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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0117600 |
| Transcript ID | LotjaGi4g1v0117600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ADP-ribosylation factor family protein; TAIR: AT2G18390.1 ADP-ribosylation factor family protein; Swiss-Prot: sp|Q9ZPX1|ARF5_ARATH ADP-ribosylation factor-like protein 2; TrEMBL-Plants: tr|A0A0L9URD7|A0A0L9URD7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0117600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:16991856..16997900) extracted from Lotus japonicus Gifu genome v1.2.
CAAAGGGCCCAGCCACCAGACCCATCTTCTCCACCGTCCTAATTCATCTCCGTCGTCCAAGCACCGCCGCCACCGCGCCA TTCTCCGCCACCAGAGGCCAGCATCGTTCACCCGGCGATCTAAGAATGGGTCTTCTTAGCATCATTCGGAAAATCAAAAG GAAAGAAAAGGAAATGCGAATTCTTATGGTGTAAGCACTGCTTGTTACTTCTACTGCTCTCTTCCCTTCAATTTCTCTCT AGATTAATTTAATTTCATTATTTCAGTACAGTAGTAGTAGTAGTAACATTCAAAATCACCTCTTGTGTAGTGGATTGGAT AATTCTGGCAAAACCACTATCGTTTTGAAGATTAACGGGGAGGACACTAGTGTCATCAGTCCCACCCTTGGCTTCAACAT CAAAACCATCTCCTACCAAACGTAATCAATCTTTCCCTCTCTGCACAAAATCACTTATTCTGTATCATGTAATATATTTT ATTAGCTCTTGAGTTTTAATTAAAAGTGCATGGTGAAATTGGTTGTTGGAAGTGTTGGGCGCCGGCAAGTATGTCCCTAA AAGAATGAAATACCCCGCGGTCCCTGATTGTTTAAAATACGTTTCATATGACTACTAGGACTAACTTGACCGACATTTTG CACAATTAAGGACCACGGGCGCGCGGGGTATTTCTAAGTCCATGGTTGAACTTGCTAGTGCCCAACACTTTCAGGAGGCA TTTTTGACAAATTCACTCTCTAATTAAACATGATGATTTCTACAATTTGTTTAAGGGGAAAGCATGTGATCTTTTACTTC TTAATTTGGAGTATAATTGGTTTGTTTCTTGAATATCTGTGGAAGCTTTTGCTTGTAATTCCTTCAAAGAATGTTGTTAG CCTTTATTTTTGCTTAGTATCTCAGTGCGATTTACTTTACTCTAGAATGTTAAGGCATTTTTATCCACATTGACAATGAC AGTTACACTCTGAATATATGGGATGTTGGGGGCCAGAAAACAATACGATCTTACTGGAGGAACTACTTTGAGCAAACAGA TGGTTTGGTTTGGGTAGTTGACAGCTCTGATCTCAGAAGGTTGGATGACTGCAAAATGGAGCTAGATAACCTTCTAAAGG AAGAGGTTTGTTCAATACAAAATGGTTTTTGCTTATTCACCTAACAAACTGCTTACATGTTATACTTAACTGAAAATATT CAGTCATTTTTTCTACCACTTATTAATTCATGTCCAATATGTTTGATCAATCGATTGGCATAAATCACTGTGTCTCTCTA TCCAAGCGCAGTCATTGCTTAAAGTGAATGCTTTGCAAGACAGCTGCTTTCCTTTTAAATGGTTACCAAAATTAAATTAA GTACTTCAATTTGAAAAAGATATTTGTCTTTGTTTTACCAAAACAAGCTAATAAGTGTTTCTCATTGTTGCTAATTTGGA ATGCTCAAATGATTATTGTTTTCATTGTTGGGGGCTTGTGAAGTACTGGTATTTACAAATCTCAATAGTTTTATGTTTCA