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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0156500 |
| Transcript ID | LotjaGi4g1v0156500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Heme-binding protein, putative; TAIR: AT1G17100.1 SOUL heme-binding family protein; Swiss-Prot: sp|Q6NU05|HEBP1_XENLA Heme-binding protein 1; TrEMBL-Plants: tr|A0A072TS05|A0A072TS05_MEDTR SOUL heme-binding family protein; Found in the gene: LotjaGi4g1v0156500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:27226001..27234817) extracted from Lotus japonicus Gifu genome v1.2.
AAGCTGAAGATGGAAACGAAACTCTTGTGTTTTCTTTATTATTTGTACATGACCATATGTTGCTGCTGTGGCAAAATAGT GCACGCTATTGAATCCCCAAAATATACAGTGATATTTTCAGAATCAAATTTTCAGATCAGACTCTACGATGAATCTTTAT GGATGTCTGCTCCTGTTTCAGGAACTTCCTTCGAACAATCCACCAAAACCGGATTTCACAGGTTTTTTTATATTTCTTGT ATGATGTATGAGAACAGTACCTCTTCCTCAACTATAATGCTGAAAATCAAAATCTATCTACTTTTCCCCTCAACCATGCC ATGACTTGTCACTACTAATGCATTATTCCAAAATGGTATTGATTAAAGTATGAAGTTCAGAACTCAAATTAACTACTCCC TTTATTCCAAAATTGTTGTTATTTAAAATAATACACATAATTTAAGAGCTCATTTATTAAAACACTCATTTAAATTTGAA GTATATTGATTAAGTGATTGATGAAAATTATGATAAAATAAGAAGTGGTATGTGCTATGAATCACAGACACCTATAAGGC TATAACATACGGAGTGTCCCGGTGTCGGACACCGACACGACACCGGCACTCGTACGACACCTGTCCGACATGTGTCAGAC ACTTCTTTGCGGTGTCCGATTAAAAAAATATTTTTTTGCGGTTAGGACATTTGAGCCGACACCTCTTCTTGGCTGGACAC CTCTAGGAAACTTGTATTTTTAAAAAATCATATAATTTTTAAGAGGGAAGCATGAAAGAAAGTGTTAACTTATCACTTGA AGAATCAAAGTCAAAGACATTTTCAATGATGATAATCAATAAGGGAGTGAAAACCAGATAGATTAGCTCTTTTTATAAAC AAGTTACTCCTTTTACAAAGAAAACATCAAAACAATTTCCTAAGCTTTATGACAAGAGCTTCATAAAAATATATGAGGTG TGTCTATATATATGTGTGTGTGTGTGTGTGTCCCCGTGTCTTATTTTTTAGATTTTAGCCGTGTCCCGGTACTGGTGTCA TGTCGTGTCGTGTCCGAGTCCGTGCTTTATAGGGTATGAGATATATTATTAAATGAGAGTATATGTGTAAAAAGATATTA CAAATAGTCTTGAACTTCTAACACAACATTCATTTTAGAAAATATGTGAAAAAGTTAAAACAACACCCACTTTTATAATG AAAGAAGTAATGTAATGTCACAAAATGTGTGAGGTTCTATCAATTGATGCATTTCATTACATTTTAGGCTTAATTGCACT TTTGGTCCCCCAATTATGGCCTTCTTGCGAAAATCGTCCTCAAACTTAAAAATTAGCAAAAAACGTCCCTGAAGTTTACA CCCGGTTGCAAAATTGGTTTTCCGTCTAATTCCATCCAAAAACTAACGGAATATTCCTCAAAAAATTCATTAAAAAATTG AGTCTCTGAAACATTCATCATCTTCAGATTAAAAACCCAAAAATTCATCATCGTCATCCCATTTTTCCTTCATCTTCATC ATCTTAATTAACACCCTTTTCCTTTTCACCTTTCCACCATAACCTCTGCACTTCAACTGCAAGCCACCACCACCATACCA