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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0210600 |
| Transcript ID | LotjaGi4g1v0210600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Nudix hydrolase-like protein; TAIR: AT4G11980.1 nudix hydrolase homolog 14; Swiss-Prot: sp|Q9SZ63|NUD14_ARATH Nudix hydrolase 14, chloroplastic; TrEMBL-Plants: tr|A0A0L9TQC6|A0A0L9TQC6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0210600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:49110923..49114645) extracted from Lotus japonicus Gifu genome v1.2.
GGGCCGGTTTTTAACCCATTGACCAAAGGACGTGATTCATTTCTTCTTGCTGACGCCAACGCTCAAGCTTTAAAAAATGG CTGTGTCTGTTCGCACTGTATCCGCTGCGTTGAAGCAGTTCGTACCAACCCACGCTTTCCATCGGATTTCGACGAAGAAG GTCTTCGGCTGCAAAATGTCGACCGAGTCACCGCCCTTCACTCACTCCATCACCCTGCCGAGTAAACAGTCCGAACCCTT TCACATCGTTGCTGCTCCCGGTGTCTCTCATTCTGATTTCTGGTCAGTTTCTTATTTTCATTTGATAATTTTGGTCAGAA ATTATATTATAGTAGCAAAGCTTTAGATGTAGTCATGTTTTTAGTATATTTATTTCCAATTCCAATTTGAACCAAATTCG AATTTGGAAGCTAGAAGGGTTCACTCAATTAGGTGCTAGGCATTCATATGATTTTTGTCGCTGTTGTTCGTTTGAATGTT TGTTTCATTTAGGATGTATCAAGTATGATTTTCCCCCTTGCAGGAATGCTATTGATTCCTCTTTATTCAAGCAGTGGTTG CATAACTTGCAAACTGAGAATGGGATTTTAGCTGATGGTACTATGACTCTGAGACAAGTTTTAATTCAGGTAATAAGTTC ATTGTGATAAAATCAGTCAATGAAGGTTATTTCATTGAAAAGAGGTTTTCTCTGCAGTCCATAATCCAAAGTCTTTGAAC TCATGGCAAGAAACTTATTTGATGTTGTCAATGCAGATAGTTTCTCCCTGTTTTCTTCACAGTACATAGTGCATGTTTGG AATTTGGATACATGGTAGAAACTAAAAAGTCACCGGTGAGGCCAAAATCATGGAGGACGGTAGCAAAAGCTAAGAAAAAT TGTTTCTGTCTACCGTGATTTTGACTTGACCATGGCAAGACTGTTGTTCGTATAAGACAGTTGATTTGGAATGTATAGTT ATTAGGGATTTCTTGACTATCAAGATTCAAGAATCATATTTGGACCTGTCAGATACTTCCAAGTTGGAGGCCCGCTTGAG TGTCCAGATTCAGATGACGTGGCGAGTCATTAAGACACACATAGCCTTCATACTTCAGCTATGATGTCTTGTGGACTAGT CAGATACTTCCTAATCGGAAGCCCACCTGGATTTGCAGATTCAGATGACGTGGCGAGCCATTAAGACACTTAGCCTCCAT ACTTACAGTGTGGAGGCTCTCCTAGTTGAGGCTTGTTCAACGGATCCCAGGTGGTGAGCCATCCTCCCAAGTGACGAGTC ATCCTTCCCAGTGGCGAGTGATTCCTTCATGAATGACTCGACCCTATTGGGCGAGAAATGTACTAGTTTAGAGTATATAT GTATATTCGGGCTACGTCTGTATAAGGCCCAAGTCCAAGTGAGAATTAGGGTTAGGGTTTATCTCTCCTATCATAAAAGG GAAAGATTAATTGTAATTGTGCATGTTTGCTTGATATATGCAAGGTCTATAACGTTCCATTTCCGGAAGGGTTTAAGCTT