AATGACAGAGGCTATCAGGATCTTCCTTACTGATACTAGCAAATAAACAGGACATTAGAGGCGCACTTACACCTGATGAG ATAGCTAAGGTAAGCTTACTTTTATTTGGGGAAGGGAGATGGGCCTTTCTCTCTGGTCCTCTCAATCATCTCTTGCAGTA GTTTTTTTCTTATTTAAATAATTACTCACAAAACTACTCGTAGAAATAGCTGGAATCAAGTCTCAACCAGGGAGTTTAAA TGTCCAACCATAAGTAGTTACAGTACCATTCTGAGACAAATTTTACATAATAATCTTTTCGGGCGCTGAACTTTGTCTTG GTGTGTATTTATGGAAATGGAGTCAGGGAGCATGGTTGTTAAATTTATCTTAAATGTTGTGTAAAACCAATTATGTTTAG GACTTTTTGCAATATTTGTTGACTGAACATTATATTATGAGCTGATCTTCTATTTAAACAATGGTCATTGAGAGGTAGTA AGTTCCATGCATGGACGATCCTACTTCATTGAATTGAATGTATTAACAAATCAAAATTATTCATCTTGTAGATTCGAACT GACTAATTTGTAATTTTAATGATCTTCACTTTATAAGGAGTAAGGTTAGTCCTGTGCTTCAAAAGATATGTTAGGTGATA CACGGAAGCAACAAGAGTGTTTTCTCACTAGGTGGCATTGACCACATGGATAAAAAATTGTCATAATATGTAGTACACAT TTGACAAAATTAAGTCAAATAAGTAAAATAGTTCATTCATTTGTCAATTCTGGAACCCTGAATAAGGCTATGTTTGGATA AAATAGGACGGAATGGAGTGGAGTGAAATAAAATAGAATAATATTACACTTTCATTGACTGGTCTTTTTAATGGAATGGA GAAAAGTACTTGTTTTATCTCATCCCCCCCCCCCATATTGGATGGAATGGGTTGGAATGCATTCCATCATGTTCTACTCA ATTTCATTCTGTTTTAAAAAATTCAAACAATGGAATCTGTTACGATCCCATTCTTCTCCATTCCATCAATTCAAACATAA CTTGATAGAAGCACCCCAAGCATATTCTCACAGTAATGTTTCAGCAGCTTTGAACTGATCTCAGTAGTTTTGGCTTCAAA TTTGTTCGAAGTACTCCATAACCATAAATTGATAAGTATTGCAAAATTTGAATTTTACTTGCTTTTAGAAAACAAGGGAG CTAATTGTTAGATATAATTAATATATAATTGTTTCTTGTAAGTTTTAGATTTTCTAATCTGTGACTGTGCAGGTGCTGAA CTTGGAAGCTATGGATAAATCTCGGCACTGGAATATAATTGGCTGTAGTGCATACACTGGTGAGGGTCTTCTTGAGGGAT TTGATTGGTTGGTCCAAGACATAGCCTCTAGAATCTACATGCTTGACTAAAGATTCTTACGCCAGTAGTCATGAAATGGT TCAACTTAGAAAAGCATCCTTAACCTAATATGCTGTCATTGAGGACATTGTCTGCTGCATCAATGAGATGTTCCGGATGG GATTCTTATCTCTCTCTTTTTCTTTTCAATTCAAGCTTGTAGTCTTGTAAGGGATCGAAATTTGTATGAGGGATTTGTTT GCGCAAGATCATGTGTTCAAATTCATTGTCATCACACTCTCCCAAAAAGAAAACCAAGTTTGATATATTTTCCGTGCAGA TGAAGTTGAGAAATAGGAAAAGAAAAAGCTCCCATCTGTGGATATAATCGTGTATTATGAGAAAAAAAGAGTCTTCTTTG GGCACCATTCTATTATTTTCTTTTATTTTTGTTGGTTAGCAGTTGAACACAGCACCATCGGCATCTGCAACAAGCTTTAT GCCATGCATTCAAAACTTGGAAACAATTACATAACAGCCTTTTTCAGCTCATGATAAAACAAAAATCAGCAACATCTCAT GTTCTTGTTTGTATTTTGTAGTATTACATGGAACATCAGAGTAAAATTGCCTTAAACTAGGTATCAATCGGACTAAATTG TACTACTGCAGCAGCTATAGAGCTTCCAATAGGAGTTTCTCTGTAAGAGCTTTTGAAAGTCCCATCACAGTATCAGCTGA