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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0159300 |
| Transcript ID | LotjaGi4g1v0159300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | GRAM domain protein/ABA-responsive-like protein; TAIR: AT2G22475.1 GRAM domain family protein; Swiss-Prot: sp|Q8S8F8|GEM_ARATH GLABRA2 expression modulator; TrEMBL-Plants: tr|A0A0B2QS05|A0A0B2QS05_GLYSO GLABRA2 expression modulator; Found in the gene: LotjaGi4g1v0159300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:28160803..28168705) extracted from Lotus japonicus Gifu genome v1.2.
ATCAGAGGTTCAAGTTCGCCCATCCATTGACTTCGCGCTAAAAAAAAGCGAACACATTGAACAAAATTGCAAAATCCCCT CTTCTTCCCAAATCAATTCTCCTCTTTCGAAATTCCAATTCCAAACGAAACCGAAACTACCAACGCCGTTCAGATACGCG CTTTCACGCGCCGCCGGATGGAACCGCCGAAGCCCGGAACGCAACACGAATCTCACGTTCCCATCGGAGACTCCGCCGCT GAAGCCGCAGCGAACGGATCGGGATCGGAATCGCAGGGCCCGAAAGAACGTAGCGCGCCGTCGCCCGGTAGCGCTAAGAA GTCGGTGCATTGGAGCCCCGATTTGGTCACGGAATCCACGTTCACAGCTTCCCCTGAAGCATCGCGTTCCAATTCATACT TTTCTTTTCCTTCTTCTTCTTCCTCTCAATCCCCATCCTCGTTCAATGTCATGGGTCAGTGTTCCACTATTGTGATTTTG TGCATTTATTATCATTTTGACGCATTTCCGTTGCATGTTTGTGGAATTGATTATTTTTCAATCGTTTTGCTTATGATCAT CATCAGAGACGGTGGTGACTGTTCGTAATGTGCTTGGAAGATGGGGTAGGAAGGTCGGAGACGCAAGTCGGAAGGCTGAG AGTCTCGCTGGAAACACATGGCAGCACTGTAAGATTTCTGTTTTGCTTTGTTTTTGTTTCCTTGTTTTTGTCATATTCGC ATGTTGTTGTCCAGCTTCCTAAATCTGAAGTAGGTTCACATTTAAACTCATGTTACAGCTGTGCAAATGCTAGTATGAAT TGGATTATATTATGCTTATGTATTTGTTAGAAATGTCCATTTGGGGTTGTGTGTTTAACATAAGGGCTAAGGCCCCCTCT GTTACTGGGGTCCCTTTAAAGAAGTGTTATTAGGCGCTTATGCGGGATAGAATAATTGCTGGTATAATGTGATCCATTCT TTATTTGCTAGTGTCTGCCTTGGAGGGTCAATCCTCTTTTCAGTTAGTTTGTCTCTAGGATGTTTCAACAATTGGTGATA TTTTTAGTGTTTTTTTTTATGGGTCTTTGTTTGGAGATTGGTATATCCTTAAATTATTAGTGCAAGGGAAATTATTCATT GATGAGGTATATTTGTAGAAATATGTTCTATATTGAGAAGTCACCCCTTAATTTTTAACTCCTATTGTCAAGAAGGGTGT ACCAAATTAGATGTGGTTTTCTGCTGTTGTATGACTCGTTTAACATTGTCCTGCGGTCCACATTATCATGTCAACAAGTG CTTGTATTCAGCAGTATTGTTTTGCTCTTTTGGTTTTAATAATCAACTTACTTGATGGATTTTCTTTGTACTGAAATGTT CTTGTTTTTTTACATCTTGTTTAAGTGAAAACAAGCCCTAGCTTTGCTGAAGCTGCTATGGGAAGAATTGCCCAGGGAAC