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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0189500 |
| Transcript ID | LotjaGi4g1v0189500.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein kinase-like; TAIR: AT1G11390.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q02981|YP109_YEAST ABC1 family protein YPL109C, mitochondrial; TrEMBL-Plants: tr|V7BT81|V7BT81_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0189500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:43360347..43364092) extracted from Lotus japonicus Gifu genome v1.2.
GTTGTAGCTGACACAATTACTGATTTGCAGATTTTTGATGCTTAGAGATATAAAGAGAGCTGCTCAATCTGTTTGTAAAT TAAGTCGAGGAATTGGCCTGCAAAGAAATGGGCCAATTGGCTCAGTTGGATCGAATATCCACCAGCGCTGGGTGTACATG CAATATAAGTTTGCTAGTGAAGCACGTAGTTCATTATTGTGGCATGCAACAAGGGAAAACTTTAACAAATGCTGCTCTTT TAGAAGCTTTTCTGTAACTTCAGCTAGTAATGGAGTCACACGTCATTCTCAGATTGCTTGGAAAAGGCTATACAGAAAAT ATTGTTCCAGTGATGATGGTGCATTTCCTCCCACCATATATATGATTGCTCAGGCAGTGAGCTTGGCTTTGGCTCGTTCT TATTTGCTAGTACCTGGTATTTTTGCATTTACATGTGGAGAGCTTGCATTATCTCAGCGAAATTGGGCAGATGTAGAACG TTACCCTTCACAGAATGGTTTGTATATGCGCGCACAAGACGGGTATAATTACATGTTCACATTTACATTCATGATATTAG AAGTTCTTATCTTATTAGTGAGGGCTCTATATCTAGGAATACTATTCTCTCCGAGCATTGCGATGGCACCATTTGCAGAT TATTTCGGACCTAAGTTTAGGAAACTGTGGCTCATTGTTGTTCATCGCACACTAGAAAAATCTGGTCCTGCATTCATAAA ATGGGGTCAATGGGCAGCTACACGTCCTGATCTTTTTCCTCGAGATCTATGCACTAAGCTTTCAGAACTTCATATGAAAG CTCCTGAGCATAGTTTCAGCTACACAAAGAAAACTATAGAAAAAGCATTTGGTCGAAAAATTTCTGAAATTTTTGACAAT TTTGAAGAATTGCCTGTAGCATCTGGAAGCATCGCCCAAGTGCACCGCGCTTCATTAAAATATCGTTATCCTGGTCAGCA AGCAAAGCCATTCTTGGTTGCCGTAAAGGTTAGACATCCTGGTGTAGGAGACTCAATCAGAAGAGATTTTGCTATCATTA ACTTTGTGGCAAAAGTTTCGAAGTTCATTCCTGCTCTTAATTGGTTAAGATTAGATGAGAGTGTACAACAGTTTGCAGTT TTCATGATGTCCCAAGTTGACCTTGCTAGGGAAGCTGCCCACTTGAACCGCTTTATTTATAATTTCCGTAGATGGAAGGA TGTTTCTTTCCCTAAGCCTGTCTATCCGCTTGTGCACCCTGCTGTTTTGGTGGAAACATATGAAAATGGAGAAAGTGTTG CACATTATGTTGATGGTCTTCAAGGACATGAACATTTTAAATCTGCTCTTGCTCACATTGGGACTCATGCACTTTTGAAG ATGCTTCTGGTAAAATATACTTCACAATTGCAAAATTTTCTCCCATTGTTTTCTTGTGGTTAGGGATAGTATGATTTCAA TGTTCTTATTTAGAGTGTTCTTTATTTACTATGTGCATTAAGGGAAGAATATTACCGATGACCTCTATGTAGTTATAGAG TCAGAATATTTAACTCAAGTAATCAACAGAGTATGGAAGAAATTGTTTGCCCACATTGTGAAAATGACAAGCACAGTCCT AGGAAATTTAACTAGTGTGGACAGTAGGATAAATATTAGGAAATAGAGATTCTGCATATATACCTTCATGATAAGGGGGA TCCGTATAAGTTTTATTAAGAGAACTTGTTTATATAATAAGCACCTATAAATTGTAAGCATGGTGTAATATAACGTTTTC CTTTGAGTTTTTATTTCCCTTTTACTTTACTAGGTGAAAACCATAATCTTTGTGGAGCCTAATAAATGGCTTTTGTTGAC CCATGTTGCTGACTCCATCGCTCTGAGCCTCTGACTAGTATGATGAGTCTTGATTATTATTGTTCTATGAGAATCTAAAA