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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0173500 |
| Transcript ID | LotjaGi4g1v0173500.6 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | WD repeat protein-like; TAIR: AT5G66240.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q58E77|WD82B_XENLA WD repeat-containing protein 82-B; TrEMBL-Plants: tr|K7M609|K7M609_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0173500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:34769788..34777380) extracted from Lotus japonicus Gifu genome v1.2.
GCGACGCAAGCGGAGAGAGAAGAGAAGGTCTCTTTGGAGCTGAGTGAAGAAATTCTTCAGAGTATGGAAGTAGGAATGGC CTTCAAAGACTACGTGAGCATGCCAACCATCTTGTTTTTTGTTGTTTTTTATCCACCAAAGAGGACATTAGGACTGTGTT TGATGTCAACATTGGATTTTGCAACCTGAAATTTAGTTCTTACTTCGTAGTCTAAGGAAAACAACTTAGTGGTTGTTCAC AGCTCATATTGTGCTTTACTCACCGCATTTCTTCCTTTTCTTTTTGTTGTTTTCACAGAATGGTAAAATTAGTTCGATGG ATTTTCACAGGGCATCCAATTATCTAGTGACTGCTAGTGATGATGAATCAATTCGTTTGTATGATGTTACTGGTGGAACG TAAGCCCCCATTTTATTTATTGGATTAATTTTGTAAACAATTTTCTTCAACATTTTTTATTCCCCATGAACTCTGTCAAA GTTGCTTTATTGTTATAATTCTGCTGTATTTTTCTCTCTTTTATTTTAACAAAAACAATGATGCCTCTACTATTATCTAC CGTATTAGACGATGACTTGATGTGGTGAATTCTAGTACCAAAATGGTGTTCCTTACATATATAACACGACCCCGATGTTA TTATTTACACAATTACAAAATGTCCCATCAGCAGCCATATGATGAATGGTGAATTAGATTGTTGTGTAAATAAACAAAAT TAAGAAAGTTATTATGTTATTGACCATGGTGTTAAATACTTTGAAATTAAATTATTTTTGAAGTTTAACTTTTCAATGTG TATGTCATCCATCTTGGCATTCTTTTTTCCCCTTCTAATTGATCTTTACTCATTCACCAACTTGAATTTCTAAATTTCTT TATTGTTACCAGATGCTTGAAGACAATTAACAGTAAGAAGTACGGGGTTGACCTGGTTTGCTTCACATCTCATCCTACAA CAGTCATTTACTCTTCTAAAAATGGCTGGGATGGTATGTTTCTTAACTGTTGTATCTTCAAAAATGTTTGTGTGCTCAGT ATATTTTTATATATTTCATTACTTATATGATCAATGAATCCAGAATCTTTGCGGCTTCTATCATTGCATGATAACAAGTA TTTAAGATATTTCAAAGGTCATCTTGACAGGTTTGGTATCAGCATTATGTATATTGCTCCAATCTCAAATCACATTCTAT TCTGTTCATGCAAATTCTATTTTGTAATATAATTAAGTACATATTTGGTTTGTGCTTTTTTCCTAGGGTTGTCTCGCTTA GCTTATGTTCCCGGAAAGACTGCTTTATATCTGGATCTCTAGATCGAACTGTTTTACTATGGGATCAGAGGGCTGAGAAG TGTCAGGTAGTGGCATTTGCGTACACTTTTTTTGTTTATTTATAAATAGGGACTTTTTAGGAGCTTCTTACTTTCTTTAA AATCTAAATAGGGACTTTTACATGTACAAGGAAGGCCCGCTATATCATATGATGATCAAGGGTTGGTCTTTGCAGTTGCC