CAAGGTACTGGCGGAAGGTGGATATGAGAAGATTTTCCTGAGTACATTTGAAACTGTTCCAGAGGAACGGCTTCAGAATT CTTATGCATGTTATCTATCCACATCAGCTGGTCCAGTGATGGGGGTTTTGTATGTATCCACGGCCAAGATTGCATATTCT AGTGACAATCCTATCTCCTATAAATCTGAAAACAAAACTGAATGGAGCTATTATAAGGTACATATTCCATACTCTAATTT GGGAAGGGAAAGCAATTGCATGACATGAACTCATGAAGTACTATTTTCCATTTCTTAAAAAAATAAACCTGTGTATGCTT TTATGTCTATGTACTTGTGTTGTTTGCTGTCAAATTCATCAGGCAGTAGTTCATGAAATTGTTATGATGGGAAGGGTCAT TTCGTCAAGGGTTACCTTCTTGTCAGTATGCATTGTAAAATTGAAACTTAAAGTATTGGGTTGATTGACAAAATTTAATT GTTTTAAACAGGGACATGGATATAATAATACAATGAGTAAAGTTTTGCTGTACTTAATTACCGAAGTACATGTAATTTGT TTTTTTTTTTTTTTTTATATTATTGGCATGTGCATTTTATCATGGTCCATAAAGGTTCTGTTTTTGCTTTGGGTCAACAG TGGTATTTTTCTTTTTAGTATAATTGGTGTCGTTTTTACATTTGAGCTTTGCATTTTATGTAAACCTGAGCCTATATTTT TTTTGGTTCTTTAGTATAGAATAATAGCCTGAATAATTTAAAACCTCAACTTTGCTTGTCTAAAACATGAAGCAGAGTTG AGTCTAACATTTTATTGTTTTAAATTATACATATGCACGCTAACAGGGGAAGGGGGTGTGATAGAGTGAGTTGAGCCTAA CCAGAACCTTCCAGGATAGGAACTAGTATTACTATTAATCAAAATAGGGAAATTCCCTTGATTTAGGAAGCAGAACTTTG AGGGTCTATCAAATCTCCCAATGCTCAAAGGCCCTATATTCTCTCAAATTACTAGACTCCTGTAGTCCTGTACCCTTCTC AGCCCCTCTTCCTATTTATGGTGAACCTGCCTTATTTATTCAAACTAATGCAACTAAATTAACCCAAGTAACTACCTACT TAACAATTATTCATAAAGAAGATGGTTATCTATCATAGAGAAAACAACTCAGCAGACAACTCTAGACATTTCAATTATTT GTAGTCTATCTATAAGAGCCTTGGTAGGAGACATACAATCTTAATCAGATACATAATCTTAGTTGATGAATTTTTCATTG ATATGTATTTTCTGCTCTTGCATTGGTCGTATGGGGTATTTCGTAAAAGAACTGTGCGATGGTATCCCTTTGCATATAGT TTGGGATTGGATTTGCTCCAGAAGGGAGCTTTTTATTTTTGTTGTAGTTGAGAATGGTACATCTTTGTTGTGTCTATGAT GTACTTCCTACAGGCTACTGGAATGCATACACCATCCTTAATGATTCGGCAAATCCCCACAAATCAGGAAATGCTGTTGT ATTTCATCAGCGTTGCTGGAATATGTGTAAATAGTGTATATAGCCATATTACATTAATTAATAGATTCATGTGATCTCAT TTATTAGGGTGACTGCAACGGGAGCACTTAGCTTGCACAAGTATAGTACTTGTGTAACCTTGGCACACACACTTTTTACC TGCTACAACAGGTATATTTTACAAATAAGTCCTAAATTTGTAATTTCAAAATACTATTACATTCTCTCAATTTAGGGCGG GAATGCTGGACGGATTATGGATGACGGTGGATTGCCCAAAAAAATGGAGGATATAGGTGGTTTGGTTGTGGGTGACAGGT ATGGAGGTGAGGTGGGGGCTACGCTGTTGGCGTTGGGGTGGGTACAGCCGCTGGAATTTTAGTTTGCTGTATGATATATA GTGTTTATAGAGCATGAGTAGGGAGATTACAATGGAGGTCCATGGTAGCTCTTAGGAAGGGGTGGGTTTCAGGTGCTGGA GCTTTTGTGGCTATGGTGGTTCGCCTTTGGGGGAGACGAAGTATTTGGCGTTGGGAGGAAGGAATAGTGTTTTGAAATTA