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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0127800 |
| Transcript ID | LotjaGi4g1v0127800.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Calcium-dependent kinase; TAIR: AT2G17890.1 calcium-dependent protein kinase 16; Swiss-Prot: sp|Q7XJR9|CDPKG_ARATH Calcium-dependent protein kinase 16; TrEMBL-Plants: tr|Q5D875|Q5D875_MEDTR Calcium-dependent kinase; Found in the gene: LotjaGi4g1v0127800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:18618545..18621972) extracted from Lotus japonicus Gifu genome v1.2.
AGGGTCAATATTCAATAACGACTCGTGGGTTTGTGTTTGGGGCTGTTCTTTTTTCTTGTACCAGAACTTACTTCATCTTT CTTTGCTTTGAGCAGGAAGAACAGCCGTTACACTGAAAAAGATGCAGCTGTAGTTGTAAGGCAGATGCTCAAGGTTGCAG CTGAGTGCCATTTACGTGGTTTAGTGCACCGAGACATGAAACCGGAGGTATGGTCAAGCTCACTGATATATCTGGCAAAT TTGTGTAAAATGGGAAATGTGGTAGTGTACTAGATGCTGTTTGATAAATCAATTTTATTTTTCTTTGCATGCAGAATTTT CTTTTCAAATCAACCAGAGAAGATTCACCTTTAAAGGCTACAGATTTTGGTTTGTCAGATTTCATAAAGCCAGGTAAGGA AATATCTTTATTTCCATGATCAATTTGCTTTGTTTTTCCACCTTCCCTCTTTTGTACCAGGAATGTTCTCCTTTTTGATT GATTGAGGTATCAGACATGCTGCAATCTATGTGTGAGAATTCTAGTTTTCTATATTTGAATAAAAGAAAAAACACTGCAG GAAAGAAGTTCCATGATATTGTTGGCAGTGCTTACTATGTTGCACCTGAAGTATTAAAGCGGAAATCAGGCCCTCAATCT GATGTGTGGAGTATCGGTGTTATTACATACATCTTGCTATGTGGGAGACGCCCATTTTGGGATAAGACTGAGGATGGTAT CTTCAAGGAGGTATAATACGTTATCATTGTAATTTTCTGATTATCCAATTTACGTGGGATTCCTCATTTATTCTTGTTTC TTAGTGACATAATAAGTTCTGGTATCTACTTTCATTGTGTACTGATTTTGAGTTCTGACAACAGAATTTGCTTTACTTTT TTGTTGTTATGTTTAATTGATAACCTGATATATGCAGGTCTTACGTAACAAGCCTGATTTCCGCCGGAAACCGTGGCCGA CTATAAGTAATGCTGCAAAGGATTTTGTCAAGAAATTGCTAATAAAGGATCCTAGGGCAAGATTAACTGCTGCTCAAGCT CTATGTATGTATCCCTTTGTTTTCTTACAATGAGAAGGTTGTTTATTAGTTGAGCATTTAAGTGATCCCTGTCTGATGAG AGCAGCAGAAGTCTTAATCACTAGAGGTTTTTGTCACTGCATCATATGTAGAGTGTGCTCTGTTTACACTTGTAGGGTTG AACTGAATAAAGTCAAAATGTGTTTCAGACTCTCAGTTTAAACTATAAATTTATCGTTAATAGATCTTTTGAATTACTTT AGTGGAAATGTATAAAGTTTTAATGATACCAAGTATTATATTTATGCGCACCTAATTACCCTCATTTTATACTTACTACA ATTTTTAAAAAAAAAGTGTAACTATGTTTTTTCGTAGCGATCGATTTGTCTTTATATCATTGCTAAATTATTTTCTTTAG ATTCCTGCTTGATTTCTGTATTATTTAATTAAAACTTATTTTGAGTGCTAGAGTGTATTGCTTTATTAAATTAGGAGAGA GGGATGAGGAAAAGTAAGTAAAGGACAAAAGGTAAATAACATTCCGATTGCCTATTTAAGTGCACATAAACCATTTTTGA GAGAAAGGTTACCAGACAGCTCTGAAAACTAAGGTGGCCAAACTACTCTTTGAAAACTACTTCTCAATTAACATTATATC