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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0167400 |
| Transcript ID | LotjaGi4g1v0167400.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ADP-ribosylation factor; TAIR: AT1G10630.1 ADP-ribosylation factor A1F; Swiss-Prot: sp|P51823|ARF2_ORYSJ ADP-ribosylation factor 2; TrEMBL-Plants: tr|A0A1D5T082|A0A1D5T082_WHEAT Uncharacterized protein; Found in the gene: LotjaGi4g1v0167400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:31886456..31891302) extracted from Lotus japonicus Gifu genome v1.2.
ATTTTACCATTCGTTTAAAACATTTTACTGCAGTATTTCTCCAAATAAATCGGGTACCACCGCTGTTTAGCATATAAAAC CCTTTCTCTCTCTGAATTCTTTCATTTCGCGTTGTAGGGAAGCAGCATTGTTCGCCTCTCTCTCTTTCTTCTCGTACCTC TCTCTACGCGTTCTGGTTCTAGATCCCTCAAGGTAATTTCTATTTCTGAGACCATTTTCTTTCCTGTTCCATCCACAAAC ACACCGATTCACCCTGGGCGATTCCATTTCATTTCGATTTTCCCTTCTCTTTTGCATGTTTCGCGTTCGAGATTTCGTTT TGCGTGACAGTTTTTTCAAAGCTCAATTTTTTTTTTTTCTGTTGAATTCGGGATGGGATTAGATTCTTTGTTGCATCGTT TGATTTGAGGGTTTTGGGATCCAGATGTATAGATCGTAACTTTTTGTTGTTCGATCCGTTTCGGTTCTCGTGTCGTGGTT ATGCGGTTTGATGAATCGAAATGGTTTTCGCTGTTTTTGTCGCTTGGCTTGAGATCTGTATTCATCTAGTGAAGTTAATT TTGTTGATGCATTTGATTACGCCTGATTTGGTTTGATGGAAGAATTTGATTACGTTTTATGTATTTTTGATTAATTTTGG GTTTTTTCTTTTAGCTGAATGAAATTATTTGGTTGATAATGTTGAATGGAATTTTGAGAATTTAGGGATCCACACCACAA GCTGAATTGTTTTATTTATTTTGGGTTTTTTCTTTTAGTTGAATGAAATTATTTGGTTGATAATTTTGAATGGAATTTTT GAGAATTTAGGGATCCACAAGCTGAAGGAGAAATGGGGCTGACATTCACCAAGCTTTTCAGTCGGCTTTTCGCCAAGAAG GAAATGCGAATTCTGATGGTTGGTCTTGATGCCGCTGGTAAGACCACCATCCTTTACAAGCTCAAGCTTGGAGAGATCGT TACCACAATTCCTACCATAGGTAAGTTTCTCGATTGTTCTATTTCTTATGAGTTATGCTTACAGTATGTTAGGCTCATGT GCTTGTGTTATTGTGTGTAACTGTGTATAATACTTCACCTCTAGGGATATTAATATGCATACACACCCATTATTGATCCT TTATGATAACTTCACTTATCTTAGCTAAATTACTGTATTTCGTTTTCAATAAGCTTTTAATATGAATCATACATTGATAA ATCTGTATAGAAGTCTAAACTTGAATCATACAATGATACAATGTGTGATGCTTCATATGAAATCCCTGATTAACCTTTTC CTACCTCGTGTTACTTTGGACCTACGTATTCTCCATGAATATTGTGACTGTTTATGCTGCTTCTATGTGTATGGATTTAT TTTTATTTTTCATATTACAGGGTTCAATGTGGAGACTGTGGAATACAAGAACATTAGCTTCACTGTTTGGGATGTTGGGG GTCAGGACAAGGTTTGAAGTTTGATCCTTATGCCTTTATGGTTCTGAGTTAAGTCTTGGAGTCAGTGGCTTAATACTTAT GCTTTGATTTGCAGATTCGTCCCTTGTGGAGGCACTACTTCCAGAACACACAGGGTCTTATATTCGTTGTAGACAGCAAT GACAGGGACCGAGTTGTTGAGGCCAGAGATGAGTTGCACAGGATGTTGAATGAGGTACCATAGTCAATTTGGTTAAGCTT TTAGGTCATCATATTTGATGTCTTTGTTCTCATGTGAGTTCATGTTAGATATTCATCTGACACTTTAGAGTGTAGATAGA