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Field | Value |
---|---|
Gene ID | LotjaGi4g1v0140600 |
Transcript ID | LotjaGi4g1v0140600.3 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Serine/threonine-protein phosphatase; TAIR: AT5G63870.1 serine/threonine phosphatase 7; Swiss-Prot: sp|Q9FN02|PPP7_ARATH Serine/threonine-protein phosphatase 7; TrEMBL-Plants: tr|A0A0L9TNT7|A0A0L9TNT7_PHAAN Serine/threonine-protein phosphatase; Found in the gene: LotjaGi4g1v0140600 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:21252235..21255596) extracted from Lotus japonicus Gifu genome v1.2.
ATGACACTTCATGCTGATTCAGCATCACCGGTTCCTCCACCGGATCCCGCCACCTCCAACGGCGCTGCAACGTCGGAGGA GGAAAACGCAGCACAACAGTCATCTCCTCCACCGTCATCATGTCCAATCCCGCCGGAGGAACTTCGACTTCCGATATGGT GGCCGGAAGACGGAAATCTAAGCATGGATTGGATCGAGAACCTGGTTGCGTGCTTCGATTGGTCTTCGAAGAATCTTCCT CCCTCCGAGTTCCCTTCGATTCTTCCCGTTCAAGTTTTCGACTCTCTCATCCTCTTAGCTTCCAAGATGCTTCACAAGGA GCCCAATTGCGTCCCTGTTGACCCGTATCGACCCGAACCCGGTTCCTCCGCCGCTTCCGTCGTGGTAGTCGGGGACGTCC ACGGGCAGTTCCATGATCTTCTCTTCCTCCTCCGAGACGCCGGTTATCCCTCACAGGATCGAATCTTTGTCTTCAATGGT GATTATGTTGATCGAGGGGCTTGGGGCCTCGAAACTTTCTTGCTCTTGTTGGCATGGAAGGTAAAGTTTCAATCTTTTCT GAATGTTTTTTTTGGGGGAAAAATTAGGTTTCAATTTTGCACCCTTGAATTTTGTGGTTTTTGTTGTGGCATTAATGTAC TATGTTCAAAAGGTCAATTTTGTACAGTTTGATTTGTTGATCGTGCTGTATTCCTTTTCAGTTTTCACCTGCTGTTGAAA TAGTCCTAATATTTTAGGGGGATATGAGTATTTCACTCTAATTAGATGGAATCTTGCTCTATACTTTATGCTAATTTGTC TATCTAGTGTGAATTAGCTAGGTTTGTTTAATTCTTTTCAAACAAAGATTTTAGCTCTTTTCACTAATAATTACAAAATG AATAATGTTTTGTTTACCATTCGTTTCCACCTCCGCCTCGAAGGAATAAGAGAAAAAAGAAAAAAGAGTGATATGATATG TGATGTGACAGGAAATGCAGAGAGAGATAGGAAGAAAAATGTGTGGAAAAGAGATGAGAGAGAAAGTGGAGTGTTAGTGA ATCACTCAATACTGATTTTACAATGTCCTCTGTAATTTTTTGAAATGCTGTTTGCTCAAGATAGGGTTATCCTCTTACAA TCATTGACAGATGAGGTAATTTTGAGTTCTATGTTATTTATAGTATTGTAATTATGTTGTATCAGGTGTTCATGCCACGT AACATATATTTGCTAAGGGGGAATCATGAATCGAAGTATTGCACGTCAGTTTATGGTTTTGAGAAAGAAGTAATGGTAAA ATATGGTGATAAAGGTAAGCATGCATACCGGAAATGTTTGATGTGCTTTGAAGGTCTTCCTTTGGCTTCTATTATAGCGG GGTGTGTGTACACGGCTCATGGAGGACTTTTCCGCAGTGTAACTGTGACGCCGTCAAAGAGATTAAAAGGAAAGAAGAAC CGTAAGATTAATGTAAATCATGATAGAAAAAATCTCTCTCTTGGTTCCTTGGAAGAATTGTCCAAGTGTCGAAGATCAGT TCTTGATCCTCCTTGGGAAGGCTCAAACTTGATTCCAGGTGATGTTTTGTGGTCTGATCCATCAAAAACTCCCGGTCTTG