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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0211700 |
| Transcript ID | LotjaGi4g1v0211700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | S-type anion channel; TAIR: AT1G12480.1 C4-dicarboxylate transporter/malic acid transport protein; Swiss-Prot: sp|Q9LD83|SLAC1_ARATH Guard cell S-type anion channel SLAC1; TrEMBL-Plants: tr|G7JK66|G7JK66_MEDTR C4-dicarboxylate transporter/malic acid protein; Found in the gene: LotjaGi4g1v0211700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:49269405..49273334) extracted from Lotus japonicus Gifu genome v1.2.
CTGCACTCACTTTTCTCTCTAAAGCAGTGGTTTCCATTTCATCTTCTAAAAAAGAAGCCACCTCTTCACTTCCCGTGAGG TATCCCTCACATAAAAAACACATCAACTCAAGATTAATAGTTTCACTTGCTATTTTCCATTGAGCTTGTTGAATTCTGCT CAGCATTTTCAATAGAGAATGGAGAAGAAACCCACCACTTTAAACTCTTTCCAAACTCATTTTGTGGACATACATGAAAC CTTACCTGAAGGAGACGAAGAGAGGATAATAAAGGAGGAGAATGAAGTGGAGGAGCAGTTGAATAAAGCCACCAAATTTC GAGAAACGAAAAGAGGTAATAGAAGTTTGAACAGGCAAGTTTCACTTGAGACAGGATTTTCGGTTCTGAACAGAGAAAGG AAAGGCAGAGATGAGAGGAAGACTCTGACCAGAAGTGGGACAAGCTTGGGTTCTGCACATAGGATTGGTTTGGAAGGACA GAAAGGAGATTTCAGCATCTTCAAGACGAAATCCACTCTCAGCAAGCAGAACTCTCTGTTGCCAAGAAAAGAGAAAGATT TGGATTCCCAGAGGATCAATGGCTCTGGGGTGGATGATGATGAGTCTGTTAATACAAGTGTTCCAGCTGGTAGGTACTTT GCTGCTCTTAGAGGACCTGAGTTAGACGAAGTCAAGGTAAGACATAGCTTTTAACTTAACTTCAAGTTGCTTAAGCATCA ATGCACCAACCATTTAAGTTTTTGAGATAGTTAGTCTACATGCTCTCCATTTCTAAACTTCTATGACAAAGAGATCTGAA TTTAATTCATAATATGGTCTCCATTTCTAATCAAAAGTTGAATTTTAGCACAACTGAGATGCATTTGTTCATTGTCCATA TAAGATTTTTGCGTGTAGAGATGTCAAAAACATAATATTAAATCATTCACATATCTTTCATAGTAGCTTAAACTTTTAGA ATAGTCAACTTATGACATACTAACTAACTACACATATTGTCTTATCAATTTCTAATTCACGTATGACATGTACATATTTT ATAGTACAAACACTCACACACACACCTAGTTTTTCGTTATATCTCTTCTTTATATTCTCTTTTTTTCGCATCATGAGTGT CTACACTTATTAAGTGTCTACCCAACATTTTCCTTTTCCGTTCCTTCATAAGATCTTCCTATGTTCCTTACTCTGAAAGT TTGGAATTGGAAATCAACATCACAGCAGACACCCTAAACTGGTTTATGTCGGGGTGTTTGCTACTATTTTTGATGTTGTA ATTTTATTTTTTGGGGTTCTTAGTTTATCTTTTTCTTTGTATTAAGTTGAAGTACCCGTTGTACTTCATATCAATAAATA TAAATCATGGCTTATCTAAAAAAAACGATCATAAAAGCATGGCATATTAAAAGGTGAATAGTGAATGTCATTAAATACTT TTATATGATCAATATTGATTATTGTACACATTTGATACAGGAATCCGAGGATATTCTTCTGCCCAAAGATGAAACATGGC CTTTTCTCCTTCGGTTTCCCATAGGATGCTTTGGTATCTGTCTTGGTCTAAGCAGCCAAGCGGTTCTGTGGCGAGCCATG