TATGGTTTGACTACTTGATATTAGAACTTGAGGTTTAGGTTGGGTGGTGGGTACTGAGGACCATTAGCCCATTTCCTATC ATCTTAATTGCAAGTGTTTTATTGGAGGAGGGATTTGGGGTGAGGGAGATTTAACCAGGTGATTGAGTGCGTTAGAAGAA TGTGCTGGAGCATATTTGTAAACTAGTTTATATATTTTTTTCCTCTTACACTATCAGTTTTGATCTGTACAGTTGTTTTG TGAAAATTAATACATTGCAGTTGTTTTTATTTTTTGGGCCTTTGGCCACCAGTCTCCACGGGGGAAAGGTGCCCCACGTG ACTAATCTGGCTTGGGATACGGTAGTGATGTCCCTGGCCACAAAGGTATTATTTTTTACCTCAGAGGGGATCGAACCCGG GCCAGAAGCCTAGGCGAAATCCCTTAAGGAAATGCACATTCACCACCTGTGCCACCCCTTGTGGTTACATTGCAGTTGTT TATTGGGTTTGGATCCAGCTGGAATTTACGGACTAAAATTTAAGTTGTAATCTCTGATGAGAAAATTAATGGTGTGGGTT CTCAGTTTGAATTTTGAGGGTTTCTTTGTCGGAACTTGGAACTCATAAATTGTGAGCCTTAATTAGGTATCTAGCTGGTC TTGGATTATAAGTCATCATCAAAATCTTCTTCTTTTTATTTATTGGGTTTCTTTGTAGAGCGATAATCTATGGCTTTACT TATTTTATCTTACATATATTGAATTTTCTTTTATCCTATAATTGTTTTTTTTACTTGCTCTTGTTTGATCTGTTAATTAT CATATCCCATCCTAATCGTTAATATGAAGTAAAAGAAGCATCATTCCTATAATAGGTTTAAACTTGGAACATTCATGAAG TTTTAGACATTATAATGCCTCTTTCAGGTGGACAACTTCATTCATGCAGATATGCATCCTGGAAATATCCTTGTTCGACA GGGAAAGTCTCGCAAACGGCTCTTCAAATCAAAGCCTCATGTAATTTTCCTTGATGTAGGCATGACTGCTGAACTTTCTG GCAGTGATAGAGTAAATTTAGTTGAATTTTTCAAAGCTGTTGCCCGTCGTGATGGCCGAACTGCAGCAGAATGCGCACTC AGTTTATCAAAGCAACAGAACTGCCCAGATCCAAATGCTTTCATTGAGGTAAATTTTCCCCTAACTTTTATGTCATTCAA TCAAGTGAGGTTTATTTCATCTTGGAAAAACTATTGTGGTTTTGTTCCTATTATGGCTTTATTTTGTTATTGTCATTGTC AAATTATATGCCCATAAATACATCATATATAAACTGATGGGCAGATTTTATGACATTTGCAAGTAGTCTTGGGCCATTTT CACATTTTGTCTCATCTTTGTTTTCTAACAGGAAGTGGAAGAGGCGTTTACATTTTGGGGCACCCCGGAAGGTGACCTGG TTCATCCTGCAGAGTGTATGGAGCAATTACTTGAGAAAGTTAGGCGTCACAGAGTTAATGTTGATGGCAATGTTTGTACT GTCCTGGTGACGACCTTGGTTCTTGAGGTGATTATTTTTCTCCTGTGTACTATGTTTTACTAATATAACATGGGAGCATG TGATCATAAATACAAGAGTTTATTGCATGGCTGATTGTATTTTCCCCTATACAATTTCTATGTGCTGATGTGATTCATCT GATATTGGAATTTGTTTAATTTGTAGGGTTGGCAGCGAAAGCTTGATCCTGGGTACAATGTGATGCAGACTTTGCAGACA TTGTTACTTAGAGCTGATTGGGCAAAGTCTCTTTCTTACACAATTGACGGACTCATGGCCCCTTGA
CDS sequence (LotjaGi4g1v0189500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTTAGAGATATAAAGAGAGCTGCTCAATCTGTTTGTAAATTAAGTCGAGGAATTGGCCTGCAAAGAAATGGGCCAAT TGGCTCAGTTGGATCGAATATCCACCAGCGCTGGGTGTACATGCAATATAAGTTTGCTAGTGAAGCACGTAGTTCATTAT TGTGGCATGCAACAAGGGAAAACTTTAACAAATGCTGCTCTTTTAGAAGCTTTTCTGTAACTTCAGCTAGTAATGGAGTC ACACGTCATTCTCAGATTGCTTGGAAAAGGCTATACAGAAAATATTGTTCCAGTGATGATGGTGCATTTCCTCCCACCAT ATATATGATTGCTCAGGCAGTGAGCTTGGCTTTGGCTCGTTCTTATTTGCTAGTACCTGGTATTTTTGCATTTACATGTG GAGAGCTTGCATTATCTCAGCGAAATTGGGCAGATGTAGAACGTTACCCTTCACAGAATGGTTTGTATATGCGCGCACAA GACGGGTATAATTACATGTTCACATTTACATTCATGATATTAGAAGTTCTTATCTTATTAGTGAGGGCTCTATATCTAGG AATACTATTCTCTCCGAGCATTGCGATGGCACCATTTGCAGATTATTTCGGACCTAAGTTTAGGAAACTGTGGCTCATTG