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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0189600 |
| Transcript ID | LotjaGi4g1v0189600.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | peptide transporter 1; TAIR: AT1G32450.1 nitrate transporter 1.5; Swiss-Prot: sp|Q9LQL2|PTR14_ARATH Protein NRT1/ PTR FAMILY 7.3; TrEMBL-Plants: tr|I3S7R1|I3S7R1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0189600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:43416268..43421755) extracted from Lotus japonicus Gifu genome v1.2.
ATGTCCTGCTTAGAGGTTTCCAAAGAGGTAAATTATATTAAACCATATACTATACACATGCACAACTTAATTTCCACATA AATATTTATGTATGTTTGTTCATTCCTTATTAATTCTGAAAAACCTTGACATAATCAATCAATCCCTCATTTCTAAATTA TCTGCAGGGGAAGTTCAAAGAAGAAGCAGAGGAGGTTACTCTTGATGGGAGTGTTGATTGGCATGGCCGGCCTGCAATTA GAGCCAAATCAGGGAGATGGGTTGCTGGAACCATCATTCTCTGTAAGTTCTTCCAAGCATTCATAATTAATAGCAGGGAA TTTTTTAGATTCATAAATTTCATTCTATTTAATTTAATACACTCATTATCTTTAGTGTACTTAGTTTTTCATTAATTACT TGTACCAGAAAAGAGTTTTTCATTGGTTACATGGTAATGCATTAAATCATCATAGGCCTACTTTCTGTGAATGCCTATTT TTATGGAAAGATTAAGTCAAGACTATAATAGTCATTGTTTTGTTACGATGATGAGAAAAATGAGGTGCAAGTCGATGTAA GGTTTAGAGATAAAGGAGGAAAGATAAAAGGAATTAGAGAAGTTCTTGTTGTTCACCCTTACAAATAGCAGGGCATTCTT TTGGATTTTAGTATAATTTATTTCTTAGTGTATGTACTTGTTTATCGTTACTTGGTATAATGCACTAAATCATAGGCCTA TTTCTTATTAAATCGATTCTAAAATCTAAAATTTACTCACAAAAAATTATTCTAGAAGATCTTAAAATTATTTGTAGAAA AATTATCAAACACAGTGTACTGATTGATTGTATCCTTGCACTTTTGTGTATTGATCTTATTGTTTGAGGTTCTCAATTAT TTTGTGCGTGTAATACGTCTACGTATGTTAGTTGATGATGATAAATATAGAGAAGAGTCGTGGCAGCACTAAGAGCCATA GAAGTTTTAGGAAACTTGTTGTCAGGCCTAAATATTGATGAATCAATGATGGGGTTTGTCGTTAGGCATGTTTATATTTT TTTTGAACTCAATATGGATTCATTATGTTGAAATTAACAAGTTAAAATTATTCTATTTTTCTGATCCATATTAAAGTTAA TGTGACAAATTTAATTTCTCCTTATTTACGTGATGAGATAAGTGAAATCATGTTAGCGTTAATTCTTACAACGGACCAAA CATGTACGAAGTATTATGTATCATAGATAGCTTATCAGGAGAATAGAAACAACTCTTGAACTTGCTTTTCCGAGCTGGTC CACAAACAAACAAGCTTAATTTCTAGGAAGTCTTTGATTTTCATTTAGGAGAAAACGACAACTCTAATGTAGGAACTTCA TGCTCCATTCAATTTACAGAATGAGAGTTTTTTCAATTCTAGGAGTCTTACTCCACCGTTATATTTATCTTTCCAGAGAG ACAAACTAGTTCTTTGACGAAGTGAAAGAAAAAAAACAGATAAAGAGATTCTGAATCCTCATAAAACGACACCACAAAGA GTAACTAGCTAGAGTGAGAAAATTGGCCGGTATACGTTTTAGAAGAATGCGTTCTTGACACGTAAGCAAGGGTAGGATCT