Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR000086
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 71 results. Now displaying 1 of 2 with 50 rows per page. This search has taken 6.830s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0079109.1
n.a. PREDICTED: nudix hydrolase 17, mitochondrial-like [Glycine max] gi|356553271|ref|XP_003544981.1| chr0 30563503 30565303 +
3 domain predictions
1 GO term
Lj0g3v0105609.1
n.a. Nudix hydrolase [Medicago truncatula] gi|357476761|ref|XP_003608666.1| chr0 45338876 45341802 +
3 domain predictions
1 GO term
Lj0g3v0105609.2
n.a. Nudix hydrolase [Medicago truncatula] gi|357476761|ref|XP_003608666.1| chr0 45338876 45342335 +
3 domain predictions
1 GO term
Lj0g3v0162539.1
n.a. Nudix hydrolase [Medicago truncatula] gi|357500493|ref|XP_003620535.1| chr0 76667430 76672515 +
3 domain predictions
1 GO term
Lj0g3v0201549.1
n.a. PREDICTED: nudix hydrolase 16, mitochondrial-like [Glycine max] gi|356556803|ref|XP_003546710.1| chr0 99659165 99662899 +
3 domain predictions
1 GO term
Lj0g3v0296919.1
n.a. PREDICTED: nudix hydrolase 17, mitochondrial-like [Glycine max] gi|356502376|ref|XP_003519995.1| chr0 154248494 154250423 -
3 domain predictions
1 GO term
Lj0g3v0300239.1
n.a. PREDICTED: mRNA-decapping enzyme subunit 2-like isoform X1 [Cicer arietinum] gi|502169822|ref|XP_004514693.1| chr0 155985196 155991911 -
3 domain predictions
1 GO term
Lj0g3v0331419.2
n.a. PREDICTED: nudix hydrolase 14, chloroplastic-like [Glycine max] gi|356513721|ref|XP_003525559.1| chr0 173196761 173199689 +
3 domain predictions
1 GO term
Lj0g3v0334059.1
n.a. PREDICTED: nudix hydrolase 19, chloroplastic-like [Glycine max] gi|356514398|ref|XP_003525893.1| chr0 174841269 174849507 -
3 domain predictions
1 GO term
Lj0g3v0334059.2
n.a. PREDICTED: nudix hydrolase 19, chloroplastic-like [Glycine max] gi|356514398|ref|XP_003525893.1| chr0 174841269 174849394 -
3 domain predictions
1 GO term
Lj0g3v0357479.1
n.a. PREDICTED: nudix hydrolase 20, chloroplastic-like [Cicer arietinum] gi|502163782|ref|XP_004512948.1| chr0 188217836 188222672 +
3 domain predictions
1 GO term
Lj1g3v3930310.1
n.a. PREDICTED: nudix hydrolase 12, mitochondrial-like isoform X2 [Cicer arietinum] gi|502106928|ref|XP_004493101.1| chr1 45869358 45882371 +
3 domain predictions
1 GO term
Lj1g3v3930310.2
n.a. PREDICTED: nudix hydrolase 12, mitochondrial-like isoform X2 [Cicer arietinum] gi|502106928|ref|XP_004493101.1| chr1 45869358 45881944 +
3 domain predictions
1 GO term
Lj1g3v4327730.1
n.a. PREDICTED: nudix hydrolase 23, chloroplastic-like [Cicer arietinum] gi|502109215|ref|XP_004493593.1| chr1 50903403 50907625 +
3 domain predictions
1 GO term
Lj2g3v0125090.1
n.a. PREDICTED: nudix hydrolase 25-like [Glycine max] gi|356530740|ref|XP_003533938.1| chr2 2128021 2134433 +
3 domain predictions
1 GO term
Lj2g3v0658260.1
n.a. PREDICTED: nudix hydrolase 4 [Glycine max] gi|356531134|ref|XP_003534133.1| chr2 10578636 10580617 -
3 domain predictions
1 GO term
Lj2g3v1989220.1
n.a. PREDICTED: nudix hydrolase 8-like [Glycine max] gi|356540550|ref|XP_003538751.1| chr2 29806579 29812678 +
3 domain predictions
1 GO term
Lj2g3v1989220.2
n.a. PREDICTED: nudix hydrolase 8-like [Glycine max] gi|356540550|ref|XP_003538751.1| chr2 29806579 29812678 +
3 domain predictions
1 GO term
Lj2g3v1989220.3
n.a. PREDICTED: deSI-like protein At4g17486-like isoform X1 [Cicer arietinum] gi|502160360|ref|XP_004511719.1| chr2 29808164 29812678 +
3 domain predictions
1 GO term
Lj3g3v1907670.1
n.a. PREDICTED: nudix hydrolase 16, mitochondrial-like [Glycine max] gi|356548857|ref|XP_003542815.1| chr3 24563799 24570368 +
3 domain predictions
1 GO term
