGGTGGTGGTTCAATGGTTCATATATACTGTCATATAAGGATCTTTGATCAGGCAAAGGGAGTGTGACAGTTATGGT TATGGTCCGGAGTCCGGACATTTGGTAGAAGCTTTAGTTTGAAGAGTAATAAGCTTAATGTGTTCAGTATAAACGAAAAG AGCTTAGCGAATGTTTTTTGCTCTCTCAAGCTCATATAGTTAGCAGGACTTACATTTAGTTTTTAGGCTTGTTGTTAATG CTTGCTAGTTCATATGTTGGTCACAAGCAAAACTCAAACCGCTTTATATTTTACCAATTAAGAATGATTCATCAGGATTA CTTTTGCTGATATTTGCACCTTGTGGCGTACCCTTATCTTCTTATATGTTTCTTTTCTATTGGTTTTCTCTAGAAAAAGA TTGTTAGGTTATTATTGGCTTTGAGAATTTAACATGTTATTTCTTTGTTTAGGCTGTTCAGATATTGAGTACTGACTATG AACCCTCGGATTTAGATATCCTCTATGCTGAAGGAGTCACTTCATCCAACGGTCTGGCTAGTGTAGAGTTTTCATTTCCT CAATCAGCTCCTGAGGAAACTGGCGATACTGCTGATCTACATGATTCTTTGGTTAGGTAGGTGAAAATATTTGCCACTAT TGTGATATTTGCTTTTGGGGAATAATTGCACTCTGTGAAATGCCAAGGGTAGTAACTGATAAGGCTATACACCACGACCA GACAACAACAACAAACACAAAACGGAGTTGATGAGAGACTTATTTCCCCCAGATGTCATCAAATGTTTTTTTACCCCAGA GAAAAATTCATTAAGAAAAGAAAAGAACAAATGTAGAGGACAAAGACACTCTCACATTCTCTCAAGAATAAACTTAAGAA AGATCTAGAAACTATGTTGAGTCAAGTAACAAGGCATGCCAATCTCTCTGCATGTCTAACAAAGAAATACCTTTAAAAAC TCCATGAACAGAACACCACTAATAGGCCAAGAAAGTGGCCCTATTCCAAATGTTGTCTTGGGATGATTAAAGTGCCCCTG AAATTTCTAACATTTCTTTGAAGCCAAAGTCTCTAAAGAACAGCAAAGACAGCTCTGCCACAGAATTTTCAGATTCCTTA CGAAAGCCAAATCCTTCAAATTTAATAAAGGACACCCCAATTCATGTCCTTAGAGCTGATCCAATTGTCACAGAAAATTA GTTTTAAGCTTTGGTTTCCTCTGTTTTTGCATTTACCAAACATTGTGGAGGTTCTTTCCAGCAGCATGAATGTGATATAC TACTCGTATATCAGAAAGAGCCAAAGAGGTGTTATCAAAATGCAATTTTAGTCAGGTTTACTATTAAAAAGTTACCCCTG TTTCATATAGCACAGATACGTTCAAATTTATTTATTTGTTTCACATGGCTTGGAATGCTTGTTTCCAAAGTTACATCTCA ATTCAAGTATGTCAGAAACATGTGACGCTGTTGCTGATTTTTATATGTATGAATTTGAGTCAAATGTTTCATGCTTAGAA ATAGACCTCATATGACCGTGTTTCTGATCTGGAGCTTGGATCTTTTTGGCTGGTTTATAGGTATCAGCTAATTACAATAC ATGCAAGAGGGCTAGGAGAAAATTGCAAGTGGCTAGAAATGTTTGAGGATGCTGGAATGGTCATCTTCTGTGTATCCTTG AGCGACTACAATCAGTTTTCTATTGATGGAGATGGTTGTCTCACAAACAAGATGATATTGACCCGGAAGCTTTTTGAAAC CATTGTTACTCATCCAACTTTTGAGCAAATGGACTTCATGTTGATACTGAACAAACTAGACGAGTTTGAGGAGAAAATAG AACAGATTCCACTGACTCTGTGTGACTGGTTCTCTGATTTTCATCCAGTAATTAGCCGTCACGGCCGTGGCAGCAACAAC AACCCCTCCCTTGGTCAGCTGGCTTCGCACTACATAGCAGTTAAGTTTAAGAGGCTCTATTCATCTCTCACAGGGAGAAA CTTGTATGTATCTCTGGTAAAGGGGTTGGAGCCTGATAGTGTTGATGCAGCACTTAAATATGCAAAGGAGATTTTGAAGT GGAATGAAGAGAGACCAAACTTTAGCTTAAGTGATAACTCTATGTATAGCATTGAGCCGAGTTCATTCTCTCTTTGATTG CTAG