TGCATGACGTGGGTCATTCATAGGAGTTTATATACATTAATTACACCCAAATTCTCTTGGTATGAATGAATTTGAACTAT CGAGTGAAAGATACACGTATTCACCATTCCTATTTTTAAACATTCAAAGAGTACCATTACTTCCTGTATATCTCATTACT TTCCTTATTTCTCTGTTTTTATCACATGTCATGTGATTTTTATTTATTTAGGGTGTATGAAACTGACATTTTCGATTCAC TAACCACTAAACTTGAGTGCAAGAAGAGTATTTTTCCATATTTAGTGCGCCCGAATTGAGTTGTGGACAGCACATAATTA GGTCATTCTATTAGTCAGGTTTTTAGGTATGACACACTATCCACAAAGTTATTGAATATTTTATTAAGAGTTTATAAGCT GTAACATTAAGACTTTAATTATTATATATTAATAGAGTAGACTCACATTATATATATATATATATATGAGTGTGTGGGGC AAAAAGTTTTGTATTTTTACTTTTTTGCAAAATTTTATCTAAAATATAAATTTTTACTTCTTTAATTATTTTACAGTAAT AAAAAGTGAATTATTTATTACTTTTGTAACAAAATAATATTTTTTACTTTTAAAACGTAGAACATTTTTTTTTAATGTTA TCCTTGTATTATAGTTTGATATTTCTACTAAGTAAAATGATAACTAAAATATTAATAGAGATAATAAAGTCACACACATT TTTATTTTCAACTTGAACATATTCAAAAAAAAATCAATTATTGAAATTTAAAATGATAGTTAGTAAAAGGTGACAATCAT GTCTCATTTCCAAAAATTTAAGCATATCTATTTTCATTTCACGAGTCTGCTGATTGTAATTTACAATTGCTCTCAATCCT AGCATGGCCTAAAACAGGCGAGCCATTTTAATTCTTTCCGAAAATAAGATATTAAAAGTGAAGAAAAATTGGTAGGTCAC TATCAAGATCCTTAGGGTAACCCAGAAGATTTTCGTGTGAGCTGAGAAAAAGGGCGCAAAAGAGCAACATGCGTGCGTAG CTGTGCTAAAATCTTTGATTTAAGTACCAAAAATAAATGAGATTGATTTTAAGACGGATATGCATATGCTGAAATAAAAT ATCTTCTCCCCTTAAGTAGCAAGTTAGGCCATACCATAGAAACTTTAATTTATCAATAGCTTCCATTTTGTAAATGTAAA AAGCATTTTCTAATAAGAGGAAATTATTTCTGCTTCAAATCATAATGTTAACCCAAAAAGATATCATGCTAATTTTGGTA TTTGCTTGTTTATGATGATAAAAAGTATCACCCTTCTGTTACTGGAAATTCGCCTCTCGATGACCGGATGTGTAGGTTTG TTGACGTGAAAATCACTTCAAAACTTTTGATTAAGAGTATTGGCTTATATTATTAAGCATGCGTGCACATTTTTGTTAGT GGTGCCTGATAAAGTAAAGTAGGGGTAATGCACCATTTTAAGGAATGATTGAATAATGATTTTCTCACCTTTTCTTTCTT GTCTCTTCTGTATTTTCTTTTAGGTTTAATTGGACTTTTAGTCCTTCTACTATAGTTGATGTGTGATTTGGTTCCTCCAT TAATATTTTTAGAAAATTCAGTCCCTCAATTTTCAAAATTGCTCCAATTAAATCCCCTATTCAGTTTTATTTTACATAAA AATATCTAATTCTAATTCTCGAAGTGAAATTTTGATATGTTGATTTCATTAAATCATTGTAAGCCTTCTACTCTAAACTA AACATCCAATTTATCAAGTTTCACCTAAATTTTAAAAAAACACAAATTTCTCCTCTTTAAACCCTAATTTTATCTCAAAA TCCTTTAAATTTTGAGAAATTTTCACTCATTTTTTTACTTTTGGATTTTCAAATTTATATTATCTCAAATCTATCATAAA CCCTAAATATTTTAAATGGAAAATGGAGATTTACAGATTTTTTTGTATATAAAAGTTGAAAAAGGGAGCAAATTTACTTA TTTTTAAAAGTATGAGGACTTAATTAGCTAAAAAAACTAGGATGACTAAAATGTAAAATCACAGTAAGTCCAACTACTAG AGGTACCAAAAATACAATTAACCCTTTCATTTATTTTTCTACTTAGAGCATCTCCAATGGTAGTATCTAATTTAAAATAC