GCAACAAGCCCCGCCACAAAATTCCTCCATGTCACCCCAGCAATCAATTTCTTCCTCTGGTTTTTAGCCTTAGCAGTGCT AATCGCAGTTTCCATCACCTACATTCTCAAATGCATATTCTACTTTGAAGCAGTGAGAAGAGAGTACTTTCACCCAGTTC GTATCAACTTCTTCTTCGCCCCATGGGTTATCTGCATGTTCTTGGCCATCGCCGCACCTCCGAAACTAGCCCCGGAAAAA CTTCACCCTTCCATTTGGTGCGTTTTCATGGCACCTTACTTTGCTCTCGAACTCAAAATCTATGGCCAGTGGCTTTCTGG AGGCAAGAGGCGTCTGTGTCAGGTTGCAAATCCCTCTAACCATCTTTCTGTGTCTGGAAACTTTGTCGGCGCAATCTTGG CTTCAAAAGTGGGTTGGAAGGAACCTGCAAAGTTCTTTTGGGCTGTTGGTTTTGCACATTACCTGGTTGTGTTTGTGACT CTGTATCAGAGGTTGCCAACAAATGTGTCACTCCCCAAGGAGCTTCACCCTGTGTACTCCATGTTCATTGCTGCACCCTC AGCGGCATGTCTTGCTTGGGGGAGTATCTATGGTGAATTTGATGGCTTGTCCAGAACTTGCTACTTCATCGCCTTGTTTC TCTATGCTTCGCTTGTCGTTCGGATCAATTTCTTCACTGGTTTCAGGTACAATAATTTCCCAAAAATGATTGTTGAACAC TAAATTTCTGTCAGCACTCCCGACTCTAGCTATGTACGTAAGTGTTGCGGGTGTTGCGAGATATCAGATGTCTACCAATT GGGGGACTGATATTTTCTCTACTATTGGGATTTGGGAAGCCTAACTCTAAACTCAGAAGCTAGTTTAAATGTGAGAGTTG TTCTATCTTTTATAATAACTATTTTGATTATATCTCTAGTCAATATGAGACATCCAACACACTTCCACTTGCCCTAGTTT CAACATCTAGAGTGTGGAATTTGCAGGACTGAAAATTTGTAAGGTGGTCTATAAATGAGAAGTCTCTCACAAACGGTTCT AGGATAGGTTCTCATACCATATTAGAATTTTGGAGGTATAACTCATGTTGTAATATGGTATGAGAGCATATCATAGATGT TTATTGGATATCACTCATATTTGGGTCACCCGTTGATGTTTATTACTGCAAAATCACATGTCTCAGATGTCCAATCATAG GCATGAGAGAGTGTGTTGAGAAGTCTCATATTGACTAGAAATATGATCAAAATAGCTTTTATATATGAAGAGACAATCTT CACCTCTAAGCTAACTTTTGAGGTACACTTAGGCCTCTCAAATTTTAATACAAGCAATCATTGACAATTTAGTTGAATAT CAATCAAATTACTAATAAGTCTTTCACTATGGACAGGTTTTCAGTTGCTTGGTGGTCTTACACGTTTCCTATGACAACCG TGTCTGTGGCAACCATCAAGTATGCAGAGCAGGTTCCTTGCGTTATAAGTCAAGGCCTTGCTCTTGTGCTTGCATTTATG TCAACAACGATGGTGTGTGTTTTGTTTGTGTCGACTCTGCTTCATGCTTTCGTTTGGCACACTTTGTTTCCAAATGATCT TGCTATTGCAATAACTAAGAGGAGGCATGGTAGCAGAGAGAAGAAGCCTTTGAAGAAGGCCTATGACATAAAGCGCTGGA CAAAGAGAGCTCTGGGCAAGAACAACCCAGTGAATAAGGATACCAGTGAAGAGTGATATGGTGTAGAATCAATAGCAGCC AAGTTCTCTGTTGACCCACAATTAAATTTCTGATGTGGGATTAATCAAGGAGTTATTAGTTTGAGCAACTTATACTTTCA AAGGTGGTTTTTTTGTTAAAAATAAAATAGATTGCCTCTTTCATATTAGTATATTACCTAACTGCGCCTAACTACTGGTA GCTGTTTCATTTGCTAGATTACCCTGTCTAGGAACTAGTAAAAGAGGTGAGTGATACCCACCTATATATTTCTCCTTTAG TTGAAGATTTAAGAATATGTTCAAATCTCTAATTATAGTGTTCGGTTTGACTAACTTGTGGTTGAGGCATTTACCCTTAG TGAAATTATCAGGGATAACTTCAAGATAATGACTATACTTGGACAACCTTGAGATATCTAGTCATGCCGGTTCTTATTAG AAATAACAATATGGGCCCGTTTGGTGGTCAGGATAGGATATGAGGATAGGATATGATATGTGAACAGGATATCAACATGA TAGGATAAGAGCAGTATAGACTCTTATTATATCCTGTGTTTGAGGTGCACATGATAAGAACAGGATATGATAAGGAAAAA TGTATCAGAT
