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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0208800 |
| Transcript ID | LotjaGi4g1v0208800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transaldolase; TAIR: AT1G12230.1 Aldolase superfamily protein; Swiss-Prot: sp|Q65PZ8|TAL_MANSM Transaldolase; TrEMBL-Plants: tr|I3TA48|I3TA48_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0208800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:48481172..48487483) extracted from Lotus japonicus Gifu genome v1.2.
CATCAATACTGTCTGAGTTTGGTTATTGTTTATTTTAAGGAACTGGTCCTGTTCGGCTGAATTTGTAACAGAGCTCACAA GAGTTTGTCACTGAGTTAGCAGAAATGCCTGTCACCTTGCAATCTCCGCCTTCAGCAGCAGCGTTCTCTTCCGCCGCTGC ATCATCTTCCATTCACCGGAGGATCCATTCCACTCCGCCGCCGACTCTACCCTTCAAATCCCAAAGGTCCTTCCCTCTCA TTCGCGCTTCCTCTTCCTCCATCAACACCGGTAATCAACAATCACCATGCACCTCTTTTTCTTCTTTCTCCGATTTCCAA ATTATCCTCTATTTACAGTTTCTGTTTTCGATTTTCCTGTGCTGCAGCTTCGATCACTGAATTGGATGCTGTATCTGCCT TCAGCGAGATCGTTCCAGACACTGTCATCTTCGATGATTTCCAAAAGTAACATTGATTTGGCTTCCTCCTTCGCTTGTAA TAACTATGGGATTTGAATGAGTGAATGTTTGATCGGATGAAGAATTGAACTTGGTGTTTCAGGTTTCCTCCAACTGCTGC CACTGTCAGTTCATCGCTTCTCTTGGGTATATGTGGACTTCCAGATACCGTTTTCAGGGTTAGTTAGCCCTTTTCATCTT TCAAAACTTAACATGTGCATTTTGGTCTCAGTTTGAGTTAGCCAGCAAGTTACATCTTTTTATTGTGTAGAATGCTGTGG ATATGGCTTTGGCTGACTCTGAATGTAATGGGCTGCAAAATCCTGAGGCAAGACTGTCTTGTTTTGTCAACAAGGTATTT CTTTTATTTCATGGGTTTTTACTTGCTGATGCTTATTTATGAATTTGATTTATATATAACTTGAAGAGCACGTTTCTAAC TTGTTTTATGGATTTGATCCTGTAACTTAGGCCTTAGTGAATGTCGGTACTGACTTGGCGAAGCTTGTCCCTGGCCGTGT TTCAACAGAAGTGGATGCTCGTCTTGCGTATGACACACATGACATAATTAGAAAGGTACTAGATTCTGTTTCATGAGATT TATGATGTTAGAATTCTATTGCTGTGGGTATTGAACATGAGAGTATAATGTTAAGGACATCTGGAGGTTAAATGTCTTCC TTATCAGAGTTGTCAAATTGAAAGTTTTCTAATGTTATCACATCTACGAAGTTCATATAAAGTTGTTCTGCCCCAGTTGA GAGTAAGTGCTGTAGTATCCTCAAAATATTAAATAAGTAACAGTTATGATTGTGGCACCAGATGTAGGGAAGCAATGGTT TGAATACCTATTTGGATAGCATTGAAAGGTTTATTTGGGGTTTGGGTTTTGTCTGTTCACCAAAATGAAGTTGTATAGTT GACAAGTAGTTTGTTTTAAAGTTTGAAGACCACAAATGGAAGATTTAGGCTTCACAATACACTTTTGCCTAAAGTAAAAA TTTGGCCTTTCTGTAATCTGCACTGGAATATTGAATTCTGTCGAGTAAAATGTGAAACTAACAGGCCAAAAGTTGTTTAG GTGATCTTTTGCCTTAATCAAAACTACATTTGCAGTGAGTAGATTAGTTTTAAGAGAAGTGAATTTCTTTTCCCATTGAG AACAATTCATTCTAGATTTTGAGACCCATACGATGTATCCATACTTAGTTATTTACACTTCAAAGCTAATTTTATCTCAC CATCTAGACAAAATCAATTGTTCTAAACTCACCTATAAATAGTATTCCCAAACATAAATCAACTTTTTTAACCTCCATTC TTTCAAAATCAATTCTACCAAAATTCATAACAATCAGGCACCCTAAGTTAATTGTGCACCATTATCATGTCTACAATGCC AAAATTGAGGAGATAAGTGTGTCTGTGTATGTGTGCGCGTGTGAATTCTAAACTGTGTTGAGTTCTGTACAGCGAATGGC TGTTAATCTGTTTAAAAACCAGCCTCATTTTTAGTAAATCCGTATTGCTCTACAAAAGGCATATGTATTCTTCGTTGGGG