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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0234800 |
| Transcript ID | LotjaGi4g1v0234800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein KINESIN LIGHT CHAIN-RELATED 3; TAIR: AT1G27500.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|F4HSX9|KLCR3_ARATH Protein KINESIN LIGHT CHAIN-RELATED 3; TrEMBL-Plants: tr|A0A1J7GGV8|A0A1J7GGV8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0234800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:54897102..54900769) extracted from Lotus japonicus Gifu genome v1.2.
GAAAAAACGAACAAACAAACAGAGCAAGAGCAGTTGCAGGTTGCGCGCGGTTGGTTTGGGAAGAGGAATCGCAGAAATTC CATTCCATTCCAACTCTGCACAACCAGAAAACCTTCCATTTTTCTCGTCATTTCTTCTTCCTCCTTTCAATTCTCATCAT TGTTCCGCATTTTGTACCATTTCCTCTCTTTTCTCTTCAATTCTCTGCTTCTCTGCCTTGGTTTGGTGCTCATTGTTAAG GTACAATAGCATTCCTTTTATCTTCTTGTTTTAATGAACATTCATGTTTGCTACATCCTTGGTTATGAAATTGATGTGCC TTGTCTAATTAATCATGTGCAATTTGGTTATTTATCATTGTATTGTCTAAAACTATTTGTGTTACAATAATAAATTTACA CATTGTACCTTGATGCTTGCCAATTTAGATTCCCTTTCACCCTTTTTACCAGGCTTCATCTTCAAATGCATTCTTTTCAT TTTGCTTTGCATGACTTTCAATTATCATATTATAACATTTGCTTTATCCTTACTGTTATTTTTTTATTTGGATTTTGTTT ATCCTTGAGTAAGATTTATTTTGTAGGTTCTCAATTCCAAGGGAATAAAAGATGCCAGGAATTGTTGCAGTTGTAGTTCA TGATGAAGGGAGAGTAAATGAAATAAATGAGATTGATAACACTTTACCCTCTAAGGAAACCTTAACTCCAATCAAGCCCC CAAGGACTCCACAAAGACATCAACGTGCCGCCTCCGTTGATCGGCTTTATGACATGCAAAGTTCTGATCAATCACCCTCG ACACGAAGTTTCGGTTCGGATATTGAAGAGTCTAGTGTTGATTCAGAATTCCGCCGTCTAGTTGGGGGAAAGAAGAGGGG AGGGGGCTATAGCAGCGAAGCATCTTCTAGAATGGGTAGTCCTTGGAATGATAAGAAGTTGGAAAAGGTGAATGGGTTTC AGTCTCCAACTAACAAGTCATCAAAATCAACACCAAAGGGAAAGTGTCCTCCTGCAAAACCTCCTGTCGAAAAGAAGAAT GTTAATCCTGTGAGAAAACAAAACACTGGAGTTGCTCGTGTGACAAAGCCTAAACATTCTTCTACCCGAAGATCACTTTC GCTTGGTCGAGTTGAGATTTCCACTGATTCAACAGTAGACAAGCCTGAGCTGGGACCAGTTTTACTGAAGCAAGCAAGGG ACATGATTTCATCAGGAGAAAATCCAGAGAAAGCTCTTGAGTTAGCTCTTCAAGCAACAAAATTGTTTGAGAAGGCTGCT AAGGGGAAACCGAGTTTGGAGCTGGTAATGTGTTTACATGTAACAGCAGCAATATATTGCAGCTTGGGGCTTTACATCGA GGCAATTCCAATTATCGAGCGCTCAATTGAGATTCCTGTGATTGAGGAAGGCGAACAACACGCCACTGCTAAATTTGCCG GATACATGCAATTGGGAGACACATATGCTATGTTAGGCCAGATTGAGAATTCAATTATGTGCTACACCTCAGGGCTGAAA