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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0127800 |
| Transcript ID | LotjaGi4g1v0127800.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | protein kinase family protein; TAIR: AT5G66210.1 calcium-dependent protein kinase 28; Swiss-Prot: sp|Q9FKW4|CDPKS_ARATH Calcium-dependent protein kinase 28; TrEMBL-Plants: tr|Q5D875|Q5D875_MEDTR Calcium-dependent kinase; Found in the gene: LotjaGi4g1v0127800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:18618545..18622440) extracted from Lotus japonicus Gifu genome v1.2.
ATGTGTTCCTAAATCAATCCCTTGAATGTACTGGCAGATGGTTCTCCCTGCTGCTGTTGAGGATGTTAAGCAAGAGGTCA ATATATTGAAAGCAGTTGCCGGTCACGAGAATGTGGTTCAGTTCTATAATGCTTTTGATGATGATTCATACGTTTACATA GTTATGGAGTAAGTTGGTTTGTTTTTTCATTGTGCTGTTTTCCATGCCCCTCTGGTCTTGAGCACTACTTTGCTGAAGTG TGCTCTGGATTTATATATTGGGAGCTCAACTATTGAATCATTGTGTCTTGCTCACTCTATGTGTTTGTTTGTATGCTCAT GTTTACTTTCTTAGGTTATGCGAGGGTGGAGAACTGCTGGATCGGATATTGGCCAAGTAAGTTTTGCTTGATTTTGGATG TGATTGCTATTTTTCTTCAGTTAGTTATCACTTAAGAGTTTAGAATGTGTTATAAAATTGCAGAAACCAGGGTCAATATT CAATAACGACTCGTGGGTTTGTGTTTGGGGCTGTTCTTTTTTCTTGTACCAGAACTTACTTCATCTTTCTTTGCTTTGAG CAGGAAGAACAGCCGTTACACTGAAAAAGATGCAGCTGTAGTTGTAAGGCAGATGCTCAAGGTTGCAGCTGAGTGCCATT TACGTGGTTTAGTGCACCGAGACATGAAACCGGAGGTATGGTCAAGCTCACTGATATATCTGGCAAATTTGTGTAAAATG GGAAATGTGGTAGTGTACTAGATGCTGTTTGATAAATCAATTTTATTTTTCTTTGCATGCAGAATTTTCTTTTCAAATCA ACCAGAGAAGATTCACCTTTAAAGGCTACAGATTTTGGTTTGTCAGATTTCATAAAGCCAGGTAAGGAAATATCTTTATT TCCATGATCAATTTGCTTTGTTTTTCCACCTTCCCTCTTTTGTACCAGGAATGTTCTCCTTTTTGATTGATTGAGGTATC AGACATGCTGCAATCTATGTGTGAGAATTCTAGTTTTCTATATTTGAATAAAAGAAAAAACACTGCAGGAAAGAAGTTCC ATGATATTGTTGGCAGTGCTTACTATGTTGCACCTGAAGTATTAAAGCGGAAATCAGGCCCTCAATCTGATGTGTGGAGT ATCGGTGTTATTACATACATCTTGCTATGTGGGAGACGCCCATTTTGGGATAAGACTGAGGATGGTATCTTCAAGGAGGT ATAATACGTTATCATTGTAATTTTCTGATTATCCAATTTACGTGGGATTCCTCATTTATTCTTGTTTCTTAGTGACATAA TAAGTTCTGGTATCTACTTTCATTGTGTACTGATTTTGAGTTCTGACAACAGAATTTGCTTTACTTTTTTGTTGTTATGT TTAATTGATAACCTGATATATGCAGGTCTTACGTAACAAGCCTGATTTCCGCCGGAAACCGTGGCCGACTATAAGTAATG CTGCAAAGGATTTTGTCAAGAAATTGCTAATAAAGGATCCTAGGGCAAGATTAACTGCTGCTCAAGCTCTATGTATGTAT CCCTTTGTTTTCTTACAATGAGAAGGTTGTTTATTAGTTGAGCATTTAAGTGATCCCTGTCTGATGAGAGCAGCAGAAGT CTTAATCACTAGAGGTTTTTGTCACTGCATCATATGTAGAGTGTGCTCTGTTTACACTTGTAGGGTTGAACTGAATAAAG TCAAAATGTGTTTCAGACTCTCAGTTTAAACTATAAATTTATCGTTAATAGATCTTTTGAATTACTTTAGTGGAAATGTA TAAAGTTTTAATGATACCAAGTATTATATTTATGCGCACCTAATTACCCTCATTTTATACTTACTACAATTTTTAAAAAA AAAGTGTAACTATGTTTTTTCGTAGCGATCGATTTGTCTTTATATCATTGCTAAATTATTTTCTTTAGATTCCTGCTTGA TTTCTGTATTATTTAATTAAAACTTATTTTGAGTGCTAGAGTGTATTGCTTTATTAAATTAGGAGAGAGGGATGAGGAAA