TGGATCACTCATCTCACTTCCCCAAATCACATCATCACCACCACTCGTTCGCGCTCTCCGATCTGAACCTCTACACACCG CCACGTTTTCCTGCAGTCGCTTCTCCTCAGATCTGCCCTTTCCCGATCTGAACCTCTCCTTGCTGGTTTTAGCTCCACCG TCGCTCACCCTTTCTCGATCTTCCCATCACCACCACTCGTTCATCACCTATCTCAGATCTAAACCTCTGCACACCACCAC GTTTTCGCGTAGCCGCTCTGTTCACCGCCATCACCATCATCCTCTAGTTTTATATCGTCTCTGACTCTGCTGGCGGAGGA GGAGGCAGTGGTTTTTAGGTAGTGGCTGTGGTGTTGGTGGTTGGGAGATAGGGAAATGTGTTAGTTACATTGTCTGAATG TTTTATCTCAAACCATGAAATGGGTCGTTGAGAGATTTGGATTTTGTACCTTCCATTTGATCACATTGTTCATCCACTGT AAATAATTAATTTTTTTTTCCTTCTGTTTGCTGGGTTTGTCACTGTGGGATGTGTATACTTTAGGAATTTCTTTTCAGGT TTGGACATATTGAGTGGAAGAAATTGTTATTGGTGAGATGGATCAGGCAAGAAGTGTAGGTAGTGGTGAGATGTTGGATC GTGTTGATGAAGGGGTGGGTGGGAAATTGATGTAGTAACTGGTCCTAGCTTGGGTGACAGAGTTGCAATTGTTATTGGTG TGATCTGGGTTCTTTTTCTTCAACCTCTCTCTCCAACAATGAACCCAGAAAAAAAAAAAGATTTCCAGTAAAAGGATAGA AAAATGATGAATTTTAAGTTTTTGATTTATTTTCTTATTTTTTATTAATTCTTATCCCATAATTCGTTAAATAGTGGATG AAATTGGACGGAAAACCAATTTTGCAACCGGGTGTAAACGTTAGGGATGATTTTTGCTAATTTTAAAGTTTGGGGACGAT TTTCGCAGGAAGGTCAAAGTTGGGGGACCAAAAGTGCAATTAAGCCTACATTTTAAATTCGTTGGGTTTTAGTAAAATGT GTAAAGTCGCTGTCATAGCTTTGAAATCCACTATTTTCCCTTTTTTTATTGAAAATTGTAAACTCCAAATGTAAGTCAGG GATCGGGGATGGTTGCTCATTTGGTGAGCTAAGATAAATGAAAGGTATTGAAGGGTTGGGTTAGGGTTAAAAATGTACTC ATCAAAAATCTATTTTTGAAACCAAACCTGTAGATAAAGTGTCCTGAGATTATTTTAGCTTATTAGAGGTTTTGGGTTGC CCACACCTCATAACTTTTGACTTTTTGACCTCAAAATGTGTGTGAAGGGACTTTGAGGGGAAAGATTACATAAAAACATA GGCTTTCTTTTACGATTGGAACATGGAATTCCTCATCCCACTTTCTAATTAATTAAGGAGCGGAGCCTAAGCATGGATTG AGTGTTAAACCCAAACGCACACACTATTTTGATTCAGTGCATGTTTGGCACTGAGTTTCACACACACTTCAATACAAGTT TCAGTCAACATACTCAGTGTGTGTTTGGATCAGCATTAGCAAAATTGGATCTGACTAAAATTAAATTTGGCTAGAATTGG ATCCGATAAACGTGAGTTTGAGTGACGTGATTTATGTTTGGATACATTATCAGAAATGTGATTCTTCTAAGAGAATTCCG TTTGGATAACTTTGATTAGAATTGACTTTGATTGTATAATGACCAAAATGGGTATGAATATTATAATGAATATATGAATT AATTTATTAATTTACTTTCATTAAATTAACAATAATAATATATAATATAATATTAGGATAATTGTTAATTTCATTTCACT AAATTAATGAATATTTAGTGTTAAAATTTCATTTCATTTAAACACCGTAGTGTTTAAAATTTTGTATTAATAAATTAATT TGAATCATATTTAATGAGAATATGAGAAAAAAAAATTCCTTGTACGGTTGGGCACTTGGGCCACTCAGCCCAATACCATT ATCTAATTTAACACTAACCCGAAGTTTGTCCCAAGAAAAAAAACAATAACCCTAGTTAGTGAAGCACGCACAAGTCAAGA AGAAGAGATATGCAGCCGCGAGAGAAAAAAGACATAGGATAGAAAGGAAAAGAAACAGAAGTGAGATGAGAAATAGGCTA TGTTTGGCATGTCATTTCAGCTAGCTTATAACTTATTTGACTAACTTAAAAGCTCTATAAAAGTGTTTGGTGAAGGAGCT