AAATCTGATGCTACTGTTATCAAATTTTACAGGTGCATGACCTGTTGAAGTTGTACAATGATAATAATGTTCCTCCTCAA CGTCTGTTGTTTAAAATCCCCTCAACATGGCAAGTGAGTAATCAGGAAAAGTAAATGGCAGTGCCAACTGAGTTGAGAAA TACCGATGCTTCACCAAATGTGCTGAGTGCTTGTTTTCTTTTTTATTTAGGGAATAGAGGCTGCAAGATTGCTGGAATCC GAAGGAATACAGACACATTTGACTTTTGTTTACAGGTAGTTTTGTTGAATATTTCACGAAAAACTCTTGAGGTTAATACA CGAAGGATGTCATTTGTTCACACTGCTTAAAGAGTTAGTTCTGCCATTTTGTACGTAAAGCTTTATGTTTTTAATGCTCC CGGTACACGGAAAATATTATTTCTGAACTCTAGAAATTATTGGATGGTAACTGGTAAGTTTGATGACTTTGTTGCAATTT CACTTTTATCTTCATCTGAGCTAGTATGATCTAATGATTCTTTTGTACGATGGAATCTCCTATTTGACATCTTTATTCAT AACGATGATAATTCTAAACTAGTTTGTAATTTGTTGAAGCTTTATGTATCAGCTTGCATGTTGGATGTAAAACCTAAATC CTAATCGTCAAATAATAAATGAAAAGAAATTCCTGTAACATAACTTCTAAAATATGTTGATACAAACCTCTGATCATAAA TAACAAAATATTACTATAGTAGTGGCAATGTTTGAAATCACATGTGTAAAATATTTGCTCTGATGAAAATCGCATGTTTA GGTAGTGCTGATGTGAAATTTTTACCAATCCACTTATAAAATTCAAACGTTTAAGTACATCCTAGGATCTGGTGGCAGTG TTTTATTCCCATTTGATATAAGTATTTTGTATTTTACACAGCAATGGATCTTTTCTTTTTAAAATTTCACCTGACTGGTG ATGTTAAAATGTTGTGTCCAATTCTCTTTGTAAACATTAAATGGATGGAGTCCTATCAAAGTTTGTAAATATTTATGAAG TGAGAAATAAATATAAAATTCGACATGACAAGCTCATGTGAAATTTTAACATCAGATTATCTATCCTCATTTTATCCATT CCTAATCATTTTGTGGATTGGTTCTATTTCTTCAGCTTTGCTCAAGCTGCTGCTGCGGCTCAAGCTGGTGCTTCTGTTAT ACAAATTTTTGTTGGCCGCATCAGGGTAATTTCTATTTTTATTTCTGCGATGTGTTACATAACACTTACTAGTTACTAGG GAATCTTATCTAGCCTTTGTGATTTTTCAGGACTGGGCACGTAATCATTCGGATGACAAAGAGATAGAATCTTCCAAGCT AAGAGGAGAAGATCCCGGGTTGACATTGGTCTGTAGTCAATAATGCTCTTCCGTTCATGCTCTGGCTATCCTTAGAATTT AAATTTACTTTCACTAAAATAAACTCGTAAAACTTTGGGTGGAAATTTAGAAGAAAAATGTTAGTAACACTCTTAAAACT CTTTTCAACACTTTCTCATTTATTGGTTGATTTGAAATACATGTGGGGACCACTAAATGTGGGCCCCAATCCAATTTAGT TGGACCCACATGAATTTCGACTAATAAAAGGGAGAGGGTTGAAAAGAGAGTGTTAAAGTAAGTGTTGCTAGCACTCCTCA AACTTAGAAATATAGATACTGAATGCTTCTGTCGTCCCAGTTTAAGTCAGCAGCGTTGGTATGACTTGTGGGACTGGAGC CATCTTGATTCGTGCAAGAATCAGAATGGTTATGATATGATAGTGTTACTAAATGCATTATTATTATTTCAGGTTACAAA AGCTTACAATTATATTCACAAGTATGGACATAAGTCAAAGTTGATGGCAGCAGCAGTTCGCAACAAGCAGGATCTATTTA GTCTTCTGGGGTATTCTAAGACTTCCCAACAGTCATATCCAATTTAATACCTCATAATTCTGATTTGTACGATGTTCTAT AATAATTTTTTGTTTACTTTATATTGCTCCTTGTTTAGGGTTGACTATATCATAGCTCCGTTGAAGGTGTTGCAGTCTCT CAACGAATCTGTTGCTTTTCCTGATGAGAAGTACTCTTTTGTTAGGAGGCTATCCCCTGAGTCTGCTTCCCGCTACTTGT TTAGTGATGAAGAGGTATGGTTTAAGCCTCTAATTTCATTTGTCTTTCTCATTTATAATGTAGGAATTTCTTAAATGAAA CTGCTAAATTATGATATAATATTATTATAACTCCACCTTATAATTGCAAAACATAATGTCATGCCCCTTTCTAAGTCATA TCAATGGATCATCAAGAACCAATTAGGTGAAGAACAACTTCAAACTGCATGAAGTCTGTTTTGCTGGTACTCCGATAATG TATATCTGGGACAAAGACTAGGTCAGGTGCATGACAGACATTAACAAACATAAACCTCAGTTCTCGAGGAGCATCTGTTT