CDS sequence (LotjaGi4g1v0111000.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTTCAATGCCGGAGGGTAGAAAATGTGTTGGGTGCATTGGGTACCCAATTGATGAATCCAAACGGTGTAGTTTGGG GAAATGCTCTAGGTTGCTCAAGAGATTGCTCAATCACTTGGAGGTTAGACAAGTAATGAAGGCTGAGAGGTTTTGTGAAG TGAATCAGCTTCCTCCTCAGTGTGTTGTTGTCAATGGAAGTCCGCTTTCGTTCGAGGAACTCGTCGCGTTGCAGAATTGT GCTAATCCGCCGAAGAGGCTAAAACCCGGGAACTATTGGTATGATAAAGTATCTGGTCTTTGGGGGAAGGAAGGACAGAA GCCTTGTAGAATTATTAGTCCCCATTTGAATGTTGGAGGTCCAATCAACCCGGATGCGAGTAACGGAAACACTCAGGTTT TCATCAATGGCCGGGAGATAACAAGAGTTGAGCTTCGGATGTTGCAGTTGGCAGGAGTGCAGTGTGCTGGTAACCCACAT TTTTGGGTCAATGAGGATGGTTCATACCAAGAAGAAGGACAAAAAAATACAAGAGGGTATATATGGGGAAAGGCTGGAAC AAAGCTTGTATGTGCCTTATTTTCCTTGCCAGTTCCTTCTAGACCTTCGACTTCCTGTGGGTTTCTATCCTCCAATCTGA TTACTAAAACAGTTCCTGACTACCTTGAGCATGGAATAGTTCATAAGCTCCTCTTAGTTGGTTACACTGGGTCTGGAACA AGCACTATTTTTAAGCAGACCAAGATTCTTTACAAAAGTACACCCTTCTCAGAAGATGAACGTGAAAATATTAAGTTGAC CATTCAGACCAATGTCTATGCCTATATTGGCATGCTTCTTGAGGGTCGTGAGCGTTTTGAAGAAGAAAGTCTGGAGAATT TAAAGAAAGGTCAATCATCTGCACTTGACACGACAGGAACCATTCCAAAACATGGGGACAAGACAATTTATTCCATTGGC ACAAGACTAAAAGCATTCTCTGATTGGCTTCTGAAAACTATGGTTTCGGGAAAGCTTGATGCTATCTTTCCTGCTGCTAC TCGTGAATATGCTCCATTAATTGAGGAGTTATGGGATGATGCAGCCATTAAGGCCACATATGAAAGAAGATATGAAATAG AAACGCTACCCAGTGTTGCCAGTTATTTTTTAGAGCGGGCTGTTCAGATATTGAGTACTGACTATGAACCCTCGGATTTA GATATCCTCTATGCTGAAGGAGTCACTTCATCCAACGGTCTGGCTAGTGTAGAGTTTTCATTTCCTCAATCAGCTCCTGA GGAAACTGGCGATACTGCTGATCTACATGATTCTTTGGTTAGGTATCAGCTAATTACAATACATGCAAGAGGGCTAGGAG AAAATTGCAAGTGGCTAGAAATGTTTGAGGATGCTGGAATGGTCATCTTCTGTGTATCCTTGAGCGACTACAATCAGTTT TCTATTGATGGAGATGGTTGTCTCACAAACAAGATGATATTGACCCGGAAGCTTTTTGAAACCATTGTTACTCATCCAAC TTTTGAGCAAATGGACTTCATGTTGATACTGAACAAACTAGACGAGTTTGAGGAGAAAATAGAACAGATTCCACTGACTC TGTGTGACTGGTTCTCTGATTTTCATCCAGTAATTAGCCGTCACGGCCGTGGCAGCAACAACAACCCCTCCCTTGGTCAG CTGGCTTCGCACTACATAGCAGTTAAGTTTAAGAGGCTCTATTCATCTCTCACAGGGAGAAACTTGTATGTATCTCTGGT AAAGGGGTTGGAGCCTGATAGTGTTGATGCAGCACTTAAATATGCAAAGGAGATTTTGAAGTGGAATGAAGAGAGACCAA ACTTTAGCTTAAGTGATAACTCTATGTATAGCATTGAGCCGAGTTCATTCTCTCTTTGA
Protein sequence (LotjaGi4g1v0111000.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGSMPEGRKCVGCIGYPIDESKRCSLGKCSRLLKRLLNHLEVRQVMKAERFCEVNQLPPQCVVVNGSPLSFEELVALQNC ANPPKRLKPGNYWYDKVSGLWGKEGQKPCRIISPHLNVGGPINPDASNGNTQVFINGREITRVELRMLQLAGVQCAGNPH FWVNEDGSYQEEGQKNTRGYIWGKAGTKLVCALFSLPVPSRPSTSCGFLSSNLITKTVPDYLEHGIVHKLLLVGYTGSGT STIFKQTKILYKSTPFSEDERENIKLTIQTNVYAYIGMLLEGRERFEEESLENLKKGQSSALDTTGTIPKHGDKTIYSIG