AGTAAGTAAAGGACAAAAGGTAAATAACATTCCGATTGCCTATTTAAGTGCACATAAACCATTTTTGAGAGAAAGGTTAC CAGACAGCTCTGAAAACTAAGGTGGCCAAACTACTCTTTGAAAACTACTTCTCAATTAACATTATATCTAAAATGAGGTA AGTGTGCTTTGTTAATCATTTTAAAAGTAGTAAGAGTTGTAAAGATTCTTAATAATAGCTAGAAGTTTAGAACCTCTAAC TGCTTTCTGTAAGAACAGCCATGCTTGACTTGCTGAATCACTGGTGCCCTATTTCATAGGATTTTATTGGCAGTTCAGAT TCAGTAAACATGGTGAATGGTGTTTCTGTACAGTGGTAATGCTATACAAACGAACACTTCACGTTACACAAAATCTCAAC TATTTTTGTGCCACTAATCACACCTAACTCTAATGCACAGCAATGCAATCAAACTGCAACATATCTTTTGTTGTTCAAGT AGCATTATCTTTTCATATAATTTGCTTAGTGAAACTGTAATTCTTATCCTCTGCTTCACAAAATATTTTGTAAGAAAAGC TTTCAGTAATGTGTAACGGTTTCCATTAATCCTGATATTTCCAGCACATCCATGGGTTAGAGAAGGTGGAGAAGCATCGG AGATTCCTATTGATATATCTGTCCTGAACAACCTGCGGCAGTTTGTGACGTATAGTCGATTCAAACAATTTGCACTAAGG GTGAGACATTTATTGTTGCCTTTGCATGTCAGATGGCATAGGATTTGTTTGATGTTAAGCTTTGTTGATATTTGATTACC CTGCAGGCATTGGCTAGCATACTTAATGAAGAAGAGTTGGCTGATCTAAAAGATCAATTTGATGCAATAGATGTGGACAA AAATGGCTCGATTAGCCTGGAAGAGATGAGACAGGTAAGCGTATTCATTTACCGGTATTGTAGCTAACTGTAATCTAAAT ATGCCACTTTCATGAATAAATGATTCCCTTAAATATAGTTTCTCCACTTAAGTATAAAAGGTAAGATTTTGTGCAGGCTC TTGCTAAAGATCTTTCTTGGAAGTTGAAAGAATCACGTGTACTAGAGATATTGCAAGCAGTGAGTATGTTTTGATTTTTG TAGGCATCATACATAGTTTTATTGCTACTTATCAGCGCTTGTTCTCTTTCTAAATTGTGAAAGTTTCTTTGGTGATGAAT GATATTACTTCCACACCTATGACAATATATGTTGCTTCCCCAACTCCCCTAGTTAACGTTATACATCATGGTTGTTTTGT CCTGTTTGCGTTAAACACTCTAACATCTGCACATTGCCTTCTGGCTTTGGAAAATAAGTATAACTTAGTCTTTTGTGCTT GCAGATTGACAGCAACACAGATGGGCTGGTGGATTTCACTGAGTTTGTTGCAGCTACATTACATGTGCATCAATTGGAGG AGCATGACTCTGATAAGTGGCAGCTACGGTCACAAGCTGCTTTTGAGAAATTTGACTTGGATAAAGATGGCTATATTACT CCAGAAGAACTTCGAATGGTTGGTCTCATGTCTTTTTCCCCCAAAACATTTTTCATGTAAAATGTGTACCCTTAATAAAA CAATTCAATTTTAGGTGGCAAGGATGTTAGTGCCTTGCTAGAAAATCTGCTTCTCATTTTGAACTGTAAAAGTTTCAAAA AAATTGGCATACATATCTGCTGCAAACCTACAACTAAGATTCTGTTTATCTTTTCAGCATACTGGCTTGAGAGGATCGAT TGACCCTCTGCTTGAGGAAGCTGACATCGACAAAGATGGAAAAATCAGCCTATCGGAGTTTCGTAGACTTCTAAGAACTG CAAGCATGGGTTCTCAAACTGTGACAACCCCAACTGGCTATCAGCGGAGGAGCTAG
CDS sequence (LotjaGi4g1v0127800.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTACTGGCAGATGGTTCTCCCTGCTGCTGTTGAGGATGTTAAGCAAGAGGTCAATATATTGAAAGCAGTTGCCGGTCA CGAGAATGTGGTTCAGTTCTATAATGCTTTTGATGATGATTCATACGTTTACATAGTTATGGAGTTATGCGAGGGTGGAG AACTGCTGGATCGGATATTGGCCAAGAAGAACAGCCGTTACACTGAAAAAGATGCAGCTGTAGTTGTAAGGCAGATGCTC AAGGTTGCAGCTGAGTGCCATTTACGTGGTTTAGTGCACCGAGACATGAAACCGGAGAATTTTCTTTTCAAATCAACCAG AGAAGATTCACCTTTAAAGGCTACAGATTTTGGTTTGTCAGATTTCATAAAGCCAGGAAAGAAGTTCCATGATATTGTTG GCAGTGCTTACTATGTTGCACCTGAAGTATTAAAGCGGAAATCAGGCCCTCAATCTGATGTGTGGAGTATCGGTGTTATT ACATACATCTTGCTATGTGGGAGACGCCCATTTTGGGATAAGACTGAGGATGGTATCTTCAAGGAGGTCTTACGTAACAA