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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0227400 |
| Transcript ID | LotjaGi4g1v0227400.5 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein kinase; TAIR: AT4G24740.1 LAMMER-type protein kinase AFC2; Swiss-Prot: sp|P51567|AFC2_ARATH Serine/threonine-protein kinase AFC2; TrEMBL-Plants: tr|A0A151TE71|A0A151TE71_CAJCA Serine/threonine-protein kinase AFC2; Found in the gene: LotjaGi4g1v0227400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:53735556..53738407) extracted from Lotus japonicus Gifu genome v1.2.
TTTGTGTGTATGTTCTTGATGATTAATTTTGTGTGTGCTAGAATATGCTTATTCATTGCACTCATGTGCTTTTATTAATT GTAAGTTTGTAACAAATTGAGATGGTAGAGAGGGCCTTGGTAGGGCTCATGATAGTGGGGTAGAATATTGTTTTTTATTT TTAACCGAGTGGTGCATGAATGGATATGGCTGTGTGTAGGCTCAGGTAGGATTGTTTTGTGGACAAGAGGTTGGGAATAT TTCTGGCTATGCTCCTTCAAGGGGTCCATCCGAACATACCAATAGTTCTCTATTTGCTAAGGGAGTTGCTCGAAATGGTT CTCCCCCTTGGCGAGATGATGACAAAGATGGGCATTACATGTTTGCAGTTGGAGAAAATTTAACATCTCGCTGTAATTAC ACTTTACCATCATTGAGATATTTATATTCTTATATGTTATGGCCAAACACTGGTTTATTCTTTCCTGATAAACCTGCAAT TATTTGCTTGCAAAACTCATGCATCTTCACTCGCTTAATTTTGTTAATTTGGGTGTAACACATTAAGTGATCCATCTCAG TTGTAGGAATTTTATTACAGAAGCTTATTTTATGTGTCCATAGGTATAAAATCATTTGGATATTGGCAAGGCTTGCATTG CTTACACGTGTTCTTTATAATGTTGCAGATAAGATCCATTGCAAAATGGGTGAAGGAACCTTTGGACAGGTCTTAGAATG CTGGGACAGAGAAAGGAAGGAAATGGTTGCCATTAAAATTGTTCGTGGTATAAAGAAATATCGAGAGGCCGCCATGATAG AAATTGAGATGTTGCAACAGCTTGGGAAACATGACAAAGGAGGCAGCCGGTAAGAGAAGTTTTAGCTTTATTTTACTAGT ACTATGTAAAAAACTTTTATTTCCATTGCATTGGTTAAATTTGCTTATTCCTTGCAGTTGTGTTCAAATACGGAACTGGT TTGACTATCGTAATCATATCTGTATTGTAAGTATTTGATTGATTTGAGATGGATTGATTTCCCCAATATACAAATAACGT GGGGGTTAAAGTATCGGTGAATTTAAATGGTTTTAACAGGTGTTTGAGAAACTTGGACCAAGCTTATACGATTTTCTTCG GAAAAACAATTATCGCTCATTTCCCATTGATCTTGTCCGTGAGATTGGCAGACAACTATTGGAATGTATTGCATGTGTGT AGTATTACTTGAACTAGTTTCCTTTAAGCCATTTCTTCTATATATTTCACTTTATATCATGTAAATTATGCTATCATAAG CTGATAATATTGCACACCATCTCATTTGCATCACATCTTTAGGAGTTAGTTTTGATATAATAAAATCATCAGCATGTGTT GTTTTTGTCACTGGGGTAGCTTCTAATTGTTTTCTTCATTTGTAAATCTGCAGTCATGCATGACTTGTGCATGATCCATA CTGACCTGAAGCCTGAGAACATACTGCTAGTTTCACCAGATTATGTCAAAGTTCCTGACTACAAGGTATGTTTCCTGTTT GCACATGTGGCTATTTGTTTTATAGACTCGTGCACTCTTTGTTTTTATAATTTTTCCTACTCATGGTGCACCTGTGATAC AGGTGAGAAGAGAAAAATCTTAAATTCTAGACACATGTCTGTTTTATGTCTGTTAAGAGAATGTAATTGACATTCAAACT GCACTATATAAAATACTAATTTGAAATAAAAGTTTCTGTTATCAGTGGTTGTTGGTAGTTTTTTTTATGACCATTGTCTC CTTTTTTCTTATTCGCAGAACACACTTAGGATCATGTTTGTGTCCTTTATTTTTTAGTTTGTTTTGATGTGAGAAGTAAA AATTAAACCAATATGTAGCATTGCTCCTTTTTTTTTCGAAGGCATTTATTGATTCAGTTTCTGACATTCATTTTCTTGTT GAACAGAATTCATCTAGATCACCAAATTCCTATTTCAAGAGAGTGCCCAAGTCAAGTGCTATAAAGGTTATTGACTTTGG CAGTACCACTTATAAGCGAGAAGATCAAAGTTACATTGTATCAACTCGTCATTATAGAGCACCTGAAGTCATCCTTGGTA TATACAAATTCTATGGAAAGAAAAGCTACATTCTAGTTTCATGATGAATTATATGATACTGGAAATATCAACTGTATTGT TGATTTTGGCAATGGTTGTGTAGGACTTGGCTGGAGTTATCCATGTGATACATGGAGCGTGGGATGTATACTGGTTGAAC TATGCACGGTATTTTTTACTCTTAGAAAACCTTGTCTCAGCACACTCATCCAACTTTTGAAGTTCTGACCTGTGAGCATC TGTTGTAGGGCGAAGCTTTGTTTCAGACTCATGAGAATTTAGAGCACCTTGCCATGATGGAGAGGGTACTTGGTCCATTA