CAAAATTAGAAGAACTTATTTTAATATATAATAATATAGTACAAACCTGTTGTATCAGGTAAAAATTGTTTGTGCATGGT TACAGAAGTACTATTCTCGTGCATGTTAAATGCTCCCAACCACAATTTTTATGTAATTATTCTTGTTCAATCTATATACT TTTGCTTTGTTGTGTAATGAAGATACACGGATTCACTTATACATCCTCTTTCTCTCTCTCTGATTGGTTCAGATATAAAA AGAGAGAAAGAAGAAGAAACAGAGAGAGAAGAGAGAAATCAAAGGAAGAAGACTAACATCATATCATTCATGCATCATAC CATCTACAGAGCCTTAGCTTGCTTATATAGACAAACAACCCTTAAGTCCCTAACCGACTCATTTACCCTATACATGTGCA TCAGATCTGTCCCCTCAAAATCTTCCTTGACCTCAAGGAAATACAGAAGAATCATAATTGGAAAATTTTCAGCAATTGTT ACAAGGTTTTTCTTTATTGAACCAGACCCACAGTAGGCCCTACGTTGTCGTTGTTCCGACACGTAACATGCTCTGCCGCT GTAAGAACGAAGTCTGGTGGCTTTGCCGGTGGTGGGCTGGCCATGACCGGCTTGCAAGAATCACTGGTCAAGTAGCACCG ATCATCGCCACAAAGGAACAATTCCAGCGGTTTTCGCAGTGGACGTTTGACCATGACAGGCTTGTAGGAATCACCGGCCA AGAAACATATGTCACTGCTTCAAAGAAACAAGTCCGGCGGTTTTCGTGGTGGCCTTCTTGCCTCGCTAAACCCTAAATCA CCAATTTGGGGCTGAACGACTCCATCAATTTGGGGAAAAACAAATCTGTCGAACCCTAAATATCGAATTAGGATCAGAAT CCTCGACTCGTTCAGGATCCCCATTGTGAACACAATGGTTTCGTGTGCTCCGCCTCCGCAGTGGCTGTCGTGGCTCGTTC CGCCTCGGCTGTGGCTTCCGCTGCCGCTCGTTCCCCTCGGCTGCGGCCTCCGCTGCACGTTCTGCATCTACAATCAAGTG AATCAACCCAAAGAAATGATGCAGCGTTTCTCTAAACCTTCCCTTGGTTTCTGAGAAATCTTCCATTTAGCTTTTCCTGG TTACCACAACACCTACATCGGTGCTCTGGTACCAATGGTAGGTTCAGAAATAGAAAGAGTTAAAGAAGAAGAGGAAACAG AGAGAGAAGAGAGAAACCAGAAGAAGATAACTAACATCAGACCATCTTCAGAGCCTTGTTTGCTTATATAGACAAACAAC CCGTAACCGACTCATTTACCCCATGCATGTGCATCTCTCTCTCTCCCCCATCTCAACATGGTATCTTGAGTCTTATGAGA TACTACTTCCATTCAATGTGCCATTAGTTTGCCTCACTTATATTCCCTAATCCTGTAAATTCCTCTCCACGTTGTTCTCC ATCATCAGTTGCAAGCAGAACCGCGATTACTCCTACATTACCTCCACACCTCTCTATCCGCCCCAGACAATGTCTATCCA AATCTGGCATTGTTAAGCCAGGCTGCATCTACTTTATTGCTTACTAACATGCAGCTCCTATTATTAAATAGAATATGGTC ATAGCTCAATGAAGAGCTGAAATGCAAGCAAAGTTTGATGAGCGCATCATACTCTGTCTTGGTCCCTCTACCTTCTAAAA GGTTGTTGTAGGTTAAGAAATATCCAGATGGCTTTCTTGTAAGTAATTGGAGTATTTAGCAGTCGTAAGTCAACAATGCC TTCTATAGCAGCTTTTTTGAGGAGAAGGTTTACATGCTACAACCTCCAGAGTTTGAGAAATCCAACAAGGGAGTAGTTTG CAAATTGCATAAAAAACTATAGGCTAAAGAAGGCTCTCTGTGCCTAGTTTGAAAGGTTGTGTAAGATACCATGTTTGCAT TACCTTGTTCTCCATACTTCCATCCAGCATATGAAACTTGTCATCTTCTTTGTTCTTGAGAAGGGGTTCTTTAAAAGACC CTACCTGTTTCTCATGTTCCCATACATGACAAAGTTGCATATATTCTCACCAAGGCTCTCTCCAAGCTTAGATTTTGTCA