GCCTGATTTCCGCCGGAAACCGTGGCCGACTATAAGTAATGCTGCAAAGGATTTTGTCAAGAAATTGCTAATAAAGGATC CTAGGGCAAGATTAACTGCTGCTCAAGCTCTATCACATCCATGGGTTAGAGAAGGTGGAGAAGCATCGGAGATTCCTATT GATATATCTGTCCTGAACAACCTGCGGCAGTTTGTGACGTATAGTCGATTCAAACAATTTGCACTAAGGGCATTGGCTAG CATACTTAATGAAGAAGAGTTGGCTGATCTAAAAGATCAATTTGATGCAATAGATGTGGACAAAAATGGCTCGATTAGCC TGGAAGAGATGAGACAGGCTCTTGCTAAAGATCTTTCTTGGAAGTTGAAAGAATCACGTGTACTAGAGATATTGCAAGCA ATTGACAGCAACACAGATGGGCTGGTGGATTTCACTGAGTTTGTTGCAGCTACATTACATGTGCATCAATTGGAGGAGCA TGACTCTGATAAGTGGCAGCTACGGTCACAAGCTGCTTTTGAGAAATTTGACTTGGATAAAGATGGCTATATTACTCCAG AAGAACTTCGAATGCATACTGGCTTGAGAGGATCGATTGACCCTCTGCTTGAGGAAGCTGACATCGACAAAGATGGAAAA ATCAGCCTATCGGAGTTTCGTAGACTTCTAAGAACTGCAAGCATGGGTTCTCAAACTGTGACAACCCCAACTGGCTATCA GCGGAGGAGCTAG
Protein sequence (LotjaGi4g1v0127800.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MYWQMVLPAAVEDVKQEVNILKAVAGHENVVQFYNAFDDDSYVYIVMELCEGGELLDRILAKKNSRYTEKDAAVVVRQML KVAAECHLRGLVHRDMKPENFLFKSTREDSPLKATDFGLSDFIKPGKKFHDIVGSAYYVAPEVLKRKSGPQSDVWSIGVI TYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPTISNAAKDFVKKLLIKDPRARLTAAQALSHPWVREGGEASEIPI DISVLNNLRQFVTYSRFKQFALRALASILNEEELADLKDQFDAIDVDKNGSISLEEMRQALAKDLSWKLKESRVLEILQA IDSNTDGLVDFTEFVAATLHVHQLEEHDSDKWQLRSQAAFEKFDLDKDGYITPEELRMHTGLRGSIDPLLEEADIDKDGK ISLSEFRRLLRTASMGSQTVTTPTGYQRRS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SMART | 1 | 229 | 229 | 1.9E-62 | ||
| ProSiteProfiles | 1 | 229 | 229 | 41.587 | ||
| PANTHER | 4 | 422 | 419 | 4.7E-267 | – | |
| PANTHER | 4 | 422 | 419 | 4.7E-267 | – | |
| CDD | 4 | 228 | 225 | 2.61468E-111 | – | |
| Gene3D | 11 | 52 | 42 | 7.7E-132 | – | |
| Pfam | 12 | 229 | 218 | 7.4E-59 | ||
| SUPERFAMILY | 12 | 251 | 240 | 7.82E-67 | ||
| Gene3D | 53 | 234 | 182 | 7.7E-132 | – | |
| ProSitePatterns | 91 | 103 | 13 | - | ||
| Gene3D | 235 | 408 | 174 | 7.7E-132 | – | |
| SUPERFAMILY | 261 | 412 | 152 | 1.27E-33 | ||
| ProSiteProfiles | 272 | 307 | 36 | 13.314 | ||
| SMART | 276 | 304 | 29 | 0.0016 | ||
| Pfam | 276 | 338 | 63 | 8.1E-10 | ||
| ProSitePatterns | 285 | 297 | 13 | - | ||
| ProSiteProfiles | 309 | 344 | 36 | 9.855 | ||
| SMART | 313 | 341 | 29 | 4.0 | ||
| ProSitePatterns | 322 | 334 | 13 | - | ||
| ProSiteProfiles | 351 | 386 | 36 | 11.138 | ||
| SMART | 355 | 383 | 29 | 0.35 | ||
| Pfam | 358 | 410 | 53 | 1.3E-10 | ||
| ProSitePatterns | 364 | 376 | 13 | - | ||
| SMART | 385 | 413 | 29 | 0.0098 | ||
| ProSiteProfiles | 389 | 416 | 28 | 9.911 | ||
| ProSitePatterns | 394 | 406 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi4g1v0127800.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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