TRLKAFSDWLLKTMVSGKLDAIFPAATREYAPLIEELWDDAAIKATYERRYEIETLPSVASYFLERAVQILSTDYEPSDL DILYAEGVTSSNGLASVEFSFPQSAPEETGDTADLHDSLVRYQLITIHARGLGENCKWLEMFEDAGMVIFCVSLSDYNQF SIDGDGCLTNKMILTRKLFETIVTHPTFEQMDFMLILNKLDEFEEKIEQIPLTLCDWFSDFHPVISRHGRGSNNNPSLGQ LASHYIAVKFKRLYSSLTGRNLYVSLVKGLEPDSVDAALKYAKEILKWNEERPNFSLSDNSMYSIEPSSFSL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 630 | 630 | 0.0 | – | |
| PANTHER | 1 | 630 | 630 | 0.0 | ||
| SMART | 208 | 587 | 380 | 1.4E-14 | ||
| ProSiteProfiles | 226 | 623 | 398 | 57.52 | – | |
| SUPERFAMILY | 227 | 609 | 383 | 2.04E-19 | ||
| Pfam | 228 | 605 | 378 | 4.6E-60 | ||
| CDD | 228 | 609 | 382 | 8.82218E-76 | ||
| PRINTS | 229 | 244 | 16 | 4.8E-6 | ||
| Gene3D | 229 | 584 | 356 | 5.1E-66 | – | |
| SUPERFAMILY | 256 | 405 | 150 | 7.06E-20 | ||
| Gene3D | 257 | 408 | 152 | 5.1E-66 | ||
| PRINTS | 395 | 417 | 23 | 4.8E-6 | ||
| PRINTS | 465 | 493 | 29 | 4.8E-6 | ||
| PRINTS | 513 | 522 | 10 | 4.8E-6 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. | ||
| Biological process | G protein-coupled receptor signaling pathway | A series of molecular signals that proceeds with an activated receptor promoting the exchange of GDP for GTP on the alpha-subunit of an associated heterotrimeric G-protein complex. The GTP-bound activated alpha-G-protein then dissociates from the beta- and gamma-subunits to further transmit the signal within the cell. The pathway begins with receptor-ligand interaction, or for basal GPCR signaling the pathway begins with the receptor activating its G protein in the absence of an agonist, and ends with regulation of a downstream cellular process, e.g. transcription. The pathway can start from the plasma membrane, Golgi or nuclear membrane (PMID:24568158 and PMID:16902576). | ||
| Molecular function | Guanyl nucleotide binding | Interacting selectively and non-covalently with guanyl nucleotides, any compound consisting of guanosine esterified with (ortho)phosphate. | ||
| Molecular function | G-protein beta/gamma-subunit complex binding | Interacting selectively and non-covalently with a complex of G-protein beta/gamma subunits. |
Expression pattern of LotjaGi4g1v0111000.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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