TATTTCAGTAGCTTAAAGTTTTGTTATAAGCTATCTCAGGTAGCTTAAAGCTTAAAGCTTATAGCTTATTAAATATATTC TCATTTTTATCCATATTATTTTATTAAAATTCCAGATTTTTGGCCTATAGGTTTTTTTTTTTTTTTTTGATAAGCAAATG TTAGTGGTTAGTAAGTTAGAAATTCCCTTCAAAGTTCCCTTCCAGGATTCAAACCCTGGACCTTCCCCTCCCCACCCTTA TGTCCCCTAGCTCTTACCACTTGGCCTATAGGTTTTTTACTAAACCTATTTACTTATCAGTTATCACACTTGTCTCATAT GTAAATTGTTTCTACACACAAATAATTACTACTTTGGAATAAAATAAATAATTTTATATTACAATTTTTTTTTTCGTCAT CGGAAAACTTATATTAAAAATTATTATTTTTATTCTATTTAATTTAATAAAAATATAGAAAATTAAATAAGTAAAAATTA ATATTATATTTTTAAGATGATAAATAACTTGAGTAAAATTAAAATATTTAAAATAATTTTAATATTGATATCATATAGGT ATTAATGTGAAAATAAAGTAATGTTAAATATAAAAAAGAATTATACAAGTATGCATTTTTATGTCATTTTACAATTTCAG CTTGTTCAATAGCTAGTTTTACCAAACACTTTTGTTCAATTACGTAGCTTTTCAGCTTTCAGCTAGCTTATCAGCTTTAA GCTAGCTTTTCAGCTATCAGCTAGCTTTTCAGCTAGGCATGTCAAACATAGTCATAGTGAAGAACGAAGTCATGTAGCTT TTCTTTTCTCCAAGTCCCTTCTCTTCTAAAATCATCCCCACATGCCTGGATGAGAAGCAGAGTCCAAGGTGCAAGAAGAA AGGGGTATAAACAAAATAAAAAATCAGATGGAACCCAGATCTGGAGAGAATCGCGTCTCTGTGACGGAGAAGCAACCCAG AGCAACATTAATGAGATCCGCGTCTGATTGCTGAAATCGATTCCAAAATAGAGCACCCAAACATTAATTTTTGCTGAAGA TCCACGTTTGCTCATCCATACGTGATTTTAAAGGTGTGTGACACGCAACCAAACACAAACTCATGTGCTTTTTCTGCCAT ACGTTTGTGTGAGACCATTAGAACGTGATTTCAAACACACGCTTAATCTCTAAAACACAAAAATAGAAATAGCTAATGTT AAATATCTTAATATTTCAACCCCTAAAATGGTTGTTCATTTGTGGACAACTAATTTTCTTTATTTAATTGCATTCTTTTA TCCTTTTTATTTTAATTATTAGTGATTGTGGTCCTTCTAGTTTTTTCGAACTAATCAACTCTATATTTTAAATTAAGCAA GTTCGTCCTGTCTCTCAATTTTCATTTGCATATAAATCATTAATTGTCATTTTTTTTTCAAATAATTTAAGGTTTATGTT AAAATTTGATATATGATACAATTTTAAAAATATATTTTTGAAAATTTGTTAAATTTTGACGGATGTAATTTTTTTTTCGG CCAACAAATATTTAAGTAAAAAATCTTGTGAACAATTCTCTCAAGTGAGTCTTTAAAAAGTCCAAACCAAGTCAATAAAA GATCAACTAACAAAAGTAGCCTACTGCAACACCAAAAAAACTCTAATGCCACCTTACAGAAAGAAAAAGATCACCTTGAG GGATATGAGATTAGGGTTTAAAGAGGTACAAATTTGGGATTTTTTTTATGAATTGATTGAAATTTAATATTTTGATAAGT GAATATTGGTGGGAATAACGTCTGCAATGATTAAATTGATTCAATTTATGAAAGTATGCAAAGTAGAATAATAATGACTA AAGTGCAATTAAGCATTTGTTGGCTTCCAAAGATCATCATTAGCATATAATTCAATTTTCTATTTAACATGTTCCTTTCG TATAATCTTTGACCATGCGCCAGGTTGTACCAATATATCCATGGTGCCAATTTGAATTCTTCCAAACTTGCATTCACTAG TCCAGTCTTAACGAGGATTCCCTCACCATCCTCTCAGGATGGCTATACAGTGAGAATCTATGTATCGCCTCACTTTCAGG GGAAACCTCCACTGCCTAATCCTGAACTGAAGTTGCAGGTAGAGAAATGGAAAACTCAATGCTTAGCAGTGTTGAAGTTC AGTGGGTATGCGAAGGACAGTGACATTAGCAGAGAATTTGAAGCTCTTGCTAGCAGCCTAAACAAGCATTTCAATAGAAG