TAAAATGAGGTAAGTGTGCTTTGTTAATCATTTTAAAAGTAGTAAGAGTTGTAAAGATTCTTAATAATAGCTAGAAGTTT AGAACCTCTAACTGCTTTCTGTAAGAACAGCCATGCTTGACTTGCTGAATCACTGGTGCCCTATTTCATAGGATTTTATT GGCAGTTCAGATTCAGTAAACATGGTGAATGGTGTTTCTGTACAGTGGTAATGCTATACAAACGAACACTTCACGTTACA CAAAATCTCAACTATTTTTGTGCCACTAATCACACCTAACTCTAATGCACAGCAATGCAATCAAACTGCAACATATCTTT TGTTGTTCAAGTAGCATTATCTTTTCATATAATTTGCTTAGTGAAACTGTAATTCTTATCCTCTGCTTCACAAAATATTT TGTAAGAAAAGCTTTCAGTAATGTGTAACGGTTTCCATTAATCCTGATATTTCCAGCACATCCATGGGTTAGAGAAGGTG GAGAAGCATCGGAGATTCCTATTGATATATCTGTCCTGAACAACCTGCGGCAGTTTGTGACGTATAGTCGATTCAAACAA TTTGCACTAAGGGTGAGACATTTATTGTTGCCTTTGCATGTCAGATGGCATAGGATTTGTTTGATGTTAAGCTTTGTTGA TATTTGATTACCCTGCAGGCATTGGCTAGCATACTTAATGAAGAAGAGTTGGCTGATCTAAAAGATCAATTTGATGCAAT AGATGTGGACAAAAATGGCTCGATTAGCCTGGAAGAGATGAGACAGGTAAGCGTATTCATTTACCGGTATTGTAGCTAAC TGTAATCTAAATATGCCACTTTCATGAATAAATGATTCCCTTAAATATAGTTTCTCCACTTAAGTATAAAAGGTAAGATT TTGTGCAGGCTCTTGCTAAAGATCTTTCTTGGAAGTTGAAAGAATCACGTGTACTAGAGATATTGCAAGCAGTGAGTATG TTTTGATTTTTGTAGGCATCATACATAGTTTTATTGCTACTTATCAGCGCTTGTTCTCTTTCTAAATTGTGAAAGTTTCT TTGGTGATGAATGATATTACTTCCACACCTATGACAATATATGTTGCTTCCCCAACTCCCCTAGTTAACGTTATACATCA TGGTTGTTTTGTCCTGTTTGCGTTAAACACTCTAACATCTGCACATTGCCTTCTGGCTTTGGAAAATAAGTATAACTTAG TCTTTTGTGCTTGCAGATTGACAGCAACACAGATGGGCTGGTGGATTTCACTGAGTTTGTTGCAGCTACATTACATGTGC ATCAATTGGAGGAGCATGACTCTGATAAGTGGCAGCTACGGTCACAAGCTGCTTTTGAGAAATTTGACTTGGATAAAGAT GGCTATATTACTCCAGAAGAACTTCGAATGGTTGGTCTCATGTCTTTTTCCCCCAAAACATTTTTCATGTAAAATGTGTA CCCTTAATAAAACAATTCAATTTTAGGTGGCAAGGATGTTAGTGCCTTGCTAGAAAATCTGCTTCTCATTTTGAACTGTA AAAGTTTCAAAAAAATTGGCATACATATCTGCTGCAAACCTACAACTAAGATTCTGTTTATCTTTTCAGCATACTGGCTT GAGAGGATCGATTGACCCTCTGCTTGAGGAAGCTGACATCGACAAAGATGGAAAAATCAGCCTATCGGAGTTTCGTAGAC TTCTAAGAACTGCAAGCATGGGTTCTCAAACTGTGACAACCCCAACTGGCTATCAGCGGAGGAGCTAG
CDS sequence (LotjaGi4g1v0127800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTCAAGGTTGCAGCTGAGTGCCATTTACGTGGTTTAGTGCACCGAGACATGAAACCGGAGAATTTTCTTTTCAAATC AACCAGAGAAGATTCACCTTTAAAGGCTACAGATTTTGGTTTGTCAGATTTCATAAAGCCAGGAAAGAAGTTCCATGATA TTGTTGGCAGTGCTTACTATGTTGCACCTGAAGTATTAAAGCGGAAATCAGGCCCTCAATCTGATGTGTGGAGTATCGGT GTTATTACATACATCTTGCTATGTGGGAGACGCCCATTTTGGGATAAGACTGAGGATGGTATCTTCAAGGAGGTCTTACG TAACAAGCCTGATTTCCGCCGGAAACCGTGGCCGACTATAAGTAATGCTGCAAAGGATTTTGTCAAGAAATTGCTAATAA AGGATCCTAGGGCAAGATTAACTGCTGCTCAAGCTCTATCACATCCATGGGTTAGAGAAGGTGGAGAAGCATCGGAGATT