GTTCAGATGCAAGTGTTGGGAGAAGCAGACCCGAGAGTCGGCGAAACATGCCGGTACGTGGCTGAAGCTAATTTTCAAGC ACTGCAATTTGATGAGGCAGATAGGCTGTGCCAGATGGCTCTTGATATTCACAGATCAAATGGTTCACCCTCATCTCTTG AAGAAGCTGCTGACAGGAGGCTGATGGGACTTATATGTGAAATAAATGGGCATCATGAAGCGGCGCTGGAGCATCTTGTT CTAGCAAGCATGGCAATGGTGGCAAATGGACAGGAAGTGGAAGTGGCATCTGTTGACTGCAGCATTGGCGACACGTACTT ATCCTTGGCTAGATATGATGAGGCCATCTTCGCATATCAGAAAGCGCTAACAGTTTTCAAGACTCACAAAGGAGAGAATC ATCCTGCTGTGGGATTAGTCTTTGTTCGTCTGGCCGACTTGTATAACAGGACATGGAGAATAAAGGAATCAAAATCATAT TGTGAGAATGCTCTTAGGATATATGAGAATCCCATGTCTGGGGTGCCTCCGCAGGAGATTGCAAGTGGTTTTATGAATGT TTCAGCTATCTATGAATCAATGAATGAGCTTGATCAGGCACTTAACTTGCTGCACAAGGCATTAGAGATATACAATGATG CCCCTGGTCAGCAAAGCACAATAGCAGGAATTGAAGCTCAGATTGGGGTCATGTACTTCATGTTAGGGAACTATACTCAA TCGTATAATTCTTTCAAGAATGCTGTCTCGAAGCTTCGCGCTACCGGAGAGAAGAAATCAACCTACTTTGGTATTGTTCT TAATCAGATGGGACTTACTTGTGTGCAGCTCAATGCATTAAATGAGGCTGCAGAATTATTTGAAGAAGCAAAGATTATTT TAGAACTAGAATATGGATCCTATCACCCTGAAACCCTTGGGGTATGTAGCAACCTTGCTGGCACGTTTGATGCAATTGGC AGGTATATTTATCCACCTTTCATGATTGTTTATTTTTGTTAGGTTATACCTTCTTCTATTTGCATATCTTTTTTCACTAC TAGAGCTAGTATTTGCATCCTTCTATTGTGGCATTATGAGCCCGTTTGGATAGAGGCCTTGTTGGAGCTTATTGAAGGTT ATCTACTAGAAAAGATGCTAAATAAGCTCCAATAAATACTCTTTGATTTGCATCCAAACGGGTACTATGTGAAGCAGGAT AGTACATTGTTTGTGATCACATAATCAGGTTGAGCCCCTAATAGTAATGATGAGTTTAATGCCTATTATTACCAAAAAAA CATTATCCTTGTCCTATTCTTAAGAAAAAGAAGAAGACACAGATTCAGAAAATAACAATTACTTGAAATTTCTGGATTCA TGGCTTCTGAGATGTTTAAATTACATGAAATGGTTACTTGATAGTTTTTTTCCTCATGCACTGTGATATTCTATTCCAGG TTGGATGAGGCAATTGATATTCTGGAGTACATTGTCACCGTGAGGGAGGAAAAGCTTGGGACAGCAAATCCTGAAGTTGT TGATGAGAAGAGAAGGTTGGATGAATTGTTGAAGGAAACAGGTAGAGTTCGGAGCAGAAAAACCAAGTCATTGGAGAACC TTCTTGATGCCAGTACTCGTACTACTAACAACCTTGGCATCAAGGCATGATTATGAAAACTCAATGCTTCATAGCATGTT TGAATGCGTGTTGGACACAGCCTCGAAAGCATGTTGGCTTAGAAACTATATATTGTAGCTTTTAAGCGAACTTGATTTTG AGATCTATGCGTAATGTGCAACCAAACATGCACTTAATGTAGCTTTAGAAAAGCTAGGTAAAAAACATAGTTTACAAAGA TTTGGTTGTGATGGTGGTAGTTTTTGGTGCTGAAATGGGATGTTGATTGTCACAGTTTAATAAGTTAAGCTAAATCAGTA CCCAAAAGCTGTATTATTTGTAGATATGAAAGAAGTTTCCGTTCTTTGACCCTCCGGTTGCTGATATTGTTATGCCACCC ATGATGGTTCATAATTTTAAACGTGTAAGAAGGAAGGGACACCCGTCAAAAAAAAAAAAATTTTAAACGTGTTCAATTTA TTTGTCCATTGGCAATGTTCCTTTTGATGTATAACTTCAAATCACCTTATGGCTTATACCGATTTTGC