TTTGGAGGATGCATAAGAATGTTTGATCCTCGCATGTATGAAAAGGTTCGAATTCCATATGGAAATATGTAGAAAACTTA TTTTATTGGTTTGTTAATTTGTAATGTTAGTTGTGACTTGTGACATATGCTAATAATCTAATGTTGTGAAATTCACTCTG CAGGGTCCCTTTGAGACATTTTTTGTTGAGGGAGATATTTCGGATGCAAATGTTGTGAAGTTCAGTAATGACGGAAGACT CGTGCTTTTTACTACTGTGGATGGGCGCATTCATGTACTTGACTCATTTCGTGGCACACTTGTCTGTATCTTTCTCACCT AACTCAGTCCGGTTTTACTTCTTTCAGTTCATTTATTTCTGCTTTGAAAGCCTTTCTTTGTGACTGTTGTCTCTTTATCA TGTGTACACAGTTATCCACATATAATGTCACACCTGTCTCCTGCAACTCCACACTAGAAGCTTCTTTCAGCCCCGAGGGA ATGTTTGTAATATCAGGTAAGTAATTTTGGATCATCCAAAAGTTCTGATTAGTTTTCGAGAAAATGACAGTGTAGAGATT TTTTACACTGTCAACCAATTAAATTTCAAAGATGTGGTAAAATAAATTTTATTTAATTTAATTTATTGACGTGACACATC TTTGAAATCTGATTGGTGGACAGTGTAAATTCAATGCATCCAAATTAAACTCATATTATTCAGTATTCACTTGGTGACTC GTTTATATAATTTATGTTTTGCATTGAACTTTCTTTTTATTTTATTTTTTTTGGAGTGGATTTCATTTTAAACTTTGATT TTTATTTTTTTGGAAGTAAAAAGATTATATATCATCAGGAAAACCAGAGAAACCCAATCAAGGGAGAGGCAACCCGACAA AGAGCCCACCAAAAAAAGAGGGCCCAAAACCACCAACAGAAAACAAAGCCCACCAATCAAAGGCTCTCAATAGCTAGAAA AGCATCCACATCGCCACCACTATGAAGAGAACATCATCCTAAATTTTCCTCCAACCCGCGAATGGCTTCTAGGTTATTGT CACGGGATACAAGACCCAAGACTTTTCCGAGAAGCCACGACTTTTTAGCTAGTAAAATACTTGCAGCAGGAAACACACCT GAGGTTGAAGATCTAACACCTCTAACGAAATAGGAACGCCGTACGGATAATTCCCCCCCTCCGCCAAAGGCAAAGGCAAA GGCTCAACACCATCGGAGAAAACACTTTGGGGAACAAAAAGACTCCAAAAGAAGGAAGAGGGGTAGTTTTCAGAAGTCTA AAGATCTCTGAATCACAAACCAGAAATGTCTTCTGTCTACCCTAAAAAAACCAAAGATTACACAGGAAGCCCCAAAACCT CTGAGCTTCTCTCCACCACCGCCAAAGAACGGCAACCGATTGAATCAAGTCCTTCCTCTGCAAGGTTACCATCTGCAAGA CAATCTTCATACAAATGAACAGGATCTTTAAAACCCGAAAAGAAGATTTCTGGGAAGAGAGTCTCCACCGAACCCTTGGC TCCAGATCACATAAACAATTTTTAACCTCAATCAACCTCTCTTTGATCGGCAAAGATAAGGCCTCATGAGGGACTGACGG GTTCCAAACCATAACATCCCTCCAAGATGAAAGCAACGAACCAATGCCCTTTACTTGCCTTCCCTGAAACCTAGATCTCC CCCCGACCTCTTCCCCCAAAACCGAGAGCCAGCGATCAATCCGCAGGAGCCGTGTCGGGAGCGCCCGAGAAGGGGAATCT CACCCGCTTCACTGCCAAAGTAGCACCACCCACCTTTGAATCTGTCCAAAAACTTTACCGCCATCTCCACACAAGCCAGG GACACAAATCTGACTAACCCGAAACGCCACCGCTGTCCCTTCTTTGAGCGCTGGTCAAACACCTTCTTTGGCTTCCCATT TTGCAAAAACAGGTCCCTGATCTTGTTAAATCCCACTATTTCAGAGATGCAGTTGATGCAAGAGTGACACAATCTCGGGG AAAACCATCACCACTCCATCTAGAATCATCAGGACTGTCTTGATCAGCACCCTCTGCTTCATCTTCATCACTGTCACCTT TGGTGAGCACAGACCAAGAAGATGCAACACCAGAACCGCACCCAACTACAGTCGCCAGAGAACCTCGAGAGGAAGAAGCC