CCGCAGCACATGTTGAAGAGAGTCGAGTGAGTAACTTACGATTGGAACTTGTATCAATTTGTTGATTTTCAAACATGACA AATGAGTATGTATTTGCTTGTGCATGTTCAGCCGACATTCTGAGAAATATGTTAGAAGGGGTAGATTAGACTGGCCTGAG GGCGCGACCTCAAGGGATAGTATTAAAGCTGTAACAAAGCTTCCCAGGCTACAGGTTTGTTTAGTTACTTTTTGCTTCTT GATTTACAGCATAAAACAAGTTAAATGGTTTTTATTGACTTTTCTTTGTAATTTTTGTCAAACAGAACCTTATAATGCAG CATGTTGATCATTCAGCTGGTGATCTCATACATCTCTTGCAAGGGTTACTTAGATATGACCCCTCTGAGAGACTTACAGC TAAGGAAGCTCTGAATCATTCTTTCTTCATGAGAGATAATCTTCGGAGATAA
CDS sequence (LotjaGi4g1v0227400.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTCTTGATGATTAATTTTGTGTGTGCTAGAGCTCAGGTAGGATTGTTTTGTGGACAAGAGGTTGGGAATATTTCTGG CTATGCTCCTTCAAGGGGTCCATCCGAACATACCAATAGTTCTCTATTTGCTAAGGGAGTTGCTCGAAATGGTTCTCCCC CTTGGCGAGATGATGACAAAGATGGGCATTACATGTTTGCAGTTGGAGAAAATTTAACATCTCGCTATAAGATCCATTGC AAAATGGGTGAAGGAACCTTTGGACAGGTCTTAGAATGCTGGGACAGAGAAAGGAAGGAAATGGTTGCCATTAAAATTGT TCGTGGTATAAAGAAATATCGAGAGGCCGCCATGATAGAAATTGAGATGTTGCAACAGCTTGGGAAACATGACAAAGGAG GCAGCCGTTGTGTTCAAATACGGAACTGGTTTGACTATCGTAATCATATCTGTATTGTGTTTGAGAAACTTGGACCAAGC TTATACGATTTTCTTCGGAAAAACAATTATCGCTCATTTCCCATTGATCTTGTCCGTGAGATTGGCAGACAACTATTGGA ATGTATTGCATTCATGCATGACTTGTGCATGATCCATACTGACCTGAAGCCTGAGAACATACTGCTAGTTTCACCAGATT ATGTCAAAGTTCCTGACTACAAGAATTCATCTAGATCACCAAATTCCTATTTCAAGAGAGTGCCCAAGTCAAGTGCTATA AAGGTTATTGACTTTGGCAGTACCACTTATAAGCGAGAAGATCAAAGTTACATTGTATCAACTCGTCATTATAGAGCACC TGAAGTCATCCTTGGACTTGGCTGGAGTTATCCATGTGATACATGGAGCGTGGGATGTATACTGGTTGAACTATGCACGG GCGAAGCTTTGTTTCAGACTCATGAGAATTTAGAGCACCTTGCCATGATGGAGAGGGTACTTGGTCCATTACCGCAGCAC ATGTTGAAGAGAGTCGACCGACATTCTGAGAAATATGTTAGAAGGGGTAGATTAGACTGGCCTGAGGGCGCGACCTCAAG GGATAGTATTAAAGCTGTAACAAAGCTTCCCAGGCTACAGAACCTTATAATGCAGCATGTTGATCATTCAGCTGGTGATC TCATACATCTCTTGCAAGGGTTACTTAGATATGACCCCTCTGAGAGACTTACAGCTAAGGAAGCTCTGAATCATTCTTTC TTCATGAGAGATAATCTTCGGAGATAA
Protein sequence (LotjaGi4g1v0227400.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFLMINFVCARAQVGLFCGQEVGNISGYAPSRGPSEHTNSSLFAKGVARNGSPPWRDDDKDGHYMFAVGENLTSRYKIHC KMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEMLQQLGKHDKGGSRCVQIRNWFDYRNHICIVFEKLGPS LYDFLRKNNYRSFPIDLVREIGRQLLECIAFMHDLCMIHTDLKPENILLVSPDYVKVPDYKNSSRSPNSYFKRVPKSSAI KVIDFGSTTYKREDQSYIVSTRHYRAPEVILGLGWSYPCDTWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQH MLKRVDRHSEKYVRRGRLDWPEGATSRDSIKAVTKLPRLQNLIMQHVDHSAGDLIHLLQGLLRYDPSERLTAKEALNHSF FMRDNLRR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 12 | 12 | - | – | |
| PANTHER | 10 | 406 | 397 | 4.8E-260 | – | |
| PANTHER | 10 | 406 | 397 | 4.8E-260 | – | |
| SUPERFAMILY | 63 | 404 | 342 | 6.54E-78 | ||
| CDD | 63 | 401 | 339 | 0.0 | – | |
| Gene3D | 68 | 156 | 89 | 5.4E-112 | – | |
| ProSiteProfiles | 76 | 401 | 326 | 36.428 | ||
| Pfam | 76 | 401 | 326 | 1.3E-49 | ||
| SMART | 76 | 401 | 326 | 2.2E-74 | ||
| Gene3D | 130 | 400 | 271 | 5.4E-112 | – | |
| ProSitePatterns | 197 | 209 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi4g1v0227400.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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