CDS sequence (LotjaGi4g1v0234800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCAGGAATTGTTGCAGTTGTAGTTCATGATGAAGGGAGAGTAAATGAAATAAATGAGATTGATAACACTTTACCCTC TAAGGAAACCTTAACTCCAATCAAGCCCCCAAGGACTCCACAAAGACATCAACGTGCCGCCTCCGTTGATCGGCTTTATG ACATGCAAAGTTCTGATCAATCACCCTCGACACGAAGTTTCGGTTCGGATATTGAAGAGTCTAGTGTTGATTCAGAATTC CGCCGTCTAGTTGGGGGAAAGAAGAGGGGAGGGGGCTATAGCAGCGAAGCATCTTCTAGAATGGGTAGTCCTTGGAATGA TAAGAAGTTGGAAAAGGTGAATGGGTTTCAGTCTCCAACTAACAAGTCATCAAAATCAACACCAAAGGGAAAGTGTCCTC CTGCAAAACCTCCTGTCGAAAAGAAGAATGTTAATCCTGTGAGAAAACAAAACACTGGAGTTGCTCGTGTGACAAAGCCT AAACATTCTTCTACCCGAAGATCACTTTCGCTTGGTCGAGTTGAGATTTCCACTGATTCAACAGTAGACAAGCCTGAGCT GGGACCAGTTTTACTGAAGCAAGCAAGGGACATGATTTCATCAGGAGAAAATCCAGAGAAAGCTCTTGAGTTAGCTCTTC AAGCAACAAAATTGTTTGAGAAGGCTGCTAAGGGGAAACCGAGTTTGGAGCTGGTAATGTGTTTACATGTAACAGCAGCA ATATATTGCAGCTTGGGGCTTTACATCGAGGCAATTCCAATTATCGAGCGCTCAATTGAGATTCCTGTGATTGAGGAAGG CGAACAACACGCCACTGCTAAATTTGCCGGATACATGCAATTGGGAGACACATATGCTATGTTAGGCCAGATTGAGAATT CAATTATGTGCTACACCTCAGGGCTGAAAGTTCAGATGCAAGTGTTGGGAGAAGCAGACCCGAGAGTCGGCGAAACATGC CGGTACGTGGCTGAAGCTAATTTTCAAGCACTGCAATTTGATGAGGCAGATAGGCTGTGCCAGATGGCTCTTGATATTCA CAGATCAAATGGTTCACCCTCATCTCTTGAAGAAGCTGCTGACAGGAGGCTGATGGGACTTATATGTGAAATAAATGGGC ATCATGAAGCGGCGCTGGAGCATCTTGTTCTAGCAAGCATGGCAATGGTGGCAAATGGACAGGAAGTGGAAGTGGCATCT GTTGACTGCAGCATTGGCGACACGTACTTATCCTTGGCTAGATATGATGAGGCCATCTTCGCATATCAGAAAGCGCTAAC AGTTTTCAAGACTCACAAAGGAGAGAATCATCCTGCTGTGGGATTAGTCTTTGTTCGTCTGGCCGACTTGTATAACAGGA CATGGAGAATAAAGGAATCAAAATCATATTGTGAGAATGCTCTTAGGATATATGAGAATCCCATGTCTGGGGTGCCTCCG CAGGAGATTGCAAGTGGTTTTATGAATGTTTCAGCTATCTATGAATCAATGAATGAGCTTGATCAGGCACTTAACTTGCT GCACAAGGCATTAGAGATATACAATGATGCCCCTGGTCAGCAAAGCACAATAGCAGGAATTGAAGCTCAGATTGGGGTCA TGTACTTCATGTTAGGGAACTATACTCAATCGTATAATTCTTTCAAGAATGCTGTCTCGAAGCTTCGCGCTACCGGAGAG AAGAAATCAACCTACTTTGGTATTGTTCTTAATCAGATGGGACTTACTTGTGTGCAGCTCAATGCATTAAATGAGGCTGC AGAATTATTTGAAGAAGCAAAGATTATTTTAGAACTAGAATATGGATCCTATCACCCTGAAACCCTTGGGGTATGTAGCA ACCTTGCTGGCACGTTTGATGCAATTGGCAGGTTGGATGAGGCAATTGATATTCTGGAGTACATTGTCACCGTGAGGGAG GAAAAGCTTGGGACAGCAAATCCTGAAGTTGTTGATGAGAAGAGAAGGTTGGATGAATTGTTGAAGGAAACAGGTAGAGT TCGGAGCAGAAAAACCAAGTCATTGGAGAACCTTCTTGATGCCAGTACTCGTACTACTAACAACCTTGGCATCAAGGCAT GA
