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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0208600 |
| Transcript ID | LotjaGi4g1v0208600.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Trehalose 6-phosphate phosphatase; TAIR: AT4G22590.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q9SUW0|TPPG_ARATH Probable trehalose-phosphate phosphatase G; TrEMBL-Plants: tr|V7CFF0|V7CFF0_PHAVU Trehalose 6-phosphate phosphatase; Found in the gene: LotjaGi4g1v0208600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:48405409..48410630) extracted from Lotus japonicus Gifu genome v1.2.
GAATCAAACTAACTTGATAGGAAATAGTACTTATCCCCTCAAACATATAAATAGCGGAAGCCTCCCTTTGTTTGTTCATC CCCTTCATCCCGTCTATTCCTCATCTTTGTTCAAGGTGATTAATTATTCATCTCTTTTATACTTTCCAGCCATTCAGATC TCTAAATACGTTTCAGTAAAAAAAACTCCCCCTTCTCTTTCCTTTTTGGGTTATTGATGTGATTTTGTTTTAGGACTTTT GAACGCGATTGCTCTCTACGCCGCTGAAAACAATCGTAACTTATAATTCTGGTATGATCTCGATCTTACCTTTATGCTTA CCGTGAAAGGATCCGAATTTATGATTTCATTGTTTAAGATGTGTTCTTGAGCAATCAAATACAAAACCCATCATGTGTAA AATGCTCATGTACCAATCTAAAATCGTTTTCATCTGATATATTATATATTTTTGGTAATCGTGGCCATGCATGAATCATC ATCCTGAGCATGATCTATTTTGTGAGCTTTCTTTTTATCTTTCTTTCACCAAATTCTTTCAACAATCTTATTAGATCTAA ATCTAGATTGTAGTTGCCTTATATGTGCAACTGGAAGTCCTAATATAAAAAAGTAAACATTTATCAGCCAAGGGACATGA AATCATTTCAGACTTTTGATGGATTCAGCTCAAATATTTGATTCTTTCCTTGTATTGATTTGTTCTGCCATGAATTCCCT TTTCCTAGGATAGCTTTTTATACCCTGCAACCCTATATTTTATATTTTATTAAGAAATTGAAGGTTTTCAATGACACAGT GAAATAAAAGGATTTACTTACTGCGAAAGAGGTTTTCTTGCACAATGTTTGGTTATAGACTGGACATTTCCCATTATTAG CTTATTGGTTGAGGTGGTACTTGCGATTATCCTTAAGCAATGTATTGGTTTCGAGTCCTGTGAATGACAATACAACAATA CACTCTGCTGGGAGTCTTGTGAATGTAATTTTTTTTGTGATTTTACCGTCTTGAGAAAAACAAAGATTTAATGCCTATAT TGCAGATCCTGCAATAATCACTCTCAAATCAGAAGACCTTGATCGTTAATACATTCCTAGTTGCAAATGCAATGTTGTAT ATAAGAAGGTATTTGTTGGTTTTCATTTGTTTCATATGCCTTACATTTTGTTTTGCATGTCATGGAAAATCCCAATTTGC TTCCTATTGCAGGGAAACCCGTGCTTGATGGACTGCTCACACAGTAGCAGTGACAAGAAAACATTAAAGCGGTGGTTTTT TATAGATAAGAGAGTAGGTTAAGCTAAAATCTAGGATAAGTTGCACATAAATAATCCCTCTTCTCATGACATAGTCACTC ATAATATCAGACCTATCATTTATTACCTTTATTGAAACTTGCCTCTCAAATAGTCTAGCTAGCTAGGTTTAATGGATTTG AAGTCTTCTCATGCTTCTCCCTTACTTACTGATCCTGTTCCTATCAACAAGTCACGGCTTGGAATCCATCCTAATCAGCT