TTCAGGGACAATACAAGATGCAAGCTCCTATACTATTGCTCAGTACAATGCTCCAATTCGTAATAGCGGGCGCTTAAATG AAGTGTGGCTAAAAGTGTCGGGACTCGAAAACTGTTGAGGGTTGTGTGCTTCCTCAGCAGTTTCTTATTTGTGTTGAAGT GTCTTGATTTAGTGTTTCATTAATCCGTGTGTTCTATGCATGCTGGGTGTAATCGTTGGTTTGAAGAAGTTCCTAATGTT GGAAGCAAAATGCTCTCTAATAAAGAACTTTCTGTACAAGTTGCATGGATGAATAAAATAAGTGGAGGCTATGGACATTG ATTTTGCTTGATAAAATTGATTCGGCTTAATTGCAACTTTTGTCCCTGACATTTACCAATTCCACGATTTTAGTCCCCCA CTTAATTTAATTACACGGATGGTCCCTGACTTTGCTGGTCGTCTGCAACGTTGATCCTGCCGTTTATTTGTTAACGGATG AGGCTTACGTGGATGTCCAATTGGAGAGAGAAAGAAGAACTGGAGAGAGAGGGAAGCATGTGAGTTGCATGTGAGTTGCA CGTGAGACCTGCAACAGTCATCTTCTACCCTATTCCTCCTTAAAAAACATAGCATCGTGAGGAAGATGTTTCGAAGCTTG AGATTGAGCGAAAAGGGAAGAGATAAAGAACGAACGAGTCCCTGGAGGCGAGGAAGAAGGTTGAATCAGTTGCTGGTCTC TTTCTCTCTCCAATTCGACTTCCATATCAGTCAAGTGACCATCCACGTAAACCTCCTCCATTAACAAATAAACGGTAGGA CCAATGTTGCATACGACCAGCAAAGTCAGGGACCATCCGTGTAATTAAATTAGGTGGGGGACTAAAATCGTGGAATTGGT AAACGTCAGAGATCAAAGTTGTAATTAAGCCAATTGATTCTAATAAAAGTGAGTTAAAAGAAAGTAATTTATGTTTATCA CACGATACAGAAGATTAGTATGGTAGAGCTAGTTTCAATTGGTTAATCAGGTTAGTTGCTTGTAACTTCCTTGCTCTTTC ATTCTGTTATTTTGTTATTCTTATTTTGGTTAGATAGCAGTTTATGCTAGTTAGGATCCAGTACATATAAATAAGTTTTA CTCTGAGTAAACTCAATTCATTTCAATTCAATAGATTTACATTCTTCTCATTCTTGTAAGATGGTATCACAGTTCTCATA GATCTCTGGTCCACCCACACTTCGGCATCCTTCTTCTTCATCATCATCTTTTCTTTTCTAAATGCCAACTTATCACATGG ATCAGCTCCCTCTGCTGACAATTCAGTTTTTCCTCTTCCTGCCTATTTCCTCAGTATTTGTGATCATAATTCTCCATCCA ATTCTGTTCGCATTATACCAACTCATTTTGGCTCACTTAATTCAGTATCTCCATCCAATTCTGAAATATTTCTTTACCAG CCATGCGTGTTTCTGCTCCTATTTCTGATGTTTCAACTCACAGGCTGCAAATAACAAGGGCTCATGTCCATCTACAAGAT TTTCACACTGGCTTACATGTTTCTTCTGCTACTAATCCTCTTTCAGGAACTACTCCAAATCCTGTCTCTAATTACTGTGA CTTTCTTCGTGACCTATTATTGTTTCTTTCTTCATTCCCAATAATATCCGAGATGAAAACACCGAACATTGAATAACAAT GCAGTAAACAAACTTAAGTCTAATAGTAAGCTAGTAGATTAAATACGTAAAATACTTTCTTACTCTTTTCCAAGTTGTTG TCTTAGAACACTATTATACAATCAGACATTAGAGGAGACCAAACTTAGATTACAGCGTTGATCCAAAGTTACTCTAAAGT CTAAATAAACAAAAATATTGAAATAATGAATTCAATCACATATTACGCAACCTAAACATTGTCCATAGACCTCAAATAAA AAATATAAACTTGATCAGGAAGAGGAAATTTCAGATAAATTTAATCACATTTGAATCTTTCTTTATTTACATTATTCTGT GGTTGCTAACATAAATTATTCCTTATTTTTATATATCACTCTCATTAAACCTAGAAGCCAAATTTTGCAATCAGCAGGTA TACTCTCAAATTCAAAAGCTACCTCACGTTCAAAGTGGCATGTGGATGAACATACTTGAGTTATGCAGCTCCAGAGAGAT