TTGTTCATCGCACACTAGAAAAATCTGGTCCTGCATTCATAAAATGGGGTCAATGGGCAGCTACACGTCCTGATCTTTTT CCTCGAGATCTATGCACTAAGCTTTCAGAACTTCATATGAAAGCTCCTGAGCATAGTTTCAGCTACACAAAGAAAACTAT AGAAAAAGCATTTGGTCGAAAAATTTCTGAAATTTTTGACAATTTTGAAGAATTGCCTGTAGCATCTGGAAGCATCGCCC AAGTGCACCGCGCTTCATTAAAATATCGTTATCCTGGTCAGCAAGCAAAGCCATTCTTGGTTGCCGTAAAGGTTAGACAT CCTGGTGTAGGAGACTCAATCAGAAGAGATTTTGCTATCATTAACTTTGTGGCAAAAGTTTCGAAGTTCATTCCTGCTCT TAATTGGTTAAGATTAGATGAGAGTGTACAACAGTTTGCAGTTTTCATGATGTCCCAAGTTGACCTTGCTAGGGAAGCTG CCCACTTGAACCGCTTTATTTATAATTTCCGTAGATGGAAGGATGTTTCTTTCCCTAAGCCTGTCTATCCGCTTGTGCAC CCTGCTGTTTTGGTGGAAACATATGAAAATGGAGAAAGTGTTGCACATTATGTTGATGGTCTTCAAGGACATGAACATTT TAAATCTGCTCTTGCTCACATTGGGACTCATGCACTTTTGAAGATGCTTCTGGTGGACAACTTCATTCATGCAGATATGC ATCCTGGAAATATCCTTGTTCGACAGGGAAAGTCTCGCAAACGGCTCTTCAAATCAAAGCCTCATGTAATTTTCCTTGAT GTAGGCATGACTGCTGAACTTTCTGGCAGTGATAGAGTAAATTTAGTTGAATTTTTCAAAGCTGTTGCCCGTCGTGATGG CCGAACTGCAGCAGAATGCGCACTCAGTTTATCAAAGCAACAGAACTGCCCAGATCCAAATGCTTTCATTGAGGAAGTGG AAGAGGCGTTTACATTTTGGGGCACCCCGGAAGGTGACCTGGTTCATCCTGCAGAGTGTATGGAGCAATTACTTGAGAAA GTTAGGCGTCACAGAGTTAATGTTGATGGCAATGTTTGTACTGTCCTGGTGACGACCTTGGTTCTTGAGGGTTGGCAGCG AAAGCTTGATCCTGGGTACAATGTGATGCAGACTTTGCAGACATTGTTACTTAGAGCTGATTGGGCAAAGTCTCTTTCTT ACACAATTGACGGACTCATGGCCCCTTGA
Protein sequence (LotjaGi4g1v0189500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLRDIKRAAQSVCKLSRGIGLQRNGPIGSVGSNIHQRWVYMQYKFASEARSSLLWHATRENFNKCCSFRSFSVTSASNGV TRHSQIAWKRLYRKYCSSDDGAFPPTIYMIAQAVSLALARSYLLVPGIFAFTCGELALSQRNWADVERYPSQNGLYMRAQ DGYNYMFTFTFMILEVLILLVRALYLGILFSPSIAMAPFADYFGPKFRKLWLIVVHRTLEKSGPAFIKWGQWAATRPDLF PRDLCTKLSELHMKAPEHSFSYTKKTIEKAFGRKISEIFDNFEELPVASGSIAQVHRASLKYRYPGQQAKPFLVAVKVRH PGVGDSIRRDFAIINFVAKVSKFIPALNWLRLDESVQQFAVFMMSQVDLAREAAHLNRFIYNFRRWKDVSFPKPVYPLVH PAVLVETYENGESVAHYVDGLQGHEHFKSALAHIGTHALLKMLLVDNFIHADMHPGNILVRQGKSRKRLFKSKPHVIFLD VGMTAELSGSDRVNLVEFFKAVARRDGRTAAECALSLSKQQNCPDPNAFIEEVEEAFTFWGTPEGDLVHPAECMEQLLEK VRRHRVNVDGNVCTVLVTTLVLEGWQRKLDPGYNVMQTLQTLLLRADWAKSLSYTIDGLMAP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 622 | 622 | 0.0 | – | |
| Phobius | 1 | 164 | 164 | - | – | |
| PANTHER | 1 | 622 | 622 | 0.0 | – | |
| Phobius | 165 | 190 | 26 | - | – | |
| TMHMM | 167 | 189 | 23 | - | – | |
| Phobius | 191 | 622 | 432 | - | – | |
| CDD | 250 | 540 | 291 | 2.35614E-151 | – | |
| SUPERFAMILY | 258 | 482 | 225 | 2.31E-13 | ||
| Pfam | 270 | 394 | 125 | 1.2E-31 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0189500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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