CCTATTGATATATCTGTCCTGAACAACCTGCGGCAGTTTGTGACGTATAGTCGATTCAAACAATTTGCACTAAGGGCATT GGCTAGCATACTTAATGAAGAAGAGTTGGCTGATCTAAAAGATCAATTTGATGCAATAGATGTGGACAAAAATGGCTCGA TTAGCCTGGAAGAGATGAGACAGGCTCTTGCTAAAGATCTTTCTTGGAAGTTGAAAGAATCACGTGTACTAGAGATATTG CAAGCAATTGACAGCAACACAGATGGGCTGGTGGATTTCACTGAGTTTGTTGCAGCTACATTACATGTGCATCAATTGGA GGAGCATGACTCTGATAAGTGGCAGCTACGGTCACAAGCTGCTTTTGAGAAATTTGACTTGGATAAAGATGGCTATATTA CTCCAGAAGAACTTCGAATGCATACTGGCTTGAGAGGATCGATTGACCCTCTGCTTGAGGAAGCTGACATCGACAAAGAT GGAAAAATCAGCCTATCGGAGTTTCGTAGACTTCTAAGAACTGCAAGCATGGGTTCTCAAACTGTGACAACCCCAACTGG CTATCAGCGGAGGAGCTAG
Protein sequence (LotjaGi4g1v0127800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLKVAAECHLRGLVHRDMKPENFLFKSTREDSPLKATDFGLSDFIKPGKKFHDIVGSAYYVAPEVLKRKSGPQSDVWSIG VITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPTISNAAKDFVKKLLIKDPRARLTAAQALSHPWVREGGEASEI PIDISVLNNLRQFVTYSRFKQFALRALASILNEEELADLKDQFDAIDVDKNGSISLEEMRQALAKDLSWKLKESRVLEIL QAIDSNTDGLVDFTEFVAATLHVHQLEEHDSDKWQLRSQAAFEKFDLDKDGYITPEELRMHTGLRGSIDPLLEEADIDKD GKISLSEFRRLLRTASMGSQTVTTPTGYQRRS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 156 | 156 | 9.3E-104 | – | |
| SMART | 1 | 151 | 151 | 2.3E-11 | ||
| ProSiteProfiles | 1 | 151 | 151 | 30.874 | ||
| PANTHER | 1 | 344 | 344 | 9.4E-220 | – | |
| PANTHER | 1 | 344 | 344 | 9.4E-220 | – | |
| Pfam | 6 | 151 | 146 | 2.5E-40 | ||
| SUPERFAMILY | 7 | 173 | 167 | 4.78E-45 | ||
| ProSitePatterns | 13 | 25 | 13 | - | ||
| Gene3D | 157 | 330 | 174 | 9.3E-104 | – | |
| SUPERFAMILY | 183 | 334 | 152 | 8.13E-34 | ||
| ProSiteProfiles | 194 | 229 | 36 | 13.314 | ||
| Pfam | 198 | 260 | 63 | 5.9E-10 | ||
| SMART | 198 | 226 | 29 | 0.0016 | ||
| ProSitePatterns | 207 | 219 | 13 | - | ||
| ProSiteProfiles | 231 | 266 | 36 | 9.855 | ||
| SMART | 235 | 263 | 29 | 4.0 | ||
| ProSitePatterns | 244 | 256 | 13 | - | ||
| ProSiteProfiles | 273 | 308 | 36 | 11.138 | ||
| SMART | 277 | 305 | 29 | 0.35 | ||
| Pfam | 280 | 332 | 53 | 9.6E-11 | ||
| ProSitePatterns | 286 | 298 | 13 | - | ||
| SMART | 307 | 335 | 29 | 0.0098 | ||
| ProSiteProfiles | 311 | 338 | 28 | 9.911 | ||
| ProSitePatterns | 316 | 328 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi4g1v0127800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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