TCCATACAAACTTAGGGTGTTCAACCAGTTTCATCCACTCTAAGTTTGCAGGGGTCATGTTGAGATATAATTGTGTAGCT CAGTAGACAGACTATTCCCAAAGTCAGTCTCAAATAACGTTAGCTTCTCTTGTATTGTTTGTAACTTCTATATGTTACTT GTTCAAAGTCTGTTAGAGTTAGTTGTTTGATAAGAGCATTAGGAGAACCATACCACAAAAGTTAGCTGTTGTAGTTGGAG AGCCCAAGGCCTTATAAACCCCACATTAGAATCTCATACTTCCAATATGGGACTCAAGTCCCTCACCTTGTAACTGGATC CTAAAATCCCACCATACTCCACAGCCTTGACGCCGACGTGGCTGGCAGTGCACTAGCCCTTTTGACTAGTCCTGGGTGAA CGCTGCAATGCCGGTGTCAGCACCCGCGCCGCTCGTTTGCAGCTGAGATACATTGTCTAAGGCTCGGATGCCAATTGATA AGAACGTTGGGAGAAGCATATCACAAAAGCTAGCTGTTATAGTTGGAGAGCCCAAAGCCTTATAAACCCCACATTAGAAT ACCATACTTCTAATGTGGGACTCAAGTGTGATACTTTGTAACTGGATCCTAACATCCCACCACACACCGCAGCCCCGACA CTCACGTGGGTTGGCTGTGCACTAACCCCTTTGACTAGTCCCAGCCCAGGTGTTATAGTTGGATAACCCAAGGCCTTATA AACCCCACATTAGAATCTCATACTTCAAGTGTGAGGGATCTTAGTAGCCTTCTTTGATATCACCCTTGTGGCTTTGTAAT AAAACTTGCCATGTACTCCCTCCGTTCCTATTTATAAGAACCAAATGAAGGGTGTAGCTTGGTCCTTTTTATAAGAACCA ATTCAAATTTCAAGATGCATTAATTATATTTTGGCAACAATACCCTCATTTAAGAGAGGTTTCTCTTTCTTTCCACTATG CAACTCATTAATGATAAATAGAAATTAAAAAAATAAGTTGGGGTAGTTTTGGAAAGTTGAGATAAATTTGAACAAATTTA ATACTACCAACCACTTTCTTAAGGGACGTGAAATGTTAGTTTGGTTCTTATAAATAGGAACGGAGGGAGTATTAGTTTGT ACCCCTGACTGGTTGTAGAATCCCTTAAAAAATCTTGCTCTATTCCCCGTAACCTTCCAACTTCCCGCACCACTCGTAAC CTTCTGCATTTCATGATACTAAGGATTTTCATCTGCCTAAACTCTTCTCTTTTCTGTTATTCCCTATTTGCAAAATAGTT ACTTAACACCATTTTTTTTCTTGTTCCTACTTTAGTGAATCTTTTATTCATATTTTTCTGTCTCTACTTTTATCCAGGTA TTGATCTTATAATGAACTTAAAGACATGTTGCATCAAACATACCTATTCCTCTTGTTTTAATTTGTCTGATCAAGAATAA TTTTGTATCAAGTATTATTTTTGTCAGCTGATATAACGTATTATGATGCATGAAGGTAGTCATTCCATTACATGAGCTAA AAGCAGTGAATCCTTCAGCGAACACAGCCAATCCTGCTGAAAAGTACATTCAGGTGATCTCGACCGACAATCATGAATTT TGGTTTATGGGTTTCTTGAACTATGAAGGTGCACAGGAATGCCTGGAAGAAGCTCTGAAAGCGGGCAAATTATCACTATC AGAAGCATAGTCTGTTTATACATTAGTTTCAAACCCCTATATGTGTCATGCCTTTTACGGAAGTTTAGTTTTGGTCATTA TGTTCTTGGAACTGTTTATAGAATGCCCCACTATTTTCGGCAATTTTTGTGGATATGAATTTGCCTTAGGTTTTACACGT TAGATCATTTTGAGGGGATGAAAGCGGGCAAATTTCTGTTTATACATTAGTTTCAAACCCCTATATGTATCCTCGCATTC AAGTAGAGTCACTTCGATAGCATTAGTGTAAAACCGCATCTGCTCTCCAGTCCTTAAAGTATCCAAAACAATGGTTTTTG CAAAACTTACAAGCTGTACTTTTTGTAAGCCGTTTTAGAGATCCTAGCTTTTAACAAAATATAAACATAGTGATACCAAT ATCCCTACTAATGATAGATACCGTATGCTTGCTAATAAGATGTCTATCTGATGTGGTTTAAGATAAGTATTTGAATTTTC CGATGTATAAAAAAAATAAGTATTTGACTTGTATTCTGATGTGGTTTGAGACATGAGTGAGACTATACATACATAATATT ATGGTCGTCCCCAATAGCATTCTGTTTTAATTCCGGATATTACTTGTTTCTCAAATTGTATAC