GGCTTCCGACATTGTTTACGCATCGTGAACAATATTGTTTCTGATAGTTTAGGGAACTGTTACTTGGAATTCAAGTAAAA GGATACAACACTAATATGTTTGGTGGATTTTTTGTGGTATAAAAAGGGAGTAGACATGTTTGGAAAGCGCATTGGGTTTC TCAAGTTCCAAGCTGACATTTTTGACAAAGAAACAGGGCAAAAGGTATCAGATTATTTACATAAAAAGTTTCAATGTAGA GTATTTGTTGACAATTGACATGTTTTCATGTGTTAATTACGGCAATGGGCTATGAATCAGTATGCATACAGTGATAGTCC TATCCTTCTTTTGCATTGTTGTCCTCCAATATCTAATATGGATTCCTAAACTTGGAATTTGGAAATGGTAACATTAGGAA ACATTTTTTTCATATTTGTCTTACAAGGCTTCTTGGATATATATGCATGGATATTTAGGATACCTTTGTTTGGTACAGTT GTTATGTTATATTCTGAGGAAATTGTGGCGCCTTTTGTTTGGCACCTGGCACTTAAAAATCCTAAATATCCAACAGAGAG CATTGTATGCTGTGACATGTGCGGTTCTGAAATGCTTGAAAGGGTATCACATGCACATTGTGCGTTGGAGAAGACATGCA GAATTTGATGTGGCTATGCATTTAGTGCACCTAGGGCTGATTTCTTTCTTTTTTATAGTAAGTAAACCATGATTAGATTC CAGGTATTGTGTTTGCCAGAGGACCAGCTGTGGCTGTGCTGATACTTCTGGAATCAGAGGGTGAGACGTATGTGGTTCTT ACTGATCAGGTAGATGTTGGAGCCTTGCTGTGTGCTTTTAAACAATTGTAACTGGAATTTCATGATATGTGTATTCTCAT GTTGGATATTCTTAAATATAAGCCAAGGGTTCCTGTTGGGAAAACTATTTTGGAATTGCCTGCTGGAATGTTGGACGATG ATAAGGGTGATTTTGTTGGCACTGCAGTTCGTGAGGTCTATTTCTCTCTTATTCTCACCATCTCTAGCTGGACACAAAGC ACATGTTTTACTTGCATTCCAAGTGGCTTTTTGACTTGCATGTCTGAGTTTTTAGTTGTTTTTCCTAGTGATATGACTGT CTTAACAGTAATGTTCTGGAGTTGTTTTGAGACTGACAGGCTGAAGAAGAGACCGGCATCAAGTTAAAGCTAGACGATAT GGTTGACCTCACTGCTTTTCTGGACTCTTCAACTGGATACAGAGTTTTCCCCTCTCCGGTATGCTTTGATCCTTTTGCAT GAGGACCTTTTTGCATTTTTTTCTTTCGGAAATTTTGATGATTTACGCTTTGCAGATAATCAGTGTTTTTTTTGTTTTGT TATTTGGGGTAAGGGAGGATGTGATGAAGAAATCAGCATCTTTCTGTACAGAGGAAGAGTTGATAAAGAGATAATCACAC AGCTGCAAGGTAAAGAAACTGGCCTTCGCGAACATGGGGAGCTGATTAAGGTACGTGTAGTACCATACAAGAACCTTTGG CGCTCAACAGCGGATTGCAAGGTTCTGGTGGCTGTAGCACTGTTTGAAATGGCTACCAAAGAAGGCCTGTTGCCTCTTTT GGCTACCTAACTAAAGGAGTAATAACTATCTTATTTATTTCATTATTGGGATGGCCCTATATGTTGCGTACACTTAACCA GAAAGGCTTGGTTGTTGTATCCCTTACCAAGAGATTCGCCTAATACTATGTTTTTCTTGTATATGCGAAGATTGTAGATT GAAAACAATGTTGATCAAAAGATGGTATACACAGCTGACATTGCTCGCACTTGCTATTATGCTTTTAAAGGAAATTCTTA CACCTTGATTATTACTTAAACGCCAGAATAAATGGATTATGGATGACATGCCTGTTGGATGTTAAAGTTCTTTTAATGAC AGCAACAAAGCCCAAAAATGTTTGTGCCACCTCTTTGTGAAACGTTTCCCTCAGTAAAACCAGTCGAGCGAGGCTGCAAC TTACGCCACTCTTGAGGCTCTGGTAGCCCCTAATGTGGCTATGGTCTTTTCTTCCCTGAATGATGGGCTCTGTACCCATA TATGGTGGTCATCTCCTCCATTTAATGAGAGTTTTGTTTCCTTTAAGGGCCCGTTTGGTGCGACGTATGGTATAAGGCCT AATAGTATAAGATCTGATAGTATTAGACCTGATAATATAAGCC