CTAGCAGATCGATTCATAGCCATAGCCATAACCAGAGCAGCGCAAAACCCCCCCAAAAAGAAACCAAGAAGTGAGCGCAG CAAAGCCCTTGGTGCGAACCAGACGACTGACGCACAGATCAGAGTGCGATTAGGCCTTAAACCAGCGATCCAAGCCAAAG GCGACGCGGTGGCAAGGTGGCTAGCGCGATGTTGTAACAGTTCATAGAGGAACATGAAGATCTAGAAGAAGGGAGTGCGA AACAGGGAACGAACCAGCAATGATATGCAATTGAAGGACGGCGGTGGATTTCAAGAGAATGGCCGCAATCAGAATGTGGC CTGACAGCGGCGGCGGTTGGAAATGCTGGTTGGTGGTGTGGCGGCTCTGACCGAAAACCCTAACTTTCATCTTGCTTTGA CGAAAGTGATGCATGATTCATTTTCAACTTTAATTACCCTAGTATTTCTTTCATTTTGCTTATTGATGAAACCCTGATAT TATTCAACAGAAAAATGTACAAGAAACAGATGAGTATTCGAGAGACTCATCACTCTCCTAATTCCCAATTCCCAAATGAT CCCAAAGATACCTAAACCCTCTTCACACTCCCTTATTTATAGGCTAAGCCTTAACTAACTAACTAACTCTATATGCTAAC CCTTAACTAACTAACTAACTCCAAGTACTCATCAATACTCCCCCCTAAACATCCACCTTGTCCTCAAGGTGGGGTAAAAC ACAAGCTTCTTTAAACAAACAAAAAACAAATACTCCAACAGTTGGGCCTGGCCCATTAGAGTAAGGGAATGAACTGGTTT GTAGATGATTGAGAAAGAAAAGTTCCTCTTGGGCCCGTTCCTTCTGTTTAGCATTATGGGCTTTGGCCTTGTGGTCAAAC TTTGACCCAATTCTGAAAAATCTAGTTGAGCCAGCCTAGCTCTGCTTCGTGTGAACGCGTGTGCGTGTGAAGACAACGGA AAGACCACACCCAACCAGCGACGACGGAAACGAGCGTCCCCCGCCGTAACTGCAAAGTCAGGTGGCTTCGCCGGCGGCCG TGAAACGGTTACCGACTTGCGAATGAGCGAGCGCCCTTTACTCTCCTCCGTGCGAACTAACTCGAGGCCACAGTATCCCA CCACCGCTGTCTCAGCCAAATCCGGTGGCTTAGCTGGAGGACGGTTGGCCACCAAGTCCGATCTGCAAGAATCGCCAAGG ATGAAGCGTGAACTGCCACCACTGCGGTCTGGTGGCTTAGTCTCCAGTTGAATGGCAACCATCGAAGAGCAAAGAACAGA GGTGTGAATGAAGACCTCCGTCCAGCAAAAGAACGTGTCCGGCAGTTGATTGGCGGTTACCGCCGTGCAGAGACATGAAT CCGGCGGTTTCCGCGGTGGCCGTCTCTCCCAATTGAACCCTAAATCACTGATTTGGGGCAAAACGATTGGTTGCACCTTC TTCCTCCCATGAATGCTGCAAATCTGCAATTTCTCCATTGAAGAACCTTCATGTAACCGCTTGATTTTGATTTCCCCTTC GGCGTCGATCTTCTCCCCTTTCGCCGTCAACGTGCAATCGATGTAATCAACCACGGTGACCGGTTGACACCGTGACACCT CCGCTGTTTGCTCCGCCGCCATTGCAAACTCCGAGTCTTTCCGCGACGCTTCCATCTCAGAATTCTCTGGCGAATATGGC TTGATCTCTGATTTCGCCAACAGCACTGAATTGGCCTCAGGTTTGGCTTCCACCACAACAGTTCTTCGTTCTGCCTCCAA GACTTCTTGCTTCCTAGGGATTTCTTCCTCCTCTGAATCTTGGACTGGTTCTGGGATGTACGGTTCCAATTCTGGTTCGA ATTTCCTCAACAGAGCCTCCACAAATTCCCACCATGTTGCCTTCTGATTGCGTCTTCTCCAGCAAAACCACCACATGAAA GCTTCACCAGTCAAAGCCTTCTCTGCCCCTGAGAATTTCTCCTCTTCGGATACTCCCTTGGCCTCACAGTGTTGCTCCAC CATAATGAGCCATCCGTAGGCCTCTCTTCCATCAAATTCTGGAAACATCTTCACGAATTGATGGCAATCACAGCACCTAG ATCGGTGCTCTGATACCAATTGATGAAACCCTGATATTATTCAACAGAAAAATGTACAAGAAACAGATGAGTATTCGAGA