ATACTCATATGAGTATCTATTACCATTGAAGTACATATTCAATTACAACATAGCAAAGATGAGTATGTGGGAATAGATAC TCTATACTAAACTTGAAAAGTGAGCTTGTATTTATTACAAGCACTTACAATTAATTAAAATGGAGATAAATAATAAAAAA TACAAATGTGATGTTGATAGTGTGATCCACTATAGAAACTTTTAAGAGTTGTTGGGTTAGAGTAAAAAGTTAGTAAAGTG GTGTAGATGATGTGACATTATGGGGAATTGAAAAAATAAAGTGTAGATATTTTAGTGAGTATGATGGATGTAGATGCTCT TAGTATCTCTCACTTTCCCTCTTTTCAATTATTTCCCTTCTTATTCTATTTTCACTGCACTTTTCTCATATCTCAAGAGG TTGAGAGAATTATTATTGGTAAAGATTTGATGGAGATGTCATCCGTAATCAGTCTTCAATCCAAGAAAAGAAAAGAAAAA ACAGGGCACATTCAGAATTGATGTGTAAGACCAACTGCCCTATGGTAGATATTAATAATCCTGAAACTTGATTGATTTAG CCCAGCAAATAGCAACGGAAAAAGCTTTCTGGTATAATTCATGAAAATATTATAAATGATTAATATCAGTTAAATAAAAG TGAGTGACAGTTACTTCTAAAATTGACTTTTATGTGAATTTCACATATATTGTTGTATATTTCTTCTTTTCATATTCACC TTATTAATAATATTTTTACACAAAATAATAAAATATATGCATTAATCTTCTTTCACAGATGTTACTAAATTACTACTAAC ATGGTACTGACAATGCATATGTTGTTTGTTGCATCAATCAGTGAACCAAGGACTAGCAACCTTAGCATTCTTTGGAGTAG GAGTTAATCTAGTGCTGTTCCTGACAAGGGTGTTAGGACAAGACAATGCTGATGCTGCTAACAATGTGAGCAAGTGGACT GGCACAGTTTACCTCTTCTCTCTTGTGGGTGCTTTCCTCAGTGATTCTTATTGGGGAAGGTACAAAACTTGTGCCATCTT TCAAGGCATCTTTGTACTGGTAAGTAACATACTCTTAATTTCATTTTCCTCTCTTTTTCTTCTAGCTTGCCACATTCTTT GGGTAATTAACTTGTCTTCTGGTTTGATATAACAGGGTCTAGTATTCTTGTCCCTTTCATCATACCTCTCATTGCTTAGA CCTAAAGGTTGTGGGAGTGAACTGCTTCACTGTGGGAAACATTCAAGCTTGGAGATGGGGATGTTCTACCTATCAATCTA CCTCATTGCCTTAGGGAATGGAGGGTATCAACCAAACATTGCCACATTTGGAGCTGACCAATTTGATGAAGAGCACTCAA AGGAAGGTTACTCAAAGGTGGCATTTTTCAGCTACTTCTACCTGGCTCTGAACCTTGGTTCACTTTTCTCAAACACCATT CTGGGCTATTTTGAAGACGAAGGAATTTGGGCTCTTGGGTTCTGGGTCTCTGCAGGCTCTGCCTTTGCAGCACTTGTGTT GTTTCTTGTTGGGACACCAAGATATAGACACTTCAAACCTTGTGGCAATCCACTTTCAAGATTCTGCCAAGTCCTTGTTG CTGCATGGAGGAAATTGGGAGTTCAGATGACATCAAATGGAGAGGACTTGTATGTCGTGGATGAAGAGGAATCTTCCACC AACAGCAACAACAGAAAGATTATTCTCCACACCCATGGATTCAAGTAA
CDS sequence (LotjaGi4g1v0189600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCCTGCTTAGAGGTTTCCAAAGAGGGGAAGTTCAAAGAAGAAGCAGAGGAGGTTACTCTTGATGGGAGTGTTGATTG GCATGGCCGGCCTGCAATTAGAGCCAAATCAGGGAGATGGGTTGCTGGAACCATCATTCTCTTGAACCAAGGACTAGCAA CCTTAGCATTCTTTGGAGTAGGAGTTAATCTAGTGCTGTTCCTGACAAGGGTGTTAGGACAAGACAATGCTGATGCTGCT AACAATGTGAGCAAGTGGACTGGCACAGTTTACCTCTTCTCTCTTGTGGGTGCTTTCCTCAGTGATTCTTATTGGGGAAG