TTGTTTGATAAACATTTGAAAGATGACATGATTACAAAGCAATGCCTTTCGTTTTTTGAGTTATCCCCCCTTATGGAACA AACCAATGTCTCTACCCTTAATTATCGGGAATGAATTCTCTCAATTGTTCAAAAAACTTGATCATGTCAAGTTTCACCAT CTAACCATTGATTTAATTTTTATTTATTTATTTGATTATTAAACACACAAAAATGAATGGTTAGATGGTTAAACTTGACA TGGTCAATTTTTTATCCGGAAGATCCATTTCCTTAATTATCATGGACTCATGGTTCTATCTATTATCTTTTTCCCTGTAT CTTCAAACACCTAGAGTTCAATATTCAGTTGCAAAACATTCTGAAACGTAACATTAGAGCTCCCTAAATATTTTGATATC ATCAATCACCTTGCTATTATATTTGCGTTTTTTTCCCAAAAAGGAAAAGGATCTATTGTGAGAAAAAAGCAATGAAGTAT TTTTAATAAACAAAATATTGTACCTATCAAGAGGTTATGGAAAACCAAATTAGTAAACTGTATCTCCCTCACTCAATGGG TGTGAAATTTTTCTCAAGTTGAGATTTCTATTAGTAACATTGACAATGTGTTGAAAATGTTAGCAGCAGTTGTCATTTAT GATGAGTTATGTCACCCTTATGTCTATGGTTCTGTTATCTTTGCTAACCTCGATAATAGATTTCATGTACATTTGAATTT CCGTTACATTCACCTAGAAGAACTTTTATTTCAATCCATTATGTGTGTTTGCATAGCAGTTGAGTTAATGTGAAGTGAGT TTTTTTTAGTGAGTGAGTGCTAACGTGTGTGTGTGTTTTCATCACAATCCATAAGAGTTTCATTCACTTTTTCTTTCAGA ATGAGTGCTAACGTCCGTTAACACTAGCACGAACATAGCCATAGGCCAGTTAATCCTTGCGAATGGAAATTCAAAGTTCA AACAAACTGATAGAATTTCTTTCATGTTCTGGTGATTGTCAGCTTTGCTAAAAACCAAATTGCTTTACTAATAAGTATGC ATTTTTCATATTCAGCTTATTAAATGGGACCAAACTAGCCTTACAGAAGCCATGGGGCCAGCAGCTGTGCAGCTTCTGGC TGCTGGACTGGATGGTTATGCTGATCAAGCAACTCGGGTGGAAGAGTACTTTCGGAAAATTTGGCCACCACCAAATGTAT AATTTGACTTCTTTATGTCGCTCGAGTAGAACTTTTGCCTGATGGAATAACAGAATGTACAACAAATGAAAGGGAATCAT CCTTCCTTTGTTTTTTTTATTTTCCCCTTTAACCTTGAACTCTTGAACAATTTCCTTCCATGTAAAGCACACGGTTCCTT AAATCTAAATCCCATCAAACTTGAGGAAGAATGGGAAAAATATCATATCCTATAATCTAAACGGATTCAAGGCATATATA TACAAGGCATTCTAAGCAAGGATAAAACTCCATAGCTTCAAGGTAGGTAGTCTTTCTTTCCTCTTATAATTTGGTGTCCT AGATTCATGCATCTACGATCATGTTATGAATGATTCATGTTTTATATATTATATGATTATATGAATCATGATGTTTAAGA TTTCTGACATTTGGTATCAGAGTTCATATGATTTAGGATCCATTTTGATGATTCAATGTGGAGAGTAATCACAAGTATTA GGGTTGCTACTCCTTGTATGAAATTATGAAGTCTACTAAATTATGTTTATTTTGTAATGCACTGTGAAGCTTATATATGT TGGGTTACCACTATGCTATAATTCATCACTACTACGCCGGTTTTTAAAAAAGGACACACAACAGTATAAGAG
CDS sequence (LotjaGi4g1v0208800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCTGTCACCTTGCAATCTCCGCCTTCAGCAGCAGCGTTCTCTTCCGCCGCTGCATCATCTTCCATTCACCGGAGGAT CCATTCCACTCCGCCGCCGACTCTACCCTTCAAATCCCAAAGGTCCTTCCCTCTCATTCGCGCTTCCTCTTCCTCCATCA ACACCGCTTCGATCACTGAATTGGATGCTGTATCTGCCTTCAGCGAGATCGTTCCAGACACTGTCATCTTCGATGATTTC CAAAAGTTTCCTCCAACTGCTGCCACTGTCAGTTCATCGCTTCTCTTGGGTATATGTGGACTTCCAGATACCGTTTTCAG GAATGCTGTGGATATGGCTTTGGCTGACTCTGAATGTAATGGGCTGCAAAATCCTGAGGCAAGACTGTCTTGTTTTGTCA ACAAGGCCTTAGTGAATGTCGGTACTGACTTGGCGAAGCTTGTCCCTGGCCGTGTTTCAACAGAAGTGGATGCTCGTCTT GCGTATGACACACATGACATAATTAGAAAGGTGCATGACCTGTTGAAGTTGTACAATGATAATAATGTTCCTCCTCAACG