Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0244900 |
| Transcript ID | LotjaGi4g1v0244900.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Calcium-dependent protein kinase, putative; TAIR: AT1G74740.1 calcium-dependent protein kinase 30; Swiss-Prot: sp|Q9SSF8|CDPKU_ARATH Calcium-dependent protein kinase 30; TrEMBL-Plants: tr|A0A072V1D7|A0A072V1D7_MEDTR Calmodulin-domain kinase CDPK protein; Found in the gene: LotjaGi4g1v0244900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:59652636..59657207) extracted from Lotus japonicus Gifu genome v1.2.
AATTTGTAGTAGTACTTTGTAGAGTCAAACAAGTTTCAGTACAAGATATTGGACTTTTTCCCTCCTCACCTAACTTAGCT TCCTCCTGTCAACCGGAGAACTCGCCGGCAACACCGTCACCATCACCATCACCACAACCAAAACCCAGTCACTCTGTTTC TTCCTTCCAACGAAAACAAAAACCAGAGAGAGAGAGAAACAGAGTTTGTTGAATGGTGTGAGCGGGTTCAGAATCACAGC GCGCATGGGAAACTGCAACGCGTGCGTGAGACCAGAGTCGGTAGAATCGAACCGGACGGCAAGCGAGTCGAACCGGGGGC GGAGGAGGAAAACCAAACCGAACCCATACTCAGAGTTGGGTGTGGGTGCGGTGGGAGGAACCGAGGCAACGATCCGGGTC CTGAAGGATGCGAACCCGCGGAGCCGAATCTGCGACAAGTATGTTCTCGGTCGGGAGCTTGGTCGGGGCGAGTTCGGCAT AACCTACCTCTGTACAGACAAGGAAACGAAGCAGGAGCTGGCGTGTAAGACCATCTCGAAGCGGAAGCTGAGGACGGCGG TGGACGTGGAGGATATCCGGCGAGAGGCGGAGATCATGTCCACGCTGCCGGACCACCCCAACGTGGTGAAGCTCAGGGCT ACCTACGAGGATGATGAGAATGTTCACCTTGTTATGGAGCTCTGCGGCGGAGGAGAGCTTTTCGACCGGATTGTTGCACG GGGGCATTACAGCGAGAGGGCGGCTGCACACGTGGCGAGGACTGTTGCGGAGGTTGTCAGAATGTGCCATGCCAATGGGG TTATGCATAGAGACCTTAAGCCTGAGAATTTTCTCTTTGCTAATAAGAAAGAGAATTCAGCTCTTAAAGCTATTGATTTT GGACTGTCTGTGTTTTTTAAACCTGGTGTGAAATGTGGCTAGCTTTCTATTTTGGTCTTGTTTTGTTTTAGTTTGATGAA TTGTGCTTAATGCTTATGATAGTTTTTTGGTTTAATTGATGATAGGGGAGAGGTTTTCAGAGATTGTGGGGAGTCCTTAC TATATGGCACCTGAGGTATTGAAGAGGAATTATGGACCTGAGATTGATATTTGGAGTGCTGGTGTGATTCTTTATATCTT GTTATGTGGGGTGCCTCCGTTTTGGGCAGGTACTATACTGGTGGTTTGTGTTTGGTGATTGTGGAGTGTTTGGACTTTGG TGTGATTTTTGTATTGGTTTATTGCAGAGACTGAACAAGGGGTTGCTTTGGCGATTTTGAGAGGGGTTATTGACTTCAAG AGGGAGCCTTGGCCTCAGATTTCGGATAGCGCCAAAAGCCTTGTGCGGCAGATGTTGGAACAGGATCCTAAGAAGCGCTT AACGGCTGAACAGGTGCTTGGTAAGTGGTTTGCCCGCATTAGGATTGTGTATGCTGACTAGTGACTTGGTGCTGAATTTA GTACGTGATGAAAATTTTATGTTTAGGTTACTGTTATTCTCTCTATCTTATAGAAATAGTAGTAAACACTGAGAAAAAGT GAATTCATGGGTTTATTGGATATTGGGCAGTTCCTGTGTTAGTCTCCATCTTGCTTAATGGTATGTGTGATCTGAGGTGG TGATCCATTTTAACGCTTAAACTATTTTCCTTCTATGAGGTCAACTTTCAAACAATAGTTTTAGTAACTGTAAAAATGCT GCATTTGATTTGTCCTTCATAATAGAAGCTCACATGTATTTTAAAAGGAATGTTATCCTTCTCACTGGACCGTTTGCCCC