CDS sequence (LotjaGi4g1v0210600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGTGTCTGTTCGCACTGTATCCGCTGCGTTGAAGCAGTTCGTACCAACCCACGCTTTCCATCGGATTTCGACGAA GAAGGTCTTCGGCTGCAAAATGTCGACCGAGTCACCGCCCTTCACTCACTCCATCACCCTGCCGAGTAAACAGTCCGAAC CCTTTCACATCGTTGCTGCTCCCGGTGTCTCTCATTCTGATTTCTGGAATGCTATTGATTCCTCTTTATTCAAGCAGTGG TTGCATAACTTGCAAACTGAGAATGGGATTTTAGCTGATGGTACTATGACTCTGAGACAAGTTTTAATTCAGGGAGTAGA CATGTTTGGAAAGCGCATTGGGTTTCTCAAGTTCCAAGCTGACATTTTTGACAAAGAAACAGGGCAAAAGATTCCAGGTA TTGTGTTTGCCAGAGGACCAGCTGTGGCTGTGCTGATACTTCTGGAATCAGAGGGTGAGACGTATGTGGTTCTTACTGAT CAGCCAAGGGTTCCTGTTGGGAAAACTATTTTGGAATTGCCTGCTGGAATGTTGGACGATGATAAGGGTGATTTTGTTGG CACTGCAGTTCGTGAGGCTGAAGAAGAGACCGGCATCAAGTTAAAGCTAGACGATATGGTTGACCTCACTGCTTTTCTGG ACTCTTCAACTGGATACAGAGTTTTCCCCTCTCCGGGAGGATGTGATGAAGAAATCAGCATCTTTCTGTACAGAGGAAGA GTTGATAAAGAGATAATCACACAGCTGCAAGGTAAAGAAACTGGCCTTCGCGAACATGGGGAGCTGATTAAGGTACGTGT AGTACCATACAAGAACCTTTGGCGCTCAACAGCGGATTGCAAGGTTCTGGTGGCTGTAGCACTGTTTGAAATGGCTACCA AAGAAGGCCTGTTGCCTCTTTTGGCTACCTAA
Protein sequence (LotjaGi4g1v0210600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAVSVRTVSAALKQFVPTHAFHRISTKKVFGCKMSTESPPFTHSITLPSKQSEPFHIVAAPGVSHSDFWNAIDSSLFKQW LHNLQTENGILADGTMTLRQVLIQGVDMFGKRIGFLKFQADIFDKETGQKIPGIVFARGPAVAVLILLESEGETYVVLTD QPRVPVGKTILELPAGMLDDDKGDFVGTAVREAEEETGIKLKLDDMVDLTAFLDSSTGYRVFPSPGGCDEEISIFLYRGR VDKEIITQLQGKETGLREHGELIKVRVVPYKNLWRSTADCKVLVAVALFEMATKEGLLPLLAT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 25 | 298 | 274 | 1.9E-127 | – | |
| PANTHER | 25 | 298 | 274 | 1.9E-127 | – | |
| Gene3D | 106 | 295 | 190 | 8.4E-35 | – | |
| SUPERFAMILY | 115 | 284 | 170 | 5.69E-21 | ||
| ProSiteProfiles | 137 | 290 | 154 | 14.372 | ||
| CDD | 138 | 285 | 148 | 5.05847E-28 | – | |
| Pfam | 138 | 273 | 136 | 4.4E-15 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi4g1v0210600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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