TCTGTTGTTTAAAATCCCCTCAACATGGCAAGGAATAGAGGCTGCAAGATTGCTGGAATCCGAAGGAATACAGACACATT TGACTTTTGTTTACAGCTTTGCTCAAGCTGCTGCTGCGGCTCAAGCTGGTGCTTCTGTTATACAAATTTTTGTTGGCCGC ATCAGGGACTGGGCACGTAATCATTCGGATGACAAAGAGATAGAATCTTCCAAGCTAAGAGGAGAAGATCCCGGGTTGAC ATTGGTTACAAAAGCTTACAATTATATTCACAAGTATGGACATAAGTCAAAGTTGATGGCAGCAGCAGTTCGCAACAAGC AGGATCTATTTAGTCTTCTGGGGGTTGACTATATCATAGCTCCGTTGAAGGTGTTGCAGTCTCTCAACGAATCTGTTGCT TTTCCTGATGAGAAGTACTCTTTTGTTAGGAGGCTATCCCCTGAGTCTGCTTCCCGCTACTTGTTTAGTGATGAAGAGCT TATTAAATGGGACCAAACTAGCCTTACAGAAGCCATGGGGCCAGCAGCTGTGCAGCTTCTGGCTGCTGGACTGGATGGTT ATGCTGATCAAGCAACTCGGGTGGAAGAGTACTTTCGGAAAATTTGGCCACCACCAAATGTATAA
Protein sequence (LotjaGi4g1v0208800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPVTLQSPPSAAAFSSAAASSSIHRRIHSTPPPTLPFKSQRSFPLIRASSSSINTASITELDAVSAFSEIVPDTVIFDDF QKFPPTAATVSSSLLLGICGLPDTVFRNAVDMALADSECNGLQNPEARLSCFVNKALVNVGTDLAKLVPGRVSTEVDARL AYDTHDIIRKVHDLLKLYNDNNVPPQRLLFKIPSTWQGIEAARLLESEGIQTHLTFVYSFAQAAAAAQAGASVIQIFVGR IRDWARNHSDDKEIESSKLRGEDPGLTLVTKAYNYIHKYGHKSKLMAAAVRNKQDLFSLLGVDYIIAPLKVLQSLNESVA FPDEKYSFVRRLSPESASRYLFSDEELIKWDQTSLTEAMGPAAVQLLAAGLDGYADQATRVEEYFRKIWPPPNV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | - | – | |
| Phobius | 1 | 2 | 2 | - | – | |
| Phobius | 3 | 14 | 12 | - | – | |
| Phobius | 15 | 19 | 5 | - | – | |
| Phobius | 20 | 394 | 375 | - | – | |
| PANTHER | 36 | 394 | 359 | 8.6E-198 | – | |
| PANTHER | 36 | 394 | 359 | 8.6E-198 | ||
| Gene3D | 58 | 389 | 332 | 7.5E-93 | ||
| CDD | 59 | 385 | 327 | 7.89299E-135 | ||
| SUPERFAMILY | 60 | 389 | 330 | 4.5E-79 | – | |
| Pfam | 113 | 328 | 216 | 1.2E-49 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity | Catalysis of the reaction: sedoheptulose 7-phosphate + D-glyceraldehyde 3-phosphate = D-erythrose 4-phosphate + D-fructose 6-phosphate. | ||
| Cellular component | Cytoplasm | All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. | ||
| Biological process | Pentose-phosphate shunt | The glucose-6-phosphate catabolic process in which, coupled to NADPH synthesis, glucose-6-P is oxidized with the formation of carbon dioxide (CO2) and ribulose 5-phosphate; ribulose 5-P then enters a series of reactions interconverting sugar phosphates. The pentose phosphate pathway is a major source of reducing equivalents for biosynthesis reactions and is also important for the conversion of hexoses to pentoses. |
Expression pattern of LotjaGi4g1v0208800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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