GGATCCAGAGGCCTACATTTGTGGTCTGGTCTGCACAACATAGACTTTTCCATCCCTGATGACACCTTCAATGTCCTGAG GAGAGCCATACAACTCTTCAATTGCATTTCCTGCTCGGGCAATGCTTGACAAGATTGACTTGCGAAAACTACCATCAACA ATCAGCGGATCTGATGAGTAATCAAGTACAACTTTCTCCTCTTCATCCATAGGCACACTGTCCAGAAAACCAAAATCAGT TAACCAATGTCAGAAAGCGTGAAATAGAATTGCAAATTAACTGATTCAAAGTGCTCACAGAACAACTTAATATCTGAATG CACCCATTACAAACACACTAAGAAACTTTATACAGCAACTGACAACTGCTAGGATAAAAAAGATGACTTTGAGTTTTATC CCTCCCAAGACAAATTCACTGATATGATAAATGAAAAATTAGTTGTCAACTTTCATACTATTGATATCATATATCTTTAC ATAGATTTTGTTATATTATCATCTAAATATATTAATTTATTCATCTATTAAATTGAAATCAATGACGCCTATGTATAAAA TATATTTTTATTAATAA
CDS sequence (LotjaGi4g1v0156500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAACGAAACTCTTGTGTTTTCTTTATTATTTGTACATGACCATATGTTGCTGCTGTGGCAAAATAGTGCACGCTAT TGAATCCCCAAAATATACAGTGATATTTTCAGAATCAAATTTTCAGATCAGACTCTACGATGAATCTTTATGGATGTCTG CTCCTGTTTCAGGAACTTCCTTCGAACAATCCACCAAAACCGGATTTCACAGGTTGTACCAATATATCCATGGTGCCAAT TTGAATTCTTCCAAACTTGCATTCACTAGTCCAGTCTTAACGAGGATTCCCTCACCATCCTCTCAGGATGGCTATACAGT GAGAATCTATGTATCGCCTCACTTTCAGGGGAAACCTCCACTGCCTAATCCTGAACTGAAGTTGCAGGTAGAGAAATGGA AAACTCAATGCTTAGCAGTGTTGAAGTTCAGTGGGTATGCGAAGGACAGTGACATTAGCAGAGAATTTGAAGCTCTTGCT AGCAGCCTAAACAAGCATTTCAATAGAAGTTCAGGGACAATACAAGATGCAAGCTCCTATACTATTGCTCAGTACAATGC TCCAATTCGTAATAGCGGGCGCTTAAATGAAGTGTGGCTAAAAGTGTCGGGACTCGAAAACTGTTGA
Protein sequence (LotjaGi4g1v0156500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
METKLLCFLYYLYMTICCCCGKIVHAIESPKYTVIFSESNFQIRLYDESLWMSAPVSGTSFEQSTKTGFHRLYQYIHGAN LNSSKLAFTSPVLTRIPSPSSQDGYTVRIYVSPHFQGKPPLPNPELKLQVEKWKTQCLAVLKFSGYAKDSDISREFEALA SSLNKHFNRSSGTIQDASSYTIAQYNAPIRNSGRLNEVWLKVSGLENC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 4 | 4 | - | – | |
| SignalP_EUK | 1 | 26 | 26 | - | – | |
| Phobius | 1 | 26 | 26 | - | – | |
| Phobius | 5 | 20 | 16 | - | – | |
| PANTHER | 5 | 206 | 202 | 7.6E-90 | – | |
| TMHMM | 5 | 27 | 23 | - | – | |
| PANTHER | 5 | 206 | 202 | 7.6E-90 | ||
| SUPERFAMILY | 19 | 202 | 184 | 1.67E-42 | ||
| Phobius | 21 | 26 | 6 | - | – | |
| Gene3D | 26 | 206 | 181 | 5.4E-45 | ||
| Pfam | 27 | 200 | 174 | 8.9E-39 | ||
| Phobius | 27 | 208 | 182 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0156500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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