CTCCAAACAAAGAAAGAGGCATTGGCTTGTTGTGGGGTCCTGATTGTACTGAAGAATTTTTGAAAAAGTACCAACTAAAG GTAATAAACAAGTTACTGTTAAATTAGTGTTGATGTGTCTAATAGCCTTATTGCATTATATTCAAGTCAACAAATTGGTT CTGCGAAGTTATTTATGGAATTTATATCACGGACATCTTTTTGAGAAAAGGGTTATCTAATGTGCGTTGATATTATGACT TATGAGAGCATGTATCCTCTTGTACAAGCTTGAGGTTTTGCTTGACTTACCATGATTATTTAATTGAAGTGATTAAAATT TAATTCTTATAATTTTAATGTCTTATCTGAATGATATGAGGCTATGGTAAAATGAAAGGAAAGCTAAACCGATTGGTTGG ATGTTGATAGCTACTGTTTTAGGACACTTGTAAAAAGAAGGGAGGGTTAAGCAGTATTACCAGAAAAGTAAATCATGCGC TTTTTAAATCAAGATATATTTATTTGAATGTACTTCATTTAATCTTTATTGATTCTGAATGCTATTGGAATTTGATAGAT ATTTACTGTTAATTGGTCCTATAAGTATCTAGACTAGACTCTTTAGTAAATGGCTTAGTTAATAGCTTTTAACTGACCTT TGGACTATGCTATAATTACTTGTCCCCCTAATTGCAAGATAGGACTTCTCTAGTCTAAGTTAACTTATAAAATACACAGA ACAATGACTCTTGAGTACCTAAAATATCTAGTACTCTCAATACAAATTTAAGACTCAGATAGAAAATCTTAATGAGCACA GAGAAGACTTCTTTATTCTCCCTAAATATTTCTCTGAATCAGTGTAAAATTGAGGACACATGTTATATAACCAAGTTCTG TGTGTTTTGTTGTTGGCTTATTGCTAAGTTCAGTTCATCATGGTGGTAACTTATCAGAGCTTTTGAAACAGTGAGACTGA TAGAAAGCTACTGTATCTGTGACTGATATGTATTACACACTTTGATCTGTATCTAACACTCCAACACCGTTGAACAGTAA TTTTTAATTAAATTATTAAAAAGTTCGCCCCAGTTGTACACTTTCTTAATATATAAACCCAAATCAAATATACTGAGGTA TACTTTTATATATGTTGATAATTTTGTACTTATATATTTTAGTTCTTTTGTTATTTACATATATTTGTTATTCATTTTTA GATTTTTATTGTGTCCCATGCCCGCAACTTTGCCTCACAGTTCAGAGCTTTGCTTTAATGTCTAACTAATCATGATTTAG CTTATTTATATGAACAATCAGGTGTACTTGTAACTCTGACAACTGTAATGGTTAATCAACTGCAAAATGTTTAATTGCTT TGAATAGCTTGCCTACCATTTGTCCCATGGCTATGCGTCGTATTCTGCATTTATTTGTTGCTCTTTTGTATTTGTATACA ATAGTTTCTTGTTTATCTTGGTAACTTTTGTCTAATGTTATTACTGATATATGGATTTTCACTTATCTTTTATCTCAGTT GATCATCAGGTCACATGAAGGTCCTGACGCCAGGGACAAAAGGGATGGCTTTGATGGAATGGCTGAAGGTTACACTATTG ATCATATTGTGGATTCTGGAAAGCTGGTCACCGTGTTTAGTGCTCCCGATTACCCACAATTTCAGGTTTCCTAATAATTC TCTTAGCTACACATATGACTTGCACTCCAATCTTTTAAATATGTGGTAGACAGTAGACTGGTAGGACATTATTTCTGGTT GA
CDS sequence (LotjaGi4g1v0140600.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACACTTCATGCTGATTCAGCATCACCGGTTCCTCCACCGGATCCCGCCACCTCCAACGGCGCTGCAACGTCGGAGGA GGAAAACGCAGCACAACAGTCATCTCCTCCACCGTCATCATGTCCAATCCCGCCGGAGGAACTTCGACTTCCGATATGGT GGCCGGAAGACGGAAATCTAAGCATGGATTGGATCGAGAACCTGGTTGCGTGCTTCGATTGGTCTTCGAAGAATCTTCCT CCCTCCGAGTTCCCTTCGATTCTTCCCGTTCAAGTTTTCGACTCTCTCATCCTCTTAGCTTCCAAGATGCTTCACAAGGA