CDS sequence (LotjaGi4g1v0159300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAACCGCCGAAGCCCGGAACGCAACACGAATCTCACGTTCCCATCGGAGACTCCGCCGCTGAAGCCGCAGCGAACGG ATCGGGATCGGAATCGCAGGGCCCGAAAGAACGTAGCGCGCCGTCGCCCGGTAGCGCTAAGAAGTCGGTGCATTGGAGCC CCGATTTGGTCACGGAATCCACGTTCACAGCTTCCCCTGAAGCATCGCGTTCCAATTCATACTTTTCTTTTCCTTCTTCT TCTTCCTCTCAATCCCCATCCTCGTTCAATGTCATGGAGACGGTGGTGACTGTTCGTAATGTGCTTGGAAGATGGGGTAG GAAGGTCGGAGACGCAAGTCGGAAGGCTGAGAGTCTCGCTGGAAACACATGGCAGCACTTGAAAACAAGCCCTAGCTTTG CTGAAGCTGCTATGGGAAGAATTGCCCAGGGAACCAAGGTACTGGCGGAAGGTGGATATGAGAAGATTTTCCTGAGTACA TTTGAAACTGTTCCAGAGGAACGGCTTCAGAATTCTTATGCATGTTATCTATCCACATCAGCTGGTCCAGTGATGGGGGT TTTGTATGTATCCACGGCCAAGATTGCATATTCTAGTGACAATCCTATCTCCTATAAATCTGAAAACAAAACTGAATGGA GCTATTATAAGGTAGTCATTCCATTACATGAGCTAAAAGCAGTGAATCCTTCAGCGAACACAGCCAATCCTGCTGAAAAG TACATTCAGGTGATCTCGACCGACAATCATGAATTTTGGTTTATGGGTTTCTTGAACTATGAAGGTGCACAGGAATGCCT GGAAGAAGCTCTGAAAGCGGGCAAATTATCACTATCAGAAGCATAG
Protein sequence (LotjaGi4g1v0159300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEPPKPGTQHESHVPIGDSAAEAAANGSGSESQGPKERSAPSPGSAKKSVHWSPDLVTESTFTASPEASRSNSYFSFPSS SSSQSPSSFNVMETVVTVRNVLGRWGRKVGDASRKAESLAGNTWQHLKTSPSFAEAAMGRIAQGTKVLAEGGYEKIFLST FETVPEERLQNSYACYLSTSAGPVMGVLYVSTAKIAYSSDNPISYKSENKTEWSYYKVVIPLHELKAVNPSANTANPAEK YIQVISTDNHEFWFMGFLNYEGAQECLEEALKAGKLSLSEA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 89 | 89 | - | – | |
| MobiDBLite | 25 | 39 | 15 | - | – | |
| PANTHER | 40 | 273 | 234 | 3.7E-119 | – | |
| PANTHER | 40 | 273 | 234 | 3.7E-119 | ||
| MobiDBLite | 54 | 89 | 36 | - | – | |
| Gene3D | 152 | 272 | 121 | 2.8E-8 | ||
| SMART | 155 | 232 | 78 | 1.1E-19 | ||
| Pfam | 157 | 272 | 116 | 1.1E-24 | ||
| CDD | 166 | 271 | 106 | 1.52494E-60 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0159300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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