AAGTTCTCACTATCATATTAAATCATTTGTTTTCTATTGTCTGTTAAAATGTGTATATATATATATATGTATATATATAT AACTAAATTGCTATAGTATTGGTTGCTTGCTCATAATACTCCTAGATAGTATTGTTTGGGATATATCTTTGATATGTTGG AATAAGTATAGTCTTGTTATTTACTGCGTTGTCAGAGGAATTGGAGTACGTACTCCTTTATTAATTTGTTGAAGAGAAAC AAAATGGATTCTAAAAGTGCAAAGGCTTTAGCTTATATAACAAAATGGATTCTAAAATTTTGACTAGGAAAGATAATGAG TATACTAAAGAAAAGACAGGGTTGTTGGATATTAGTTGAGTTTTACATGATCTATTTAATGATGGCTGTGTAATTATTGA ATTGGCCAAATCATCTATTGATGAACTAGACATAGAAGCTATACTTTTTTTCTAATGATGGGAATGGGAGGGATGAAAAA AATATAATTATGGCAGTAAATAGTGGGCTCGTTTGTTTCTGCTAAAAAATAAGTGATTTAAGAGTTGAATAGAAATTTGA TTTTATTTGAAGAGATTTTATTAAAAGCAGAAATTAAATTTTTGTTTACAAATATAAAAATTGCTTTTCACTTAGAAAAG TTACTAGAAATAATTGATTATTTTAAATCTACTAGAAATAACTTAAAGAAATAATCAGATTTCTGCTTAAGTGTATACAA ACAGTACTAACAGTTCAAAAAATGCATAAATTGATTTTTTTTTTAAATAAGTGACTATTTCACAAAAAAAAGCAGATACA AATGTGCCCAGTAATTTAATAGAGCAAGCAAGGGATTTTAAATAGGAATAATGGTGTTTTTCATGACATTCTGATATTGG TTGGAAAAATGTGTTATTTATATAACAGGTTTATGAAGTTTTTGTTGATTAGAGTGCAAACTTTGGTTGTTTTTCTATCA TTGAAGAGGACCACCTAGCAGAAAGCTTTTCTATTTACATTAAAAGCAAAGGATTTAGCGTATGTTTGGTTTCAATTCTT GCACTACTAGATGTGGATCAATCTTCCCAAAAGAAACTATTTATTGCTTCGAGTTGATGAGGATCCCTACTATGTGTGGA TCCACTTGTATTTTCCAAACTCACACTTAAATAGGAATGACATTGTTTTTCTTGACATTGATTGGAAAAATATGTAATTT AAATAATTTCTTTATGAAGTTTTCGTTGGTGAGTGCAAATTTTGTTTTTGATATTGTGCAATGGTGCTGGGTGATCCATG TAGTCAACCTTGCTTAGTGGGTAAGACTTGTTGTTTATGAGGCTGTGTTATCATATATTGAGTTTCAAAGGAGTTTTGAA GAATTCACCGTGTGTCCTATTAATCATTTCGTAGCTGAAGCAGTCAGCACTTTTGTAACTGCAATTGTTAATGATGATAT AGTAGTCTACCAACTGATGTTCAGTTGCTTAAAATGGGTGTTTTCCTATCAATGAAGAGGACCACCTAACATGAAGCTTT TCTAATTTCTATCTATGGTCACTTTGTTATTGGACCCATTTTTTTTCCTGGATTGTAATATCTGTAATGTTGTACTTGTC TACTTGATAATCATTTTGATGGTATATTTTGGAAGTTGGATACCAGTTCATTCTGGTCAAGCTCCTGGGAAGATAACAGC ACATTGATTGGCCTTTTGGCCAGAATCAATAGCATGTCTATACTGTTTCTTTCTGTTAATTATATTCTTGTGATAAATTT GGCATAATCCTGGAACTGTATATTTTAATTATCAGGATGAACTGAGAGATGCAGTACTACTTGTATTTGCTAACAAACAA GATCTTCCCAATGCAATGAATGCTGCTGAAATTACTGACAAACTAGGTCTCCACTCTCTCAGACAGCGTCACTGGTATAT ATTTTGATCACGTTGCCCTTTCTGTCCAGGATTGATAGTTCTCTCGTTGTGAGCTAACATGCTTTGTGGTTTTTTCAGGT ACATCCAGAGCACTTGTGCAACCTCTGGGGAGGGGCTTTATGAGGGTTTGGACTGGCTTTCCAACAATATAGCCAACAAG GTAGCTATTGATTTCCTGTCCAAATTTTGATTGAAATTGTATGTTACAAGTAACATGTTTAGTTCCTTGCAGTGGTAGTA AAATTGCACTATGCATTTTACAAACAGCTGCGCTTTTTTCTTTTTTCTGTTGGTTGAATTTTTTCTAATTATCATGGTGA CATTATTGAAGTTACTTGTTCATTGCCCTTTATGTCTTATCAATTATTAGCGTGATACGAGGGGCATAAGCTATCTCAAT TGGTACTGAAGTTATTTTTTCTGGAATGGTACTGAAATTGCTTTTATTGGTCATGATTATATATTACAGGCCTAATGCTT