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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0227400 |
| Transcript ID | LotjaGi4g1v0227400.7 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein kinase; TAIR: AT4G24740.10 LAMMER-type protein kinase AFC2; Swiss-Prot: sp|P51567|AFC2_ARATH Serine/threonine-protein kinase AFC2; TrEMBL-Plants: tr|V7CBB2|V7CBB2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0227400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:53736950..53738407) extracted from Lotus japonicus Gifu genome v1.2.
TTCATTTGTAAATCTGCAGTCATGCATGACTTGTGCATGATCCATACTGACCTGAAGCCTGAGAACATACTGCTAGTTTC ACCAGATTATGTCAAAGTTCCTGACTACAAGGTATGTTTCCTGTTTGCACATGTGGCTATTTGTTTTATAGACTCGTGCA CTCTTTGTTTTTATAATTTTTCCTACTCATGGTGCACCTGTGATACAGGTGAGAAGAGAAAAATCTTAAATTCTAGACAC ATGTCTGTTTTATGTCTGTTAAGAGAATGTAATTGACATTCAAACTGCACTATATAAAATACTAATTTGAAATAAAAGTT TCTGTTATCAGTGGTTGTTGGTAGTTTTTTTTATGACCATTGTCTCCTTTTTTCTTATTCGCAGAACACACTTAGGATCA TGTTTGTGTCCTTTATTTTTTAGTTTGTTTTGATGTGAGAAGTAAAAATTAAACCAATATGTAGCATTGCTCCTTTTTTT TTCGAAGGCATTTATTGATTCAGTTTCTGACATTCATTTTCTTGTTGAACAGAATTCATCTAGATCACCAAATTCCTATT TCAAGAGAGTGCCCAAGTCAAGTGCTATAAAGGTTATTGACTTTGGCAGTACCACTTATAAGCGAGAAGATCAAAGTTAC ATTGTATCAACTCGTCATTATAGAGCACCTGAAGTCATCCTTGGTATATACAAATTCTATGGAAAGAAAAGCTACATTCT AGTTTCATGATGAATTATATGATACTGGAAATATCAACTGTATTGTTGATTTTGGCAATGGTTGTGTAGGACTTGGCTGG AGTTATCCATGTGATACATGGAGCGTGGGATGTATACTGGTTGAACTATGCACGGTATTTTTTACTCTTAGAAAACCTTG TCTCAGCACACTCATCCAACTTTTGAAGTTCTGACCTGTGAGCATCTGTTGTAGGGCGAAGCTTTGTTTCAGACTCATGA GAATTTAGAGCACCTTGCCATGATGGAGAGGGTACTTGGTCCATTACCGCAGCACATGTTGAAGAGAGTCGAGTGAGTAA CTTACGATTGGAACTTGTATCAATTTGTTGATTTTCAAACATGACAAATGAGTATGTATTTGCTTGTGCATGTTCAGCCG ACATTCTGAGAAATATGTTAGAAGGGGTAGATTAGACTGGCCTGAGGGCGCGACCTCAAGGGATAGTATTAAAGCTGTAA CAAAGCTTCCCAGGCTACAGGTTTGTTTAGTTACTTTTTGCTTCTTGATTTACAGCATAAAACAAGTTAAATGGTTTTTA TTGACTTTTCTTTGTAATTTTTGTCAAACAGAACCTTATAATGCAGCATGTTGATCATTCAGCTGGTGATCTCATACATC TCTTGCAAGGGTTACTTAGATATGACCCCTCTGAGAGACTTACAGCTAAGGAAGCTCTGAATCATTCTTTCTTCATGAGA GATAATCTTCGGAGATAA
CDS sequence (LotjaGi4g1v0227400.7) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCATGACTTGTGCATGATCCATACTGACCTGAAGCCTGAGAACATACTGCTAGTTTCACCAGATTATGTCAAAGTTCC TGACTACAAGAATTCATCTAGATCACCAAATTCCTATTTCAAGAGAGTGCCCAAGTCAAGTGCTATAAAGGTTATTGACT TTGGCAGTACCACTTATAAGCGAGAAGATCAAAGTTACATTGTATCAACTCGTCATTATAGAGCACCTGAAGTCATCCTT GGACTTGGCTGGAGTTATCCATGTGATACATGGAGCGTGGGATGTATACTGGTTGAACTATGCACGGGCGAAGCTTTGTT TCAGACTCATGAGAATTTAGAGCACCTTGCCATGATGGAGAGGGTACTTGGTCCATTACCGCAGCACATGTTGAAGAGAG TCGACCGACATTCTGAGAAATATGTTAGAAGGGGTAGATTAGACTGGCCTGAGGGCGCGACCTCAAGGGATAGTATTAAA GCTGTAACAAAGCTTCCCAGGCTACAGAACCTTATAATGCAGCATGTTGATCATTCAGCTGGTGATCTCATACATCTCTT GCAAGGGTTACTTAGATATGACCCCTCTGAGAGACTTACAGCTAAGGAAGCTCTGAATCATTCTTTCTTCATGAGAGATA ATCTTCGGAGATAA
Protein sequence (LotjaGi4g1v0227400.7) extracted from Lotus japonicus Gifu v1.2 Proteins.
MHDLCMIHTDLKPENILLVSPDYVKVPDYKNSSRSPNSYFKRVPKSSAIKVIDFGSTTYKREDQSYIVSTRHYRAPEVIL GLGWSYPCDTWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRVDRHSEKYVRRGRLDWPEGATSRDSIK AVTKLPRLQNLIMQHVDHSAGDLIHLLQGLLRYDPSERLTAKEALNHSFFMRDNLRR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 215 | 215 | 5.8E-137 | – | |
| PANTHER | 1 | 215 | 215 | 5.8E-137 | – | |
| Gene3D | 1 | 209 | 209 | 1.6E-63 | – | |
| Pfam | 1 | 210 | 210 | 2.3E-30 | ||
| SMART | 1 | 210 | 210 | 3.6E-9 | ||
| ProSiteProfiles | 1 | 210 | 210 | 25.234 | ||
| SUPERFAMILY | 1 | 213 | 213 | 2.08E-43 | ||
| ProSitePatterns | 6 | 18 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi4g1v0227400.7, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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