AGCTTACTCTCATCAAGATTCATCAATGTCTTCCGGGAAGTTCACAAAATCCAGCTCAAAGAAAAGTATAGGGAGTCTTG ATGATGTCAGGTCCAATGGTTGGCTTGATGCTATGAAGGCTTCTTCCCCTCCTAGGAAGAAGTCACCTAAAGGTTCAAGT ACTCAAGTTTCCGCAATTGACAATGACATTGAAGACTATAATTCATGGATGGTATGCATTGTACTTAACTTTTTGCATGT TGTTCAATGTTTGGTTTATAGCATGTTTAGATTAACTTCTCTTTTTTTACCATCAATTCTAAATCGTAGAAACAATTTAT AGAAACGTATCTCGAGGATTGATTTTGACTTAGAATCAATTATAGAAAAAACTCCTAACATGCACTTATTTGAATTCACT TCATTGGTCATGTTAAAAAATCTCCTAAATTCTCACTAATTCATTTTATTTTACCAGTTGGGTTATCCTTCAGCAATAGA TTCTTTTGAGGAAATTGTTGATCGTGCTAAGGATAAGACAATTGCAATGTTTCTTGACTATGATGGCACACTGTCACCAA TTGTAGATGATCCAGATTGTGCCTTTATGTCTGAATATGTAAGTAATGCATAGTGGATTCTCATAAAATATATTAATAAT TCCTAATTAGTAAATTCTTTCTCTGTTCTCAATGTTATTTTTATCTTCCTTTTTCCCTCTCTCAAAATCATGCTTAGATG CGCAAAACTGTAAGAAGAGTAGCAAAGCATTTCCCTACCGCAATCATAAGTGGGAGAAGTCGTGATAAGGTAACCAGGAT GAATTATTTGAAATTCTTCAATGAAGCACTATTTAGAATCACTTCTGAAAACCAGAAGCTACTCACAAAAGCTTCTTTCC AAGTTATATTATGACATAAGAATCAATTCTAGAAGGATTTATAAACATGTTGTAAGTCATTAACATATGGTTACATCCCT TTCAGGTGTTTGATTTAGTTAAACTAACAGAACTCTACTATGCTGGTAGTCATGGGATGGACATTATTGGCCCTGTTAGT GAGACTTTGTCAAAAAACCATCAAAGTTGTGTCAAGTCTACTGACCTTCAGGTATGTAATAATAGTAAATTAGTTTTTTA TTCTTGGAATCTTCTATACATTAATAAATGTCAAATAGTTAACTATTTCTTCAAAATGGCAGGGAAAAGAGATAACTCTT TTTCAACCTGCAAGAGAATTCATTCCTATGATTGATGAGGTGAAATTTTTGTCTCAATTAATCTTGAAGAAGTATTCACT TTTAAATGTATAACAATGAAATAAATGATGGGGTGTTTTCATGTAGGTTTTTAGAACCCTCATTGATCTTACAAAAGACA TAGAAGGCGCCAAAGTTGAAAATCACAAGTTTTGTGTTTCTGTACATTATCGTAATGTAGAAGAGAATGTAAGGATTTTT ACCACAACAATTATAAGTTGATGTCTTTTTTCATTATTATTTTGATGTTCTCATTATTTTAATTCTTGAATCGATTGTAG AATTGGACAACGATTGGTCAGCGGGTCCATGATATGCTAAAAAATTACCCTCGTTTACGCTCAACTCATGGACGGAAGGT ACCCTAATTCCAATGAGAAATATTATAAACTTTGTTCGTTGTAATAATTTTTTTAACTTTTCATGATAGTTATTAATTGA TATTTTAAGCATGCTTGAGAATATTTTTATAATTAATTATAAAATGAAAAAACTGTTATGCTGGGATTTTATAAGTAACT CCAAGATAACAAAATTGATTATGAAAAATAAATTAATCCAAACATGCTATTTAAGTAACTCTTGACTCAAGTTTTTTAAT GCACCATAGTGTATTTCAATTTGTTACATTATAATACATTTCCTTGTGTGTGTGGTGTTATAGGTTTTAGAAGTTCGTCC AGTGATCGACTGGAATAAAGGAAAAGCTGTTGAATTTTTACTTGAATCTTTAGGTAAGAACCTATTTTTGACTTTACACA CCACATATAACAAAGGTATTCAAAGGATACAATATGGAGTAAATTATGGTCTTGTGCAGGGCTAACTGATAGGAATCATG