GACTCATCACTCTCCTAATTCCCAATTCCCAAATGATCCCAAAGATACCTAAACCCTCTTCACACTCCCTTATTTATAGG CTAAGCCTTAACTGACTAACTAACTCTATATGCTATTGCTTTGGCAGAATGAATATGATAATTTTTCAAAACTCTTGCAT TTTCCATTGTTTTTTATCTCATTAATATTTAGTTCACTCTAGTCTCACGTATGTATGCAGTCTTGTTGGATGCTGTTAAC TGCTCTTGTGGGTTTTCATGTTAAATTTACAATTTTACACTTTGACATTTTGATAGGCTCAGGGGATGGCAGAATCTGTG CATGGAATGCTCGAAGTGGCAAAGAAGTATGATAAGCTACATTCTTTCTATTTCTACATTTCTTAACTATTATTTTTTGT TTCTAATCTTTTGCTTAGATATATAATAACTTTGAAATTTTCAAGAATGTTCTATCCTTTCATTGTAAAGATCATAAGTT GTGTTTCATTCCCTTAGAAAACTTAAAGATTGACCAATTTTTCATTGTAAATATCCTAAATTATATCTGATTGCAAACTG TGTAACTGACTGAAACCAGTATTGCCATATATTTCACTCTCATTAAGCCAACAGTGGTTGGACATGGTGGAAGTGAGCTG TGATTGCAGGCAAACTTTCCTAGTAATGTCAGGAGTTTAAGTTTTCGAGTCGTTACTCTGGAGGGTTTTACCTAACCATC ACTCCGGGCCCAAGGTTTAGTTTCACTTCCATCCATGGCACTGGTTAGACCAAAAGAAGAGTAATTTTCGCAACACTAAA CATATGTTATTATTGCAATTTATTCCCTCAAATGATTAATTTCCCCTTCTGAGCCTATAGTACATATTGAGGCATATCAT TTTATAGGATAGGAGCCAATTTTCATTGTTAATGCTTTTTCTGAAAATTGTTTCCTTTCTGTCTATATAAGTATAGCTCA ATCTGTTCAGTTACATGAGAAATAAAAAGATTGTTGAGAAATCCCATATTGACTAAAGATATGGCTATACGAGTCGTCAT AAAGGGTAGAGCAACTCTCACCCTTAAGCTAGCATTTGGGGTAGAGTTAGGCATAACCCGAATTGTAAGATGATATCAAA GCCTATCCTGGATCCGTTTATTGGGCTACCTGTAGATGTTCATTCCTGCAAATTCCACGCTCCAGATGTCCAGCTCTAAG CGTAAAGGTGTACATTTAAAAGTCCTACATTAACTAGAGATATAGCTAAATAGTCTTTATAAAGGGTATAGCAACCTTCA CCACTAAGCTATTTTTTGGGGTAGAGTTAGGTCTATCCGAAATTCTATTATGTTATGAAGCTATATTTCCTCGTTTTTCT TTTTGATATACTGAAGCATGTTAGAGATGCAAGGGTCAATACTCTTCTGCTCCATGTCTGTGTTGATGTTGACTCTGCCT AGCATAAAAGGACATTTGTTGTGCATACTGAAACAACTACTAGCGTTAGGTTTGACATCAAAGCTTCTCTGAGTAACAAT ATAGTTTTATTCTTTCTACTTTGTGGGATTTAGTATGAACATTACTTGCCGTTGTATGTTAATGCTTGATTTAACATGTC CAGGTTGCAACTTGGAGGAGTGCAACTTCTGATACTGGACCTCCTGTCATAAAGTGGGCTCCTGGGAATCTTATGTTTGC AACTGGATCTTCTGAGCTGTCATTTTGGATTCCAGATTTGTCTAAATTGGGAGCTTATGTTGGAAGGAAGTAG
CDS sequence (LotjaGi4g1v0173500.6) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGTAGGAATGGCCTTCAAAGACTACAATGGTAAAATTAGTTCGATGGATTTTCACAGGGCATCCAATTATCTAGT GACTGCTAGTGATGATGAATCAATTCGTTTGTATGATGTTACTGGTGGAACATGCTTGAAGACAATTAACAGTAAGAAGT ACGGGGTTGACCTGGTTTGCTTCACATCTCATCCTACAACAGTCATTTACTCTTCTAAAAATGGCTGGGATGAATCTTTG