CCCAACCTGTAACAAGGATCACATCGCTCATTTTGTTAAGGAAACGGAGAAAAGAGGGATGCATCCACATTTATCTTAAA ATATCACTCAAACATTCTCGAAAAATAACTCCATTTGCATAGATGTGTGGGAAATGCGTAAAAGGTTAAAGCTACAAATA TTTTCTTGCCCATATATTGGAAAAAACCAAGAACTGGCAAAAGAGATTACAAAATTTCAAAATTGGACATTTGGACCCAT GAAAAAGGCATTGAGTGCAAGTTTGGAAAATTTTCTGCAATTGATTCTAAAGTAAAAATCAATTCAGGAGAGAAGCATCT CAGAGAGTAGTTTTTAGGTGTTAGAATTTGATTCTAAGGAAAGGGAAATTGATCCATATATCATATGAATGTGATGCACA TCATGAATCGATTTATGCCACTTGGGTCTATACTATCGATTGCGAATAACTTCTTGAGAAAGCAAGATAACTTACCACTG CGTCCACAAAGGGTAAGGTCAAGGGGTGTTCCAGCATCAAACCCCCAGCAACATTGAATGTAACTCCCTCTTCAATCTGA GAAGCTCCCATCAAATAAGAAAACTCATAGTATTCAGGTTGACAAGAATTTCCTGAAAGAATTTCAAAAGATCATATGTT TTGAGAACTGGTTAAAGTACTCTTTTCACCTTCATACTTAGCTCAGTGCAAGGGTGAAAAGTGTACTTCTAAAAAAATTA CCAGATTATCAATGACCTCGTCTGGTATTTCAAGGAAATAAACCTGTCATTTAGTGACAAATGTTAGTAACCTGTCAAGT CAAGAGACATACTGAGTTCATGAATAAAATGTATCAGTAAAACAATAAGGCCTGGTTGGTAGCTAAAAAATTTGAGCTTG ATGGAGATAGGGGAAGAGGGATGGAAGAACAGGTGTCTCTCTTTTTCAGGTGAAGAAGAAAATTTCTTTCCCTACAATGA ATCCTTTTAATACTTAGCACAGTCAACAAATAAGTAACATTGAAAATCCATTTCCAGCATCTAATCTTTATGTTGAAATG CACTAGGAAGAACCTAGCTTATGAACCTAAAGACCCAAATGGCATAAAACAATTCGATTTTTATTGACACAGAAGAACCT AGCTTATGGATTAGCTCAAGCACCAGCAACCTGTACCTCTGCACTTTCCCATCCCCCACAACGTTTTCCAGTTGTGAGGT TAGTTACCACAACAGACCCTACCACAGCTGCATGACTACCAGAGTATCCTGCAAATAACTCAAATTCCTGAATACGGCCG ATATATCTGCCTATAATTCCCAACAACAAAAGCAGGGGGCCAAAATTCATTATGCTAACCTTTGACGAATTCTCGTGCTT CTTCTTCACTAGTTGGTTTTTCTCTGATTATTCCTCTGTACACCACAACCTACAAAACATTATTAGCAACAGTCGTACAA AAGTTTCGACTTAAACCAAAAGAAAATCAGTAAAAGGTGACCATATAGGATTTAGACTGTAAATAGAAGTTTACGCAAAA GTATATAGAATGTAAGATGTGGGGATATTATGCAAAAAAGTTTAAATAGACAGCACAGGTTAACCCCGACAGTTTCAGAA TGAAATGCGGGGTGTGCAATTAAAGATCTGATCATAAAAATTAATGAAGTTTGATTTTAAAATATAAACTTCTCGTTTTA TAAAATCAATCAAATGGATGTCAATTTTACAGTTCAAAAAGAAACTGTGGACGACCAAATCCTACACAGCACAGTGCCTA AGCCAAATATTTAGCCTGAATTGTAACAAAATGGAATTTGCATTGGAGATGGTTAATACACCTGATACACAAGTACACAA CTAAGTTTTATGAATACTTTCTGCAGGTTTATCTGCTTTAATTTTTACTATCTTTCTCCATATAACTAATCTTTTTCATG TAGGAAGTTACATCTTGTAACAAGCTTCTGCTTTAGAGGATTCCTTATTTTTGTCCAAGATCTGCGTTCTCTGTTTTCTT TCTGCTAACATACTTATTTTATCAAAATGAAATTAATTTATATGATTTTAGACAGAAACTAGAATGTAAACTGGGATGGG CTATTGAGTCAGTAAGGCCTTGGCAGAAACTAGAATAGAGATAGAGTAACATAGATATTATCTGTAAAAGGAAAATTAAA GTCATGTTTTTCTGCTTTATGCATATGCATATAAGTTAGCAGACATTTCTTATAAGCAAAAAAATAGTGAAAGACAACAA GAACAGTACATACAGTGTCAGCAGTAATTAACAGTGTTGCAGAAGCATCTTCCTCCAATGGACCTTCAGCAAGGAGCCTT TGTACAATAGCATCAGCCTAATAAGAATATCAAGGTCAGGACACTAAATGCACTATGGAACAATCAATTTGTGAGGAGAG TTTCAAATTGCTCATGAGTACAAGTACAACCTCTCAACTTAATGT