Protein sequence (LotjaGi4g1v0234800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPGIVAVVVHDEGRVNEINEIDNTLPSKETLTPIKPPRTPQRHQRAASVDRLYDMQSSDQSPSTRSFGSDIEESSVDSEF RRLVGGKKRGGGYSSEASSRMGSPWNDKKLEKVNGFQSPTNKSSKSTPKGKCPPAKPPVEKKNVNPVRKQNTGVARVTKP KHSSTRRSLSLGRVEISTDSTVDKPELGPVLLKQARDMISSGENPEKALELALQATKLFEKAAKGKPSLELVMCLHVTAA IYCSLGLYIEAIPIIERSIEIPVIEEGEQHATAKFAGYMQLGDTYAMLGQIENSIMCYTSGLKVQMQVLGEADPRVGETC RYVAEANFQALQFDEADRLCQMALDIHRSNGSPSSLEEAADRRLMGLICEINGHHEAALEHLVLASMAMVANGQEVEVAS VDCSIGDTYLSLARYDEAIFAYQKALTVFKTHKGENHPAVGLVFVRLADLYNRTWRIKESKSYCENALRIYENPMSGVPP QEIASGFMNVSAIYESMNELDQALNLLHKALEIYNDAPGQQSTIAGIEAQIGVMYFMLGNYTQSYNSFKNAVSKLRATGE KKSTYFGIVLNQMGLTCVQLNALNEAAELFEEAKIILELEYGSYHPETLGVCSNLAGTFDAIGRLDEAIDILEYIVTVRE EKLGTANPEVVDEKRRLDELLKETGRVRSRKTKSLENLLDASTRTTNNLGIKA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 15 | 682 | 668 | 0.0 | – | |
| PANTHER | 15 | 682 | 668 | 0.0 | – | |
| MobiDBLite | 19 | 168 | 150 | - | – | |
| MobiDBLite | 51 | 71 | 21 | - | – | |
| MobiDBLite | 72 | 86 | 15 | - | – | |
| MobiDBLite | 113 | 128 | 16 | - | – | |
| MobiDBLite | 145 | 168 | 24 | - | – | |
| Gene3D | 190 | 358 | 169 | 3.4E-15 | ||
| SUPERFAMILY | 213 | 645 | 433 | 2.93E-17 | ||
| ProSiteProfiles | 275 | 308 | 34 | 6.313 | ||
| ProSiteProfiles | 275 | 308 | 34 | 6.599 | ||
| SMART | 275 | 308 | 34 | 26.0 | ||
| SMART | 317 | 350 | 34 | 62.0 | ||
| Gene3D | 359 | 529 | 171 | 2.9E-23 | ||
| Pfam | 364 | 518 | 155 | 1.0E-7 | ||
| ProSiteProfiles | 399 | 558 | 160 | 14.145 | ||
| ProSiteProfiles | 399 | 432 | 34 | 9.234 | ||
| SMART | 399 | 432 | 34 | 0.059 | ||
| SMART | 441 | 474 | 34 | 63.0 | ||
| ProSiteProfiles | 484 | 517 | 34 | 8.762 | ||
| SMART | 484 | 517 | 34 | 4.4 | ||
| ProSiteProfiles | 525 | 558 | 34 | 6.785 | ||
| SMART | 525 | 558 | 34 | 36.0 | ||
| Gene3D | 530 | 690 | 161 | 9.7E-19 | ||
| SMART | 567 | 600 | 34 | 160.0 | ||
| Coils | 580 | 600 | 21 | - | – | |
| Pfam | 608 | 649 | 42 | 0.0083 | – | |
| SMART | 609 | 642 | 34 | 250.0 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi4g1v0234800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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