TTTGGAGTCTTGTGGATTGGTGATTCTGGATGCAGGGGTGAATATTATCTAGTTTGTTTTTTGGTCTTTTTCTGAGACAA ATTGGATTTCTGTCCATGTTTTGTGGCGTAGAACCTCTTGATGGCTGAAATTATAGCAGGAATTTGTTTCATGGGATGTC AGCTACTGTTTTTATTGGGTTTGGATTCAATGTTTATAACTGTATTAGATGCCAATTCAACGTACCATCTTATTGAGTTT ATTATTGAATGATACAAAAAAAGGAACTACTTTGTGTTATCTTCTATTTGCTTTGTATAAAATTGTCCTTATAATCATAA TTTGAGTTTTCATAATCTAGGTTTTCTCAAGTACTTTTATGTTTTACCAGCCATATTTCATTGTTCTTCGTGTTAGAAAA GAAATTGGAAAGCAATCTATATATATATATATATATATATATGTAAAGCTCACTTGAGCTATAAAGTATTAAATGCATTA AATAATGAAGTTGAACAAATTAAATTTCTATTACTTTCAATGTAATGTAACTTTTGAAACATGCCAATCTTTTTATTTTT TGGACTTTACACATGCCAATAGAATATAATTTTTGAAAAATGCACAAAACCTTGATGAATTATGAGAGATTTGGGTGCTA CATTATACCTTTTGTCATTTATCTTCATATCTTGCATGTAAAAGTAA
CDS sequence (LotjaGi4g1v0167400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGCTGACATTCACCAAGCTTTTCAGTCGGCTTTTCGCCAAGAAGGAAATGCGAATTCTGATGGTTGGTCTTGATGC CGCTGGTAAGACCACCATCCTTTACAAGCTCAAGCTTGGAGAGATCGTTACCACAATTCCTACCATAGGGTTCAATGTGG AGACTGTGGAATACAAGAACATTAGCTTCACTGTTTGGGATGTTGGGGGTCAGGACAAGATTCGTCCCTTGTGGAGGCAC TACTTCCAGAACACACAGGGTCTTATATTCGTTGTAGACAGCAATGACAGGGACCGAGTTGTTGAGGCCAGAGATGAGTT GCACAGGATGTTGAATGAGGATGAACTGAGAGATGCAGTACTACTTGTATTTGCTAACAAACAAGATCTTCCCAATGCAA TGAATGCTGCTGAAATTACTGACAAACTAGGTCTCCACTCTCTCAGACAGCGTCACTGGTACATCCAGAGCACTTGTGCA ACCTCTGGGGAGGGGCTTTATGAGGGTTTGGACTGGCTTTCCAACAATATAGCCAACAAGGCCTAA
Protein sequence (LotjaGi4g1v0167400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRH YFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCA TSGEGLYEGLDWLSNNIANKA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SMART | 1 | 181 | 181 | 3.3E-136 | – | |
| SMART | 1 | 177 | 177 | 1.6E-25 | – | |
| PANTHER | 1 | 180 | 180 | 3.8E-154 | – | |
| PANTHER | 1 | 180 | 180 | 3.8E-154 | – | |
| Pfam | 5 | 177 | 173 | 3.2E-80 | ||
| ProSiteProfiles | 11 | 177 | 167 | 25.659 | – | |
| SUPERFAMILY | 14 | 179 | 166 | 3.09E-58 | ||
| TIGRFAM | 16 | 157 | 142 | 2.1E-23 | ||
| SMART | 18 | 180 | 163 | 0.0041 | – | |
| CDD | 18 | 176 | 159 | 1.76619E-126 | – | |
| Gene3D | 18 | 177 | 160 | 2.5E-71 | – | |
| PRINTS | 19 | 42 | 24 | 1.3E-19 | ||
| PRINTS | 47 | 71 | 25 | 1.3E-19 | ||
| PRINTS | 74 | 99 | 26 | 1.3E-19 | ||
| PRINTS | 119 | 140 | 22 | 1.3E-19 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi4g1v0167400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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