ATTGCCCTCTCCCCTCTTAAAAGAAAAGTAAAACTGTTGCGTATTTGAACCCTCACAACTACGTGATATCGAAAGTTATT CTAAATATGCACGTTTGTTTATTATGGTTGCAGAACATTCCTGGCTACAAATTGCAAAAAAAGCTTCAAATGTACCATTA GGAGATATTGTGAGGGCAAGGCTTAGGCAGTTCTCAGTAATGAATAGATTCAAAAAGAGAGCTCTTCGGGTTAGCATCTA TTGTCGTTGATTAATGATAATTGAGTTGAGTTCAGTTTTTTATTGAAGCAGTATGGAAGTTGAAACGTTGGTGATTTGTG TTTCTTTGAATAAATGCCACAGGTAATTGCGGAACATTTATCCGTTGAAGAGGTAGAAATAATCAAAGATATGTTTACCT TGATGGATACTGACAAAGATGGCAGAGTATCATATGAGGAGCTGAAGGCTGGTTTGCAGAAGGTTGGTTCAAAATTGGCT GAGCCAGAGATAAAGTTGCTGATGGACGTGGTAGGCTTTCTCTAAACTTCATTCCATTTATAATGTAATTGATCAATATA ATTTTAGTTCTTTGATTTTCACCATGATTATTTTTCAATTTGATGGAGCTCTTCGAAAAAACACTCTTTTTTGGAGATCT GTTGCTTGATTTCTTAGAAGAGTGCGCATTTTGCACCATTATAATGAACATGATGTTGTGCTTTCAAGGGATGGAGATTT TCTCTTTCCTACTTAACCTGATGTGTGCCTGATTTCCTGGTCTATATGTGTAGGAAAAATGTGTCTTATAGCATGTTTGG ATTCACGTTCAGATCTTTCAGAATCAATTCTGCTACCACACTAGGAGTAGCTTCTCCGAGAATCAATTCTCCTTTTAATG TGAAAATCTATTGTGTACCCAAACATGCACATAATTGGTTTTGGATCTTGTGTCGCATCACATCACATAATGATAAAGGC CAATTACAATGCGCGTATATTGTCAATATTGCCTGATATACTTATGGAGACTTTGTTTTACCATTATATTTGCTATTCAA AAATTACTTCTGAAACTTGTTAGTTTGAGTATGAAGGTTGTTTTAGTTTATCCTTAGATTGAAGAAAATGTTCAGAGACT GAATCATGAAAAAACAAACCCTGATTTGTTGTTATTGAGTTGATGAAATCCATTGTCCTTCGATATTCTATTTATACTAC TGAGCAATATGGTAGTACATGTTAAAGTATCTCTATTTCTCAATTATAAACAGTACCAGTTTACTAGACTCAAACTCACA TTGGTCTAAAGCTGATGCAACCTCTCACTTCTATTGAACTATACTCCTCCACATACTCCCTTTTTTTGTTTGAAATGTGC TTCATCTATTTGAAAGGAGCATAAATTGAATTTCCACTCATGCCCCAAGCCTAGACTTGTCAAGTATGCAAGTGTCATGA TAAATTTGTGATTCAAATCTCTGTTATTAATTGCTTAGGCTGATGTTGACGGGAATGGAGTACTTGACTATGGAGAGTTT GTAGCTGTGACGATTCACTTGCAAAAAATGGAGAATGATGAGCATTTCCACAAAGCATTCATGTTTTTTGACAAAGATGA GAGCGGTTATATTGAGTTAGGTGAGCTAGAGGAAGCCTTGGCAGAGGATTCAGGAGAAACTGATACTGATGTATTGAATG ATATCATGCGTGAAGTTGACACTGACAAGGTTTTGCTTTCATGCTCATGACTCATTCTTTAATTTTCCTTTGTGCTCGTT CTTTCTTTAGTTACACTGCTATTGTAACATAAACAAAAGCATATATGTTAGTGTTTCTCGCAAAACTTGATTATTCAGAT GGTAATAACTAATAACCATGTGAGGAGTGAAGATGTGGATTTTCAGCTTAATTCTCATGTTACATCTCATATACACATTC TCCACAAGTTTTAAAAACATTTTTCAATTTTCTCTCCCAGGACGGTCGCATCAGTTATGAGGAGTTTGTGGTAATGATGA AAGCTGGAACTGACTGGAGAAAAGCATCTAGACAGTATTCAAGGGAGAGATTCAAGAGCTTGAGCATAAATTTGATGAAG GACGGCTCGCTTCAGCTTCATGATGGGATTAGTGGCCAAGCTATTGTGGTTTGAGTACAAAGTTTTTTTTTTCTTTCTGT AACCTTTGTGCTCACCCAGCTTCGCTTTTCCTTTCACCACTTGCTGTTCTTGAAAGTATGGTTTGTGTAATCTCTTCGTG