CGGCTTCTATCATTGCATGATAACAAGTATTTAAGATATTTCAAAGGTCATCTTGACAGGGTTGTCTCGCTTAGCTTATG TTCCCGGAAAGACTGCTTTATATCTGGATCTCTAGATCGAACTGTTTTACTATGGGATCAGAGGGCTGAGAAGTGTCAGG GACTTTTACATGTACAAGGAAGGCCCGCTATATCATATGATGATCAAGGGTTGGTCTTTGCAGTTGCCTTTGGAGGATGC ATAAGAATGTTTGATCCTCGCATGTATGAAAAGGGTCCCTTTGAGACATTTTTTGTTGAGGGAGATATTTCGGATGCAAA TGTTGTGAAGTTCAGTAATGACGGAAGACTCGTGCTTTTTACTACTGTGGATGGGCGCATTCATGTACTTGACTCATTTC GTGGCACACTTTTATCCACATATAATGTCACACCTGTCTCCTGCAACTCCACACTAGAAGCTTCTTTCAGCCCCGAGGGA ATGTTTGTAATATCAGGCTCAGGGGATGGCAGAATCTGTGCATGGAATGCTCGAAGTGGCAAAGAAGTTGCAACTTGGAG GAGTGCAACTTCTGATACTGGACCTCCTGTCATAAAGTGGGCTCCTGGGAATCTTATGTTTGCAACTGGATCTTCTGAGC TGTCATTTTGGATTCCAGATTTGTCTAAATTGGGAGCTTATGTTGGAAGGAAGTAG
Protein sequence (LotjaGi4g1v0173500.6) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEVGMAFKDYNGKISSMDFHRASNYLVTASDDESIRLYDVTGGTCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESL RLLSLHDNKYLRYFKGHLDRVVSLSLCSRKDCFISGSLDRTVLLWDQRAEKCQGLLHVQGRPAISYDDQGLVFAVAFGGC IRMFDPRMYEKGPFETFFVEGDISDANVVKFSNDGRLVLFTTVDGRIHVLDSFRGTLLSTYNVTPVSCNSTLEASFSPEG MFVISGSGDGRICAWNARSGKEVATWRSATSDTGPPVIKWAPGNLMFATGSSELSFWIPDLSKLGAYVGRK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 311 | 311 | 1.7E-187 | – | |
| PANTHER | 1 | 311 | 311 | 1.7E-187 | – | |
| Gene3D | 1 | 228 | 228 | 1.3E-35 | ||
| SMART | 3 | 39 | 37 | 0.17 | ||
| SUPERFAMILY | 6 | 292 | 287 | 1.06E-46 | ||
| ProSiteProfiles | 7 | 48 | 42 | 11.712 | ||
| ProSiteProfiles | 7 | 265 | 259 | 20.988 | ||
| Pfam | 14 | 39 | 26 | 0.018 | ||
| PRINTS | 26 | 40 | 15 | 2.4E-5 | ||
| SMART | 87 | 126 | 40 | 1.1E-5 | ||
| Pfam | 90 | 126 | 37 | 5.3E-4 | ||
| ProSiteProfiles | 94 | 126 | 33 | 11.444 | ||
| PRINTS | 113 | 127 | 15 | 2.4E-5 | ||
| SMART | 170 | 211 | 42 | 23.0 | ||
| SMART | 214 | 256 | 43 | 0.49 | ||
| Gene3D | 229 | 305 | 77 | 4.9E-8 | ||
| Pfam | 230 | 256 | 27 | 0.11 | ||
| ProSiteProfiles | 235 | 265 | 31 | 10.642 | ||
| ProSitePatterns | 243 | 257 | 15 | - | ||
| PRINTS | 243 | 257 | 15 | 2.4E-5 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi4g1v0173500.6, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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