CDS sequence (LotjaGi4g1v0211700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAAGAAACCCACCACTTTAAACTCTTTCCAAACTCATTTTGTGGACATACATGAAACCTTACCTGAAGGAGACGA AGAGAGGATAATAAAGGAGGAGAATGAAGTGGAGGAGCAGTTGAATAAAGCCACCAAATTTCGAGAAACGAAAAGAGGTA ATAGAAGTTTGAACAGGCAAGTTTCACTTGAGACAGGATTTTCGGTTCTGAACAGAGAAAGGAAAGGCAGAGATGAGAGG AAGACTCTGACCAGAAGTGGGACAAGCTTGGGTTCTGCACATAGGATTGGTTTGGAAGGACAGAAAGGAGATTTCAGCAT CTTCAAGACGAAATCCACTCTCAGCAAGCAGAACTCTCTGTTGCCAAGAAAAGAGAAAGATTTGGATTCCCAGAGGATCA ATGGCTCTGGGGTGGATGATGATGAGTCTGTTAATACAAGTGTTCCAGCTGGTAGGTACTTTGCTGCTCTTAGAGGACCT GAGTTAGACGAAGTCAAGGAATCCGAGGATATTCTTCTGCCCAAAGATGAAACATGGCCTTTTCTCCTTCGGTTTCCCAT AGGATGCTTTGGTATCTGTCTTGGTCTAAGCAGCCAAGCGGTTCTGTGGCGAGCCATGGCAACAAGCCCCGCCACAAAAT TCCTCCATGTCACCCCAGCAATCAATTTCTTCCTCTGGTTTTTAGCCTTAGCAGTGCTAATCGCAGTTTCCATCACCTAC ATTCTCAAATGCATATTCTACTTTGAAGCAGTGAGAAGAGAGTACTTTCACCCAGTTCGTATCAACTTCTTCTTCGCCCC ATGGGTTATCTGCATGTTCTTGGCCATCGCCGCACCTCCGAAACTAGCCCCGGAAAAACTTCACCCTTCCATTTGGTGCG TTTTCATGGCACCTTACTTTGCTCTCGAACTCAAAATCTATGGCCAGTGGCTTTCTGGAGGCAAGAGGCGTCTGTGTCAG GTTGCAAATCCCTCTAACCATCTTTCTGTGTCTGGAAACTTTGTCGGCGCAATCTTGGCTTCAAAAGTGGGTTGGAAGGA ACCTGCAAAGTTCTTTTGGGCTGTTGGTTTTGCACATTACCTGGTTGTGTTTGTGACTCTGTATCAGAGGTTGCCAACAA ATGTGTCACTCCCCAAGGAGCTTCACCCTGTGTACTCCATGTTCATTGCTGCACCCTCAGCGGCATGTCTTGCTTGGGGG AGTATCTATGGTGAATTTGATGGCTTGTCCAGAACTTGCTACTTCATCGCCTTGTTTCTCTATGCTTCGCTTGTCGTTCG GATCAATTTCTTCACTGGTTTCAGGTTTTCAGTTGCTTGGTGGTCTTACACGTTTCCTATGACAACCGTGTCTGTGGCAA CCATCAAGTATGCAGAGCAGGTTCCTTGCGTTATAAGTCAAGGCCTTGCTCTTGTGCTTGCATTTATGTCAACAACGATG GTGTGTGTTTTGTTTGTGTCGACTCTGCTTCATGCTTTCGTTTGGCACACTTTGTTTCCAAATGATCTTGCTATTGCAAT AACTAAGAGGAGGCATGGTAGCAGAGAGAAGAAGCCTTTGAAGAAGGCCTATGACATAAAGCGCTGGACAAAGAGAGCTC TGGGCAAGAACAACCCAGTGAATAAGGATACCAGTGAAGAGTGA
Protein sequence (LotjaGi4g1v0211700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEKKPTTLNSFQTHFVDIHETLPEGDEERIIKEENEVEEQLNKATKFRETKRGNRSLNRQVSLETGFSVLNRERKGRDER KTLTRSGTSLGSAHRIGLEGQKGDFSIFKTKSTLSKQNSLLPRKEKDLDSQRINGSGVDDDESVNTSVPAGRYFAALRGP ELDEVKESEDILLPKDETWPFLLRFPIGCFGICLGLSSQAVLWRAMATSPATKFLHVTPAINFFLWFLALAVLIAVSITY ILKCIFYFEAVRREYFHPVRINFFFAPWVICMFLAIAAPPKLAPEKLHPSIWCVFMAPYFALELKIYGQWLSGGKRRLCQ VANPSNHLSVSGNFVGAILASKVGWKEPAKFFWAVGFAHYLVVFVTLYQRLPTNVSLPKELHPVYSMFIAAPSAACLAWG SIYGEFDGLSRTCYFIALFLYASLVVRINFFTGFRFSVAWWSYTFPMTTVSVATIKYAEQVPCVISQGLALVLAFMSTTM VCVLFVSTLLHAFVWHTLFPNDLAIAITKRRHGSREKKPLKKAYDIKRWTKRALGKNNPVNKDTSEE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 180 | 180 | - | – | |