AAAGCAAGCAAGTTTTAGGTTAAAGCGTTTTGAAGTGCTGATTGCTGTGAGTTGGAGTTGGCTTTGATGTTAGATGCCTG AAGCATGCGTTGGAGAATTGCATACTGGAGAAGTTTTATAGCTTGTCAGCAAAAGTTGTGGGGGCACATGCTGCAGGCCT CAAAAGGTCACATATTCTTTGTATATCTTTGTCCTGTTATTAATCTGATAATTTCATTGGTAAATGTGATTTTTCTAAAA GCATATGTTTGGTTACCCGGTGAAATGCTGAGATACTCTAGAATTACTTATGGTTAGAGGCTTTGTAGGCTTAGGTTTTG TATATTGGATTCTGTGTAAATTGTATAACCAAACCTGTATTAGCTTGTGGATGGAAAACCTGTTTGGAATGGCGTTGTGA TTTTGTCTCAGTGCTGGCTTTTGGAGAAGTTTAGTTGTCAGCAGGTTAAAGCAATTCAATTTGGATGCCCATTTTTTCCC CTTTTCATTGTCACTTGTTTTCAAGGCTATTGCACTATAGTTATTGTCCTAGAAAAATGAAGGCTGAATATTAATAAAAT TATTTTCACTCC
CDS sequence (LotjaGi4g1v0244900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAAACTGCAACGCGTGCGTGAGACCAGAGTCGGTAGAATCGAACCGGACGGCAAGCGAGTCGAACCGGGGGCGGAG GAGGAAAACCAAACCGAACCCATACTCAGAGTTGGGTGTGGGTGCGGTGGGAGGAACCGAGGCAACGATCCGGGTCCTGA AGGATGCGAACCCGCGGAGCCGAATCTGCGACAAGTATGTTCTCGGTCGGGAGCTTGGTCGGGGCGAGTTCGGCATAACC TACCTCTGTACAGACAAGGAAACGAAGCAGGAGCTGGCGTGTAAGACCATCTCGAAGCGGAAGCTGAGGACGGCGGTGGA CGTGGAGGATATCCGGCGAGAGGCGGAGATCATGTCCACGCTGCCGGACCACCCCAACGTGGTGAAGCTCAGGGCTACCT ACGAGGATGATGAGAATGTTCACCTTGTTATGGAGCTCTGCGGCGGAGGAGAGCTTTTCGACCGGATTGTTGCACGGGGG CATTACAGCGAGAGGGCGGCTGCACACGTGGCGAGGACTGTTGCGGAGGTTGTCAGAATGTGCCATGCCAATGGGGTTAT GCATAGAGACCTTAAGCCTGAGAATTTTCTCTTTGCTAATAAGAAAGAGAATTCAGCTCTTAAAGCTATTGATTTTGGAC TGTCTGTGTTTTTTAAACCTGGGGAGAGGTTTTCAGAGATTGTGGGGAGTCCTTACTATATGGCACCTGAGGTATTGAAG AGGAATTATGGACCTGAGATTGATATTTGGAGTGCTGGTGTGATTCTTTATATCTTGTTATGTGGGGTGCCTCCGTTTTG GGCAGAGACTGAACAAGGGGTTGCTTTGGCGATTTTGAGAGGGGTTATTGACTTCAAGAGGGAGCCTTGGCCTCAGATTT CGGATAGCGCCAAAAGCCTTGTGCGGCAGATGTTGGAACAGGATCCTAAGAAGCGCTTAACGGCTGAACAGGTGCTTGAA CATTCCTGGCTACAAATTGCAAAAAAAGCTTCAAATGTACCATTAGGAGATATTGTGAGGGCAAGGCTTAGGCAGTTCTC AGTAATGAATAGATTCAAAAAGAGAGCTCTTCGGGTAATTGCGGAACATTTATCCGTTGAAGAGGTAGAAATAATCAAAG ATATGTTTACCTTGATGGATACTGACAAAGATGGCAGAGTATCATATGAGGAGCTGAAGGCTGGTTTGCAGAAGGTTGGT TCAAAATTGGCTGAGCCAGAGATAAAGTTGCTGATGGACGTGGCTGATGTTGACGGGAATGGAGTACTTGACTATGGAGA GTTTGTAGCTGTGACGATTCACTTGCAAAAAATGGAGAATGATGAGCATTTCCACAAAGCATTCATGTTTTTTGACAAAG ATGAGAGCGGTTATATTGAGTTAGGTGAGCTAGAGGAAGCCTTGGCAGAGGATTCAGGAGAAACTGATACTGATGTATTG AATGATATCATGCGTGAAGTTGACACTGACAAGGACGGTCGCATCAGTTATGAGGAGTTTGTGGTAATGATGAAAGCTGG AACTGACTGGAGAAAAGCATCTAGACAGTATTCAAGGGAGAGATTCAAGAGCTTGAGCATAAATTTGATGAAGGACGGCT CGCTTCAGCTTCATGATGGGATTAGTGGCCAAGCTATTGTGGTTTGA
Protein sequence (LotjