Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0207800 |
| Transcript ID | LotjaGi4g1v0207800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 14 kDa proline-rich protein DC2.15; TAIR: AT4G12510.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; Swiss-Prot: sp|P14009|14KD_DAUCA 14 kDa proline-rich protein DC2.15; TrEMBL-Plants: tr|A0A0D2MRH1|A0A0D2MRH1_GOSRA Uncharacterized protein; Found in the gene: LotjaGi4g1v0207800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:48133098..48133766) extracted from Lotus japonicus Gifu genome v1.2.
TCTAATGAAAGTTAAGAACATATCCATAGAAACTCTTCTCTTGAGCTCAAGCCTCTAGTAGTTAAGAGTTTAGTTAGAAA ACACTAACAATAGCTTCAAGAGTTTATGATGGCCTCTAAACCTTGTTCCCACCTTGCTATTTTCCTGACACTCAACCTCA TCTTCTTTTCACTTGTCACAGCATGCGGTAACAAAAATTGCCCTCCTCCAACATCAAACCCCAACCTAAAACCTAACCTT TCTTCAAGCGGAAAGTGCCCCCGTGACACACTCAAACTAGGTGTGTGTACTGATGTGTTGGGGTCGTTGTTGAACGTGAC ATTAGGTCAACCACCAGTGGCACCATGCTGCTCCTTCTTCCAAGGCCTTGTTGACCTTGAGGCTGCGGTGTGTCTCTGTA CCGCCCTTAAAGCAGACATTTTGGGCATCCATCTCAACATTCCCATCTCACTCCGTTTGCTCCTCAACGTTTGCTCAAAG AAAGTCCCAGATGGCTTCCAATGTGCCTAATCATACACACCAATAACTTCTCTTTTTCTATAGTTTGAGTACTATTGTAA TAACCCGTGCGATGCACGAGATAGTATTATATTGAAAATTTATTATGCTATATTAAATAGGCTTAAAAGCATTTTTGGTC CCCCACGAATTCGAAATGTGCAAAAGGAG
CDS sequence (LotjaGi4g1v0207800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGGCCTCTAAACCTTGTTCCCACCTTGCTATTTTCCTGACACTCAACCTCATCTTCTTTTCACTTGTCACAGCATG CGGTAACAAAAATTGCCCTCCTCCAACATCAAACCCCAACCTAAAACCTAACCTTTCTTCAAGCGGAAAGTGCCCCCGTG ACACACTCAAACTAGGTGTGTGTACTGATGTGTTGGGGTCGTTGTTGAACGTGACATTAGGTCAACCACCAGTGGCACCA TGCTGCTCCTTCTTCCAAGGCCTTGTTGACCTTGAGGCTGCGGTGTGTCTCTGTACCGCCCTTAAAGCAGACATTTTGGG CATCCATCTCAACATTCCCATCTCACTCCGTTTGCTCCTCAACGTTTGCTCAAAGAAAGTCCCAGATGGCTTCCAATGTG CCTAA
Protein sequence (LotjaGi4g1v0207800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMASKPCSHLAIFLTLNLIFFSLVTACGNKNCPPPTSNPNLKPNLSSSGKCPRDTLKLGVCTDVLGSLLNVTLGQPPVAP CCSFFQGLVDLEAAVCLCTALKADILGIHLNIPISLRLLLNVCSKKVPDGFQCA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 26 | 26 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 26 | 26 | - | – | |
| ProSiteProfiles | 1 | 27 | 27 | 5.0 | – | |
| SignalP_GRAM_POSITIVE | 1 | 28 | 28 | - | – | |
| SignalP_EUK | 1 | 26 | 26 | - | – | |
| Phobius | 1 | 9 | 9 | - | – | |
| PANTHER | 5 | 134 | 130 | 3.4E-51 | – | |
| PANTHER | 5 | 134 | 130 | 3.4E-51 | – | |
| TMHMM | 7 | 26 | 20 | - | – | |
| Phobius | 10 | 21 | 12 | - | – | |
| Phobius | 22 | 26 | 5 | - | – | |
| Phobius | 27 | 134 | 108 | - | – | |
| Gene3D | 45 | 134 | 90 | 3.4E-27 | – | |
| CDD | 49 | 133 | 85 | 2.16124E-29 | ||
| Pfam | 50 | 134 | 85 | 1.8E-26 | ||
| SMART | 51 | 133 | 83 | 4.5E-7 | ||
| SUPERFAMILY | 53 | 133 | 81 | 1.04E-23 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0207800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…