GTACAAAACTTGTGCCATCTTTCAAGGCATCTTTGTACTGGGTCTAGTATTCTTGTCCCTTTCATCATACCTCTCATTGC TTAGACCTAAAGGTTGTGGGAGTGAACTGCTTCACTGTGGGAAACATTCAAGCTTGGAGATGGGGATGTTCTACCTATCA ATCTACCTCATTGCCTTAGGGAATGGAGGGTATCAACCAAACATTGCCACATTTGGAGCTGACCAATTTGATGAAGAGCA CTCAAAGGAAGGTTACTCAAAGGTGGCATTTTTCAGCTACTTCTACCTGGCTCTGAACCTTGGTTCACTTTTCTCAAACA CCATTCTGGGCTATTTTGAAGACGAAGGAATTTGGGCTCTTGGGTTCTGGGTCTCTGCAGGCTCTGCCTTTGCAGCACTT GTGTTGTTTCTTGTTGGGACACCAAGATATAGACACTTCAAACCTTGTGGCAATCCACTTTCAAGATTCTGCCAAGTCCT TGTTGCTGCATGGAGGAAATTGGGAGTTCAGATGACATCAAATGGAGAGGACTTGTATGTCGTGGATGAAGAGGAATCTT CCACCAACAGCAACAACAGAAAGATTATTCTCCACACCCATGGATTCAAGTAA
Protein sequence (LotjaGi4g1v0189600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSCLEVSKEGKFKEEAEEVTLDGSVDWHGRPAIRAKSGRWVAGTIILLNQGLATLAFFGVGVNLVLFLTRVLGQDNADAA NNVSKWTGTVYLFSLVGAFLSDSYWGRYKTCAIFQGIFVLGLVFLSLSSYLSLLRPKGCGSELLHCGKHSSLEMGMFYLS IYLIALGNGGYQPNIATFGADQFDEEHSKEGYSKVAFFSYFYLALNLGSLFSNTILGYFEDEGIWALGFWVSAGSAFAAL VLFLVGTPRYRHFKPCGNPLSRFCQVLVAAWRKLGVQMTSNGEDLYVVDEEESSTNSNNRKIILHTHGFK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 39 | 39 | - | – | |
| PANTHER | 10 | 310 | 301 | 1.8E-165 | ||
| PANTHER | 10 | 310 | 301 | 1.8E-165 | – | |
| Gene3D | 11 | 304 | 294 | 1.1E-90 | – | |
| SUPERFAMILY | 36 | 252 | 217 | 3.92E-17 | ||
| CDD | 40 | 254 | 215 | 8.21545E-117 | – | |
| Phobius | 40 | 68 | 29 | - | – | |
| TMHMM | 46 | 68 | 23 | - | – | |
| Phobius | 69 | 87 | 19 | - | – | |
| TMHMM | 83 | 105 | 23 | - | – | |
| Phobius | 88 | 105 | 18 | - | – | |
| Phobius | 106 | 111 | 6 | - | – | |
| Pfam | 108 | 284 | 177 | 4.8E-40 | ||
| Phobius | 112 | 134 | 23 | - | – | |
| TMHMM | 112 | 134 | 23 | - | – | |
| Phobius | 135 | 153 | 19 | - | – | |
| Phobius | 154 | 171 | 18 | - | – | |
| TMHMM | 154 | 176 | 23 | - | – | |
| Phobius | 172 | 191 | 20 | - | – | |
| Phobius | 192 | 211 | 20 | - | – | |
| TMHMM | 197 | 219 | 23 | - | – | |
| Phobius | 212 | 222 | 11 | - | – | |
| Phobius | 223 | 245 | 23 | - | – | |
| TMHMM | 224 | 246 | 23 | - | – | |
| Phobius | 246 | 310 | 65 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi4g1v0189600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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