TGCTTCCCATCTACATTGGAGATGATAAAACCGATGAAGATGCATTCAAGGTACTAAATCAAAGTTGTGTGAACTAGAAT TTTCAACTTTTCATCTATAGGTTGTTTGCAAAAGAGTTGTGCACACACTTCAATGCACGTTTGAGTAAAAGCTATAAATT GAAGCTTCCGAGTAACAGACTTATATGGTGTTTGCAATGTGGTTCCAAACACATGCTTATGGTAAATTAGGATTGGCGAT GGGTAAACAATCCAAATAATTGTAGCTTCTTCCTATAATTGATTATGAATTTTTTTACCACATAATCAAACATGTTACTA ATCTTCTTATACAACTCCATATTATAATTACACATGAGAAGTCATGTGAAATTTTCTCATTTATCTCTCTTTATGGACAC AAATTTATACAATCACACTGAATGTTTGTATATATTTAGGTGCTTAGGGAGAGCAATCAAGGTTATGGGATTTTGGTATC ATCTGTGAGGAAAGAAAGCAATGCCTTTTACTCTCTCCGAGACCCCACTGAGGTTTAAATCCCAACACATTTTATATACT CTTTCATGTACACTATCAATATGATTCTTCATATTTGGAGCTGAAGGACATTATAATTATATATATATATATATATATAT ATATATATATATATATATATATATATATATATGCAGGTGATGAAGTTTCTCCAACTCTTGGTCAATTGGAAGAAACAACA AGAAAGGAAGCGTGGAAAAAAATAAACCTGTATACATATATATAATTTAGTACATATTAGGTTTTGATTTAAAATGTGAT TAGATCAGCATTTTGTTTTAATACCAATAAGTTATTATGAATGAAAATTTTTAGATATTGTGGATTTTTATTTTGTTTTG AAATTTTTGCATTGTTAATATTTTCGAGTTGCATGGTTGTGATGTATATATCATATATCTACCATATTGATTCAGGGAGC TTTTGAATTAACTTTTGTGCAACTTCTACCACTCTCCATCTATTTACATTGTCAACCTCTTGTCTTTCTCTTTTGTTGTA TTAATCATATCCTCACAATTCAATAGACCTTTCAGCCTAGTACTTAATTAATATTTTGTCAACTTGAGCATCGCTCTGGA TCTTGTATCCTCCATTTATTCATCCTTGATCTACACTTCACAGTTGAGTTTCAACAAATTGAACCCACTATTGCATCCAG AACAATCTTAAAATTTGTGGACAACTAATGTCTGACACAAAAAATGGATAAAATTTATTTTGATTTCTCAAGATTATTAA TTGAATTTCAACAAATAGAAAACACTCTATTGTCCAAAATGGTCTAAAACCTTGACTACGTGTCTTGTTGGGCCTAAAAC AGACAAAAAACAGTCCACGTCATCATTGTCATGTTTACACCTCATATGTCATATTATCCATCGTTTTTTTTTTACCATCC CAATGCCTCATCATCCACTACGTTATCATTGCATCATATTGTTTATGTGGATTTACATGCGAATTCACCTTCTTCAGTGC GGGGTGTGTGGTTCCTATAGGCCTCTATTTGACCTGATTTTAGCATTTCTAAACTCATCTCATAAAAAGGAATCCAATTT TTACCTCCATAATGAATTTGAG
CDS sequence (LotjaGi4g1v0208600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATTTGAAGTCTTCTCATGCTTCTCCCTTACTTACTGATCCTGTTCCTATCAACAAGTCACGGCTTGGAATCCATCC TAATCAGCTAGCTTACTCTCATCAAGATTCATCAATGTCTTCCGGGAAGTTCACAAAATCCAGCTCAAAGAAAAGTATAG GGAGTCTTGATGATGTCAGGTCCAATGGTTGGCTTGATGCTATGAAGGCTTCTTCCCCTCCTAGGAAGAAGTCACCTAAA GGTTCAAGTACTCAAGTTTCCGCAATTGACAATGACATTGAAGACTATAATTCATGGATGTTGGGTTATCCTTCAGCAAT AGATTCTTTTGAGGAAATTGTTGATCGTGCTAAGGATAAGACAATTGCAATGTTTCTTGACTATGATGGCACACTGTCAC