| PANTHER | 7 | 535 | 529 | 4.6E-276 | – | |
| PANTHER | 7 | 535 | 529 | 4.6E-276 | ||
| Coils | 30 | 50 | 21 | - | – | |
| MobiDBLite | 68 | 94 | 27 | - | – | |
| MobiDBLite | 70 | 84 | 15 | - | – | |
| MobiDBLite | 118 | 144 | 27 | - | – | |
| MobiDBLite | 120 | 136 | 17 | - | – | |
| Gene3D | 178 | 499 | 322 | 8.4E-93 | ||
| TMHMM | 181 | 203 | 23 | - | – | |
| Phobius | 181 | 203 | 23 | - | – | |
| CDD | 184 | 488 | 305 | 1.24842E-114 | – | |
| Pfam | 185 | 489 | 305 | 1.0E-44 | ||
| Phobius | 204 | 222 | 19 | - | – | |
| TMHMM | 223 | 245 | 23 | - | – | |
| Phobius | 223 | 247 | 25 | - | – | |
| Phobius | 248 | 258 | 11 | - | – | |
| TMHMM | 258 | 280 | 23 | - | – | |
| Phobius | 259 | 277 | 19 | - | – | |
| Phobius | 278 | 288 | 11 | - | – | |
| Phobius | 289 | 307 | 19 | - | – | |
| Phobius | 308 | 350 | 43 | - | – | |
| TMHMM | 351 | 368 | 18 | - | – | |
| Phobius | 351 | 371 | 21 | - | – | |
| Phobius | 372 | 382 | 11 | - | – | |
| TMHMM | 381 | 403 | 23 | - | – | |
| Phobius | 383 | 402 | 20 | - | – | |
| Phobius | 403 | 413 | 11 | - | – | |
| TMHMM | 413 | 431 | 19 | - | – | |
| Phobius | 414 | 434 | 21 | - | – | |
| Phobius | 435 | 439 | 5 | - | – | |
| TMHMM | 436 | 458 | 23 | - | – | |
| Phobius | 440 | 458 | 19 | - | – | |
| Phobius | 459 | 469 | 11 | - | – | |
| Phobius | 470 | 494 | 25 | - | – | |
| TMHMM | 473 | 495 | 23 | - | – | |
| Phobius | 495 | 547 | 53 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cellular ion homeostasis | Any process involved in the maintenance of an internal steady state of ions at the level of a cell. | ||
| Molecular function | Voltage-gated anion channel activity | Enables the transmembrane transfer of an anion by a voltage-gated channel. An anion is a negatively charged ion. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi4g1v0211700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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