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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0207400 |
| Transcript ID | LotjaGi4g1v0207400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 14 kDa proline-rich protein DC2.15; TAIR: AT1G12100.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; Swiss-Prot: sp|P14009|14KD_DAUCA 14 kDa proline-rich protein DC2.15; TrEMBL-Plants: tr|A0A151R549|A0A151R549_CAJCA 14 kDa proline-rich protein DC2.15; Found in the gene: LotjaGi4g1v0207400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:48090483..48090887) extracted from Lotus japonicus Gifu genome v1.2.
ATGAGTTCTTCTAGACCTTCCACTCTCGCTCTCTTTCTCACCACCAACTTGCTTTTCTTTGTTGTGTCAAGTGGCTGCTA CACTTGCACAACACCAAACTCAAACCCAACCCCGAACTCGTTCCCTTTCCCTAGTCCCGCCACGAAGAGCTGCCCTAGAG ATGCACTCAAGCTAGGAGTGTGCACCAACCTTCTCGGTTCACCAATCGGTGCGGTGGTCGGGTCACCGCCGGACCACCCA TGTTGCTCGATTCTAGAAGGGCTTCTTGATCTTGAAGTTGCGGTTTGCCTCTGCACTGCCATCAAAGCGAACATTCTCGG CATTCACCTTAACATCCCCATTACACTCAGCTTGATTCTTGGCGCATGTGAGAAATCTCCACCCTCTGAGTTTACGTGCG CCTAA
CDS sequence (LotjaGi4g1v0207400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTTCTTCTAGACCTTCCACTCTCGCTCTCTTTCTCACCACCAACTTGCTTTTCTTTGTTGTGTCAAGTGGCTGCTA CACTTGCACAACACCAAACTCAAACCCAACCCCGAACTCGTTCCCTTTCCCTAGTCCCGCCACGAAGAGCTGCCCTAGAG ATGCACTCAAGCTAGGAGTGTGCACCAACCTTCTCGGTTCACCAATCGGTGCGGTGGTCGGGTCACCGCCGGACCACCCA TGTTGCTCGATTCTAGAAGGGCTTCTTGATCTTGAAGTTGCGGTTTGCCTCTGCACTGCCATCAAAGCGAACATTCTCGG CATTCACCTTAACATCCCCATTACACTCAGCTTGATTCTTGGCGCATGTGAGAAATCTCCACCCTCTGAGTTTACGTGCG CCTAA
Protein sequence (LotjaGi4g1v0207400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSSRPSTLALFLTTNLLFFVVSSGCYTCTTPNSNPTPNSFPFPSPATKSCPRDALKLGVCTNLLGSPIGAVVGSPPDHP CCSILEGLLDLEVAVCLCTAIKANILGIHLNIPITLSLILGACEKSPPSEFTCA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 24 | 24 | - | – | |
| PANTHER | 1 | 134 | 134 | 4.0E-61 | – | |
| SignalP_GRAM_NEGATIVE | 1 | 28 | 28 | - | – | |
| Phobius | 1 | 7 | 7 | - | – | |
| ProSiteProfiles | 1 | 26 | 26 | 5.0 | – | |
| PANTHER | 1 | 134 | 134 | 4.0E-61 | – | |
| SignalP_EUK | 1 | 25 | 25 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 28 | 28 | - | – | |
| Phobius | 8 | 19 | 12 | - | – | |
| Phobius | 20 | 24 | 5 | - | – | |
| Phobius | 25 | 134 | 110 | - | – | |
| Gene3D | 47 | 134 | 88 | 6.9E-26 | – | |
| CDD | 48 | 133 | 86 | 6.92727E-26 | ||
| SMART | 51 | 133 | 83 | 4.3E-5 | ||
| Pfam | 51 | 134 | 84 | 4.3E-23 | ||
| SUPERFAMILY | 53 | 133 | 81 | 1.76E-22 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0207400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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