GCCCAATTGCGTCCCTGTTGACCCGTATCGACCCGAACCCGGTTCCTCCGCCGCTTCCGTCGTGGTAGTCGGGGACGTCC ACGGGCAGTTCCATGATCTTCTCTTCCTCCTCCGAGACGCCGGTTATCCCTCACAGGATCGAATCTTTGTCTTCAATGGT GATTATGTTGATCGAGGGGCTTGGGGCCTCGAAACTTTCTTGCTCTTGTTGGCATGGAAGGTGTTCATGCCACGTAACAT ATATTTGCTAAGGGGGAATCATGAATCGAAGTATTGCACGTCAGTTTATGGTTTTGAGAAAGAAGTAATGGTAAAATATG GTGATAAAGGTAAGCATGCATACCGGAAATGTTTGATGTGCTTTGAAGGTCTTCCTTTGGCTTCTATTATAGCGGGGTGT GTGTACACGGCTCATGGAGGACTTTTCCGCAGTGTAACTGTGACGCCGTCAAAGAGATTAAAAGGAAAGAAGAACCGTAA GATTAATGTAAATCATGATAGAAAAAATCTCTCTCTTGGTTCCTTGGAAGAATTGTCCAAGTGTCGAAGATCAGTTCTTG ATCCTCCTTGGGAAGGCTCAAACTTGATTCCAGGTGATGTTTTGTGGTCTGATCCATCAAAAACTCCCGGTCTTGCTCCA AACAAAGAAAGAGGCATTGGCTTGTTGTGGGGTCCTGATTGTACTGAAGAATTTTTGAAAAAGTACCAACTAAAGTTGAT CATCAGGTCACATGAAGGTCCTGACGCCAGGGACAAAAGGGATGGCTTTGATGGAATGGCTGAAGGTTACACTATTGATC ATATTGTGGATTCTGGAAAGCTGGTCACCGTGTTTAGTGCTCCCGATTACCCACAATTTCAGGTTTCCTAA
Protein sequence (LotjaGi4g1v0140600.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTLHADSASPVPPPDPATSNGAATSEEENAAQQSSPPPSSCPIPPEELRLPIWWPEDGNLSMDWIENLVACFDWSSKNLP PSEFPSILPVQVFDSLILLASKMLHKEPNCVPVDPYRPEPGSSAASVVVVGDVHGQFHDLLFLLRDAGYPSQDRIFVFNG DYVDRGAWGLETFLLLLAWKVFMPRNIYLLRGNHESKYCTSVYGFEKEVMVKYGDKGKHAYRKCLMCFEGLPLASIIAGC VYTAHGGLFRSVTVTPSKRLKGKKNRKINVNHDRKNLSLGSLEELSKCRRSVLDPPWEGSNLIPGDVLWSDPSKTPGLAP NKERGIGLLWGPDCTEEFLKKYQLKLIIRSHEGPDARDKRDGFDGMAEGYTIDHIVDSGKLVTVFSAPDYPQFQVS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
MobiDBLite | 1 | 42 | 42 | - | – | |
MobiDBLite | 18 | 36 | 19 | - | – | |
PANTHER | 33 | 394 | 362 | 3.4E-176 | – | |
PANTHER | 33 | 394 | 362 | 3.4E-176 | – | |
SUPERFAMILY | 84 | 392 | 309 | 1.28E-65 | – | |
Gene3D | 84 | 395 | 312 | 4.1E-85 | ||
SMART | 88 | 396 | 309 | 2.1E-47 | ||
Pfam | 126 | 354 | 229 | 3.8E-37 | ||
PRINTS | 126 | 153 | 28 | 7.9E-40 | ||
PRINTS | 156 | 183 | 28 | 7.9E-40 | ||
PRINTS | 189 | 213 | 25 | 7.9E-40 | ||
ProSitePatterns | 190 | 195 | 6 | - | ||
PRINTS | 226 | 252 | 27 | 7.9E-40 | ||
PRINTS | 286 | 313 | 28 | 7.9E-40 | ||
PRINTS | 380 | 396 | 17 | 7.9E-40 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi4g1v0140600.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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