Lj3g3v3213220.3
n.a. Nudix hydrolase [Medicago truncatula] gi|357472597|ref|XP_003606583.1| chr3 39639228 39652066 +
2 domain predictions
1 GO term
Lj4g3v0109380.1
n.a. PREDICTED: nudix hydrolase 2-like [Glycine max] gi|356532784|ref|XP_003534950.1| chr4 922431 925570 +
3 domain predictions
1 GO term
Lj4g3v0496540.1
n.a. PREDICTED: nudix hydrolase 15, mitochondrial-like [Cicer arietinum] gi|502142845|ref|XP_004505126.1| chr4 8330490 8333357 +
3 domain predictions
1 GO term
Lj4g3v0496540.2
n.a. PREDICTED: nudix hydrolase 15, mitochondrial-like isoform 1 [Glycine max] gi|356548635|ref|XP_003542706.1| chr4 8330490 8333896 +
3 domain predictions
1 GO term
Lj4g3v1865760.1
n.a. Nudix hydrolase [Medicago truncatula] gi|357477993|ref|XP_003609282.1| chr4 25696555 25702539 +
3 domain predictions
1 GO term
Lj4g3v1865760.3
n.a. Nudix hydrolase [Medicago truncatula] gi|357477993|ref|XP_003609282.1| chr4 25696555 25704238 +
3 domain predictions
1 GO term
Lj4g3v3113010.1
n.a. PREDICTED: nudix hydrolase 17, mitochondrial-like [Glycine max] gi|356513062|ref|XP_003525233.1| chr4 41502820 41504507 -
3 domain predictions
1 GO term
Lj5g3v1697790.1
n.a. PREDICTED: nudix hydrolase 26, chloroplastic-like isoform X2 [Cicer arietinum] gi|502118121|ref|XP_004496111.1| chr5 24389725 24392300 -
3 domain predictions
1 GO term
Lj5g3v2013890.1
n.a. PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation specificity factor subunit 5-like [Glycine max] gi|356535879|ref|XP_003536470.1| chr5 28402358 28406417 -
2 domain predictions
1 GO term
Lj6g3v0214770.1
n.a. PREDICTED: nudix hydrolase 2-like [Cicer arietinum] gi|502134634|ref|XP_004502189.1| chr6 2176898 2181842 -
3 domain predictions
1 GO term
Lj6g3v0340630.1
n.a. PREDICTED: nudix hydrolase 4 [Glycine max] gi|356531134|ref|XP_003534133.1| chr6 3301358 3302767 -
3 domain predictions
1 GO term
Lj6g3v0410600.1
n.a. Nudix hydrolase [Medicago truncatula] gi|357460851|ref|XP_003600707.1| chr6 3857274 3859194 +
3 domain predictions
1 GO term
Lj6g3v0739980.1
n.a. PREDICTED: nudix hydrolase 2-like [Glycine max] gi|356524366|ref|XP_003530800.1| chr6 6986954 6990723 +
3 domain predictions
1 GO term
Lj6g3v1008150.1
n.a. PREDICTED: nudix hydrolase 3-like [Cicer arietinum] gi|502126785|ref|XP_004499436.1| chr6 11089833 11105257 -
3 domain predictions
1 GO term
Lj6g3v2006030.1
n.a. Nudix hydrolase [Medicago truncatula] gi|357446879|ref|XP_003593715.1| chr6 23339998 23342263 -
3 domain predictions
1 GO term
LotjaGi1g1v0005100.1
n.a. Nudix family hydrolase; TAIR: AT5G47650.1 nudix hydrolase homolog 2; Swiss-Prot: sp|Q94B74|NUDT2_ARATH Nudix hydrolase 2; TrEMBL-Plants: tr|I1M666|I1M666_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0005100 LjG1.1_chr1 843965 848442 -
3 domain predictions
1 GO term
LotjaGi1g1v0095300.1
n.a. Nudix hydrolase-like protein; TAIR: AT2G01670.1 nudix hydrolase homolog 17; Swiss-Prot: sp|Q9ZU95|NUD17_ARATH Nudix hydrolase 17, mitochondrial; TrEMBL-Plants: tr|A0A151RI97|A0A151RI97_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0095300 LjG1.1_chr1 14429471 14431379 -
3 domain predictions
1 GO term
LotjaGi1g1v0200500.1
n.a. Nudix family hydrolase; TAIR: AT5G20070.1 nudix hydrolase homolog 19; Swiss-Prot: sp|Q94A82|NUD19_ARATH Nudix hydrolase 19, chloroplastic; TrEMBL-Plants: tr|A0A151UGE9|A0A151UGE9_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0200500 LjG1.1_chr1 42412841 42425199 -
3 domain predictions
1 GO term
LotjaGi1g1v0485600.1
n.a. Isopentenyl-diphosphate delta-isomerase; TAIR: AT3G02780.1 isopentenyl pyrophosphate:dimethylallyl pyrophosphate isomerase 2; Swiss-Prot: sp|O48965|IDI2_CAMAC Isopentenyl-diphosphate Delta-isomerase II; TrEMBL-Plants: tr|A0A0S3RSE2|A0A0S3RSE2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0485600 LjG1.1_chr1 99877346 99881625 -
