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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0161400 |
| Transcript ID | LotjaGi4g1v0161400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chaperone protein dnaJ, putative; TAIR: AT1G59725.1 DNAJ heat shock family protein; Swiss-Prot: sp|Q3MI00|DNJB1_BOVIN DnaJ homolog subfamily B member 1; TrEMBL-Plants: tr|V7C6U9|V7C6U9_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0161400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:29317228..29319277) extracted from Lotus japonicus Gifu genome v1.2.
AGTAATCATCTTCTTTTGTCTCTTGGGGATTTGGCTTTTTTTCTCTTTTGGCTATTTACTGTACATGTGCACTACATGAT GAGAAAGCTACCTTAGACCTTTTGTTCACTACTATAGAATAGGCCTTTTGCCACGCGTCTATTATTACCACAACATGGAA CCGTGGTTAAAGTGGGTATGTAGCACAAATATCACGGTTCTGTCTCCAATCGTGGCAATTGAAGAGTTCTAATACAACGG TTCACATTTAACCGTGGTAATAGATCTGAAACCCTATTCCGCAAAATATTCCTTCGAGCCACCCTCTCTTTAGCAATTTT GGGTGTTACCTGTTAGGGTTTTGCTTTCAAGCTCAACACCCAATCTAATATCTAAAAGATTGAAACACACGCCCACCTTA TCTCTCTCTCGAAGAACCGCGCTCACCCTCCAACGTGGCTCCGGCGAAGGTGCTCCCTGACGAACGTTGCTCAGGCGAAG GCGCTCTTCTATGTCTTGTTTGGTGTCTTTCTTGGTCTGTCGAGCCCCCAAATCGTTCGAGCCCTCAAATCTCAACTCTG ATCTCTCTGGTCCGTCGAGTCCCCTCCGTCCATCGAGCCTCTCCTCCTCCTCCGCGTGTGCTCTGCTTCTCCATAGAGCT CTCTTCCTTTCGAGCCTAGCAGGTTTAAAATGTTTGCCAAATATGTGGGCTACTAATGGTAGTGCTTCTCAAGGCCAAGG GAGATACTTCTTATTTTGAAAGGTTTTGTATAAGTTCATTGGCATCTGTTCCATAAAATTTGCTTCTATTGCTTCTACAA CTTAAAATGAAAGTTGGATTTTCCTCTAAAGCTTTTTGGTGAAGGTAGCTGACCCAGCCTAGTGGGAAAATGCTTGATTG GTAATGATAATTATGATGTTAATGGGCTGAATAAATTATATGGTTGAAAGAGAGCTAATAGAGATAGTGGTGGCTTCTAT TGCCACGGATTAAATACGTAACTGTGGCCATATATTGCCACGGTTGGGTAGTTGACCGTGGCAATATGTGGCCTCTATTG ACACGGTTATGTACGTAACCGTGGCAATAGAGGTTACCATTTACGACCCGCGGTTACAGGCAAAGCAATTGCCACGGGTC GCCCTTGAACCGTGACAATTGAGTAATTGCCACGCTCACTATCGCCACGGTTAAACCGTGGCGAATGGGCGGGCAGAGCC GTGGCAAAAGGCATTTTCTGTAGTTGTGGTTAATTGGTTTTTTTTGGGGATTTGGGGTGGTTGTTAATTTTTTATTTAAC AAAATCAAAGTAATCAAAGTAAAACTATGACTTTAAAGTTGTATAAAATATGCAAGTTTAATTGATTCGTTGAAGATCTC CAGTTTCAGGTTTCGTATGACAAAATTGCTTATCATTTCTATTTCCTCTCTTCTTTTTGGTTTTTATTGCAGTATGTGGA AGGAAGGTGAAGAAGAAATCTTTATTATAGATATTATGCCTGGTTCGAAGAAGGGATCAAAGATAACATTTCCCAAAAAT GCAAGCGAAACAACTCATGCTAGAGATACCATATTTGTATTGGATGAAAAGCCCCATGCTTTTTTCATGAGGGATGGAGA TGATTTGGTTTTGACCTATAAAATCTCTCTTGTAGAGTCTCTCACAGGAATGACCCTCCATGTACCAACATTAGATGGAA GAGATATGAAAATTGAGGTGCCAGATATTGTCACACCAGGTTATGTGGGGATGGTTCCAAACGAAGGAATGCCTATTAGA AGGGAAGCTGGGAAGAAAGGAAACCTGTATATGAAGTTTGATATAATGTTCCCATCAACCAGGCTTACGATGCAGCAGAA GTATGAGCTAAATAAGATACTGAATGGAACTTTTGATTAGTTAAATCTTTATGCCTTTCAGCTCTTTTTCTAGTTTATCT AAACTAATTATGTAGTTAATCATCATTGACATTTTAATTCATAGATATATGGATATGAATATGCTGAATCTGGCTACCCT ATGCTTTGCATTTTTGAACATAAATATGCAGCTCTTTATTTGAATATCTG
CDS sequence (LotjaGi4g1v0161400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTAGTGCTTCTCAAGGCCAAGGGAGATACTTCTTATTTTGAAAGTATGTGGAAGGAAGGTGAAGAAGAAATCTTTAT TATAGATATTATGCCTGGTTCGAAGAAGGGATCAAAGATAACATTTCCCAAAAATGCAAGCGAAACAACTCATGCTAGAG ATACCATATTTGTATTGGATGAAAAGCCCCATGCTTTTTTCATGAGGGATGGAGATGATTTGGTTTTGACCTATAAAATC TCTCTTGTAGAGTCTCTCACAGGAATGACCCTCCATGTACCAACATTAGATGGAAGAGATATGAAAATTGAGGTGCCAGA TATTGTCACACCAGGTTATGTGGGGATGGTTCCAAACGAAGGAATGCCTATTAGAAGGGAAGCTGGGAAGAAAGGAAACC TGTATATGAAGTTTGATATAATGTTCCCATCAACCAGGCTTACGATGCAGCAGAAGTATGAGCTAAATAAGATACTGAAT GGAACTTTTGATTAG
Protein sequence (LotjaGi4g1v0161400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVVLLKAKGDTSYFESMWKEGEEEIFIIDIMPGSKKGSKITFPKNASETTHARDTIFVLDEKPHAFFMRDGDDLVLTYKI SLVESLTGMTLHVPTLDGRDMKIEVPDIVTPGYVGMVPNEGMPIRREAGKKGNLYMKFDIMFPSTRLTMQQKYELNKILN GTFD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 5 | 62 | 58 | 3.9E-8 | – | |
| PANTHER | 21 | 161 | 141 | 1.1E-50 | – | |
| PANTHER | 21 | 161 | 141 | 1.1E-50 | – | |
| Pfam | 21 | 143 | 123 | 2.9E-30 | ||
| CDD | 22 | 144 | 123 | 1.90418E-30 | – | |
| Gene3D | 64 | 144 | 81 | 1.3E-26 | – | |
| SUPERFAMILY | 67 | 145 | 79 | 1.11E-20 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Protein folding | The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure. | ||
| Molecular function | Unfolded protein binding | Interacting selectively and non-covalently with an unfolded protein. |
Expression pattern of LotjaGi4g1v0161400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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