CDS sequence (LotjaGi4g1v0117600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTCTTCTTAGCATCATTCGGAAAATCAAAAGGAAAGAAAAGGAAATGCGAATTCTTATGGTTGGATTGGATAATTC TGGCAAAACCACTATCGTTTTGAAGATTAACGGGGAGGACACTAGTGTCATCAGTCCCACCCTTGGCTTCAACATCAAAA CCATCTCCTACCAAACTTACACTCTGAATATATGGGATGTTGGGGGCCAGAAAACAATACGATCTTACTGGAGGAACTAC TTTGAGCAAACAGATGGTTTGGTTTGGGTAGTTGACAGCTCTGATCTCAGAAGGTTGGATGACTGCAAAATGGAGCTAGA TAACCTTCTAAAGGAAGAGAGGCTATCAGGATCTTCCTTACTGATACTAGCAAATAAACAGGACATTAGAGGCGCACTTA CACCTGATGAGATAGCTAAGGTGCTGAACTTGGAAGCTATGGATAAATCTCGGCACTGGAATATAATTGGCTGTAGTGCA TACACTGGTGAGGGTCTTCTTGAGGGATTTGATTGGTTGGTCCAAGACATAGCCTCTAGAATCTACATGCTTGACTAA
Protein sequence (LotjaGi4g1v0117600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGLLSIIRKIKRKEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNIKTISYQTYTLNIWDVGGQKTIRSYWRNY FEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLSGSSLLILANKQDIRGALTPDEIAKVLNLEAMDKSRHWNIIGCSA YTGEGLLEGFDWLVQDIASRIYMLD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SMART | 1 | 181 | 181 | 8.3E-51 | – | |
| PANTHER | 1 | 184 | 184 | 9.1E-104 | – | |
| PANTHER | 1 | 184 | 184 | 9.1E-104 | – | |
| SMART | 3 | 177 | 175 | 4.5E-22 | – | |
| CDD | 3 | 176 | 174 | 1.40937E-113 | – | |
| Pfam | 4 | 177 | 174 | 1.4E-69 | ||
| ProSiteProfiles | 10 | 177 | 168 | 21.926 | – | |
| SUPERFAMILY | 13 | 179 | 167 | 1.65E-50 | ||
| TIGRFAM | 15 | 150 | 136 | 2.7E-19 | ||
| SMART | 17 | 180 | 164 | 0.0043 | – | |
| Gene3D | 17 | 177 | 161 | 2.1E-59 | – | |
| PRINTS | 18 | 41 | 24 | 1.2E-16 | ||
| PRINTS | 46 | 70 | 25 | 1.2E-16 | ||
| PRINTS | 73 | 98 | 26 | 1.2E-16 | ||
| PRINTS | 151 | 175 | 25 | 1.2E-16 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi4g1v0117600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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