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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0191500 |
| Transcript ID | LotjaGi4g1v0191500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Plant invertase/pectin methylesterase inhibitor; TAIR: AT5G46960.1 Plant invertase/pectin methylesterase inhibitor superfamily protein; Swiss-Prot: sp|Q8GT41|PLA1_PLAAC Putative invertase inhibitor; TrEMBL-Plants: tr|I3T7D3|I3T7D3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0191500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:43833079..43834074) extracted from Lotus japonicus Gifu genome v1.2.
CAGAATATTACCTTCCATTTGGCTTTTCCTAAAGCAAGTTTTTCTTGATCAATGAACATGCAGCATCAGATTCCTACCAA AATACCAGTTTAACATTCCTCACATATATAAATAAAAAAATTATAACACACTTTGCATCTATCACATTACAATAAGGTTT AAAGTTATATTCCATATCTCACAAACAGAGAAAAAAAACTACAATGAAGTTCTCCTTATGCTTAGTGGTTTTCCTTGTTC TCTTTCTCTTTGAATCCTCAAATGGTTCTAATAATCTTATCCTTCAATCTTGCAAAGAAGCCTCCAAGAGTGACCAAAAT TTGAGCTATGATTTCTGTGTTTCATCCCTTAATGATGCTTCCAACAAGACCAAACTACCCTCAAACCTTGAAGATCTTGT GGGCATGTCAATTCAGCTAACCAAATCCAATGGAACCAACATGCTTCCCATCATTAAGGAACTCTTGAAGAATTTAACTT CTGATGATCAATATGTGAAGGCTTGTTTACAAGATTGCTTTGATCTTTACAAAGATTCCCTTTCATCTTTAGAAGATGCC GTGGTTGCTTTCAAGTCCAAGGATTTATACTCAGCTAATATAAACTTGAGTGCTTCCTTGGATGATTCTATTACTTGTGA GGATCAATTTAAGGATAAGACAGGTAAAACGTCTCCTTTAACATGGGAAAACCATGTTTACTTCCAACTCAATGTAATGT GTCTGGCTTTTGTCCAAATGTTAAATCAACACTAAAAGCATGATTAATAGATTATGTACAGTTTGTAGTGTGTGTGATAT GTATAAAATTAATTTCATGAGCTTTACATAAGCCTGTTGATATATGTATATAATTATATAGTGTGTAATTTTTTTAATTG TTATTGTATTGAGATTGAAACGGTAAGTGTAATGCCCTTCATATATATATATGGAAGATTGGCTTTTATTTCCTCTGTTA CTTTCCTTCTATATAAGGTTCTGTTCTGTACTAGGG
CDS sequence (LotjaGi4g1v0191500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGTTCTCCTTATGCTTAGTGGTTTTCCTTGTTCTCTTTCTCTTTGAATCCTCAAATGGTTCTAATAATCTTATCCT TCAATCTTGCAAAGAAGCCTCCAAGAGTGACCAAAATTTGAGCTATGATTTCTGTGTTTCATCCCTTAATGATGCTTCCA ACAAGACCAAACTACCCTCAAACCTTGAAGATCTTGTGGGCATGTCAATTCAGCTAACCAAATCCAATGGAACCAACATG CTTCCCATCATTAAGGAACTCTTGAAGAATTTAACTTCTGATGATCAATATGTGAAGGCTTGTTTACAAGATTGCTTTGA TCTTTACAAAGATTCCCTTTCATCTTTAGAAGATGCCGTGGTTGCTTTCAAGTCCAAGGATTTATACTCAGCTAATATAA ACTTGAGTGCTTCCTTGGATGATTCTATTACTTGTGAGGATCAATTTAAGGATAAGACAGGTAAAACGTCTCCTTTAACA TGGGAAAACCATGTTTACTTCCAACTCAATGTAATGTGTCTGGCTTTTGTCCAAATGTTAAATCAACACTAA
Protein sequence (LotjaGi4g1v0191500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKFSLCLVVFLVLFLFESSNGSNNLILQSCKEASKSDQNLSYDFCVSSLNDASNKTKLPSNLEDLVGMSIQLTKSNGTNM LPIIKELLKNLTSDDQYVKACLQDCFDLYKDSLSSLEDAVVAFKSKDLYSANINLSASLDDSITCEDQFKDKTGKTSPLT WENHVYFQLNVMCLAFVQMLNQH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 30 | 30 | 5.0 | – | |
| Phobius | 1 | 21 | 21 | - | – | |
| TIGRFAM | 1 | 180 | 180 | 3.1E-34 | ||
| Phobius | 1 | 4 | 4 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 21 | 21 | - | – | |
| PANTHER | 1 | 181 | 181 | 2.4E-76 | – | |
| PANTHER | 1 | 181 | 181 | 2.4E-76 | – | |
| SignalP_EUK | 1 | 21 | 21 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 21 | 21 | - | – | |
| Phobius | 5 | 16 | 12 | - | – | |
| Phobius | 17 | 21 | 5 | - | – | |
| SMART | 21 | 176 | 156 | 5.1E-23 | ||
| Phobius | 22 | 183 | 162 | - | – | |
| SUPERFAMILY | 23 | 180 | 158 | 2.35E-30 | ||
| Gene3D | 23 | 183 | 161 | 2.7E-31 | ||
| Pfam | 25 | 175 | 151 | 2.0E-22 | ||
| CDD | 30 | 179 | 150 | 1.75096E-41 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Enzyme inhibitor activity | Binds to and stops, prevents or reduces the activity of an enzyme. |
Expression pattern of LotjaGi4g1v0191500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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