CAATTGTAGATGATCCAGATTGTGCCTTTATGTCTGAATATATGCGCAAAACTGTAAGAAGAGTAGCAAAGCATTTCCCT ACCGCAATCATAAGTGGGAGAAGTCGTGATAAGGTGTTTGATTTAGTTAAACTAACAGAACTCTACTATGCTGGTAGTCA TGGGATGGACATTATTGGCCCTGTTAGTGAGACTTTGTCAAAAAACCATCAAAGTTGTGTCAAGTCTACTGACCTTCAGG GAAAAGAGATAACTCTTTTTCAACCTGCAAGAGAATTCATTCCTATGATTGATGAGGTTTTTAGAACCCTCATTGATCTT ACAAAAGACATAGAAGGCGCCAAAGTTGAAAATCACAAGTTTTGTGTTTCTGTACATTATCGTAATGTAGAAGAGAATAA TTGGACAACGATTGGTCAGCGGGTCCATGATATGCTAAAAAATTACCCTCGTTTACGCTCAACTCATGGACGGAAGGTTT TAGAAGTTCGTCCAGTGATCGACTGGAATAAAGGAAAAGCTGTTGAATTTTTACTTGAATCTTTAGGGCTAACTGATAGG AATCATGTGCTTCCCATCTACATTGGAGATGATAAAACCGATGAAGATGCATTCAAGGTGCTTAGGGAGAGCAATCAAGG TTATGGGATTTTGGTATCATCTGTGAGGAAAGAAAGCAATGCCTTTTACTCTCTCCGAGACCCCACTGAGGTTTAA
Protein sequence (LotjaGi4g1v0208600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDLKSSHASPLLTDPVPINKSRLGIHPNQLAYSHQDSSMSSGKFTKSSSKKSIGSLDDVRSNGWLDAMKASSPPRKKSPK GSSTQVSAIDNDIEDYNSWMLGYPSAIDSFEEIVDRAKDKTIAMFLDYDGTLSPIVDDPDCAFMSEYMRKTVRRVAKHFP TAIISGRSRDKVFDLVKLTELYYAGSHGMDIIGPVSETLSKNHQSCVKSTDLQGKEITLFQPAREFIPMIDEVFRTLIDL TKDIEGAKVENHKFCVSVHYRNVEENNWTTIGQRVHDMLKNYPRLRSTHGRKVLEVRPVIDWNKGKAVEFLLESLGLTDR NHVLPIYIGDDKTDEDAFKVLRESNQGYGILVSSVRKESNAFYSLRDPTEV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 371 | 371 | 9.7E-200 | – | |
| MobiDBLite | 1 | 87 | 87 | - | – | |
| PANTHER | 1 | 371 | 371 | 9.7E-200 | – | |
| MobiDBLite | 26 | 56 | 31 | - | – | |
| TIGRFAM | 121 | 371 | 251 | 1.4E-42 | ||
| CDD | 123 | 371 | 249 | 4.6647E-59 | – | |
| SUPERFAMILY | 123 | 371 | 249 | 5.9E-42 | ||
| TIGRFAM | 124 | 342 | 219 | 4.0E-16 | ||
| Gene3D | 124 | 365 | 242 | 2.9E-42 | ||
| Pfam | 125 | 368 | 244 | 1.6E-71 | ||
| Gene3D | 205 | 299 | 95 | 2.9E-42 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Biological process | Trehalose biosynthetic process | The chemical reactions and pathways resulting in the formation of trehalose, a disaccharide isomeric with sucrose and obtained from certain lichens and fungi. |
Expression pattern of LotjaGi4g1v0208600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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