3 domain predictions
1 GO term
LotjaGi1g1v0636000.1
n.a. Nudix hydrolase-like protein; TAIR: AT1G12880.1 nudix hydrolase homolog 12; Swiss-Prot: sp|Q93ZY7|NUD12_ARATH Nudix hydrolase 12, mitochondrial; TrEMBL-Plants: tr|I3T351|I3T351_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0636000 LjG1.1_chr1 119105250 119110995 +
3 domain predictions
1 GO term
LotjaGi1g1v0726600.1
n.a. Nudix hydrolase-like protein; TAIR: AT2G42070.1 nudix hydrolase homolog 23; Swiss-Prot: sp|P93740|NUD23_ARATH Nudix hydrolase 23, chloroplastic; TrEMBL-Plants: tr|I3SGQ4|I3SGQ4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0726600 LjG1.1_chr1 129753362 129759426 +
3 domain predictions
1 GO term
LotjaGi1g1v0726600.2
n.a. Nudix hydrolase-like protein; TAIR: AT2G42070.1 nudix hydrolase homolog 23; Swiss-Prot: sp|P93740|NUD23_ARATH Nudix hydrolase 23, chloroplastic; TrEMBL-Plants: tr|I3SGQ4|I3SGQ4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0726600 LjG1.1_chr1 129755062 129759393 +
3 domain predictions
1 GO term
LotjaGi2g1v0063200.1
n.a. RNA pyrophosphohydrolase; TAIR: AT1G30110.1 nudix hydrolase homolog 25; Swiss-Prot: sp|Q9C6Z2|NUD25_ARATH Nudix hydrolase 25; TrEMBL-Plants: tr|I3T716|I3T716_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0063200 LjG1.1_chr2 14662690 14668617 -
3 domain predictions
1 GO term
LotjaGi2g1v0070200.1
n.a. Nudix hydrolase-like protein; TAIR: AT2G01670.1 nudix hydrolase homolog 17; Swiss-Prot: sp|Q9ZU95|NUD17_ARATH Nudix hydrolase 17, mitochondrial; TrEMBL-Plants: tr|A0A151QZU3|A0A151QZU3_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0070200 LjG1.1_chr2 17148166 17150262 +
3 domain predictions
1 GO term
LotjaGi2g1v0119900.1
n.a. mRNA decapping protein 2; TAIR: AT5G13570.1 decapping 2; Swiss-Prot: sp|Q8GW31|DCP2_ARATH mRNA-decapping enzyme subunit 2; TrEMBL-Plants: tr|A0A0L9TCG1|A0A0L9TCG1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0119900 LjG1.1_chr2 44190112 44198289 -
3 domain predictions
1 GO term
LotjaGi2g1v0119900.3
n.a. mRNA decapping protein 2; TAIR: AT5G13570.1 decapping 2; Swiss-Prot: sp|Q8GW31|DCP2_ARATH mRNA-decapping enzyme subunit 2; TrEMBL-Plants: tr|A0A0L9TCG1|A0A0L9TCG1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0119900 LjG1.1_chr2 44191446 44197399 -
3 domain predictions
1 GO term
LotjaGi2g1v0119900.5
n.a. mRNA decapping protein 2; TAIR: AT5G13570.1 decapping 2; Swiss-Prot: sp|Q8GW31|DCP2_ARATH mRNA-decapping enzyme subunit 2; TrEMBL-Plants: tr|C6TF29|C6TF29_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi2g1v0119900 LjG1.1_chr2 44192663 44197399 -
3 domain predictions
1 GO term
LotjaGi2g1v0193100.1
n.a. Nudix hydrolase-like protein; TAIR: AT1G18300.1 nudix hydrolase homolog 4; Swiss-Prot: sp|Q9LE73|NUDT4_ARATH Nudix hydrolase 4; TrEMBL-Plants: tr|I3SE70|I3SE70_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0193100 LjG1.1_chr2 62542306 62544313 -
3 domain predictions
1 GO term
LotjaGi2g1v0193100.2
n.a. Nudix hydrolase-like protein; TAIR: AT1G18300.1 nudix hydrolase homolog 4; Swiss-Prot: sp|Q9LE73|NUDT4_ARATH Nudix hydrolase 4; TrEMBL-Plants: tr|I3SE70|I3SE70_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0193100 LjG1.1_chr2 62542325 62544260 -
3 domain predictions
1 GO term
LotjaGi2g1v0212300.1
n.a. Nudix hydrolase 20; TAIR: AT5G19460.1 nudix hydrolase homolog 20; Swiss-Prot: sp|Q8VXZ0|NUD20_ARATH Nudix hydrolase 20, chloroplastic; TrEMBL-Plants: tr|A0A0S3TCF3|A0A0S3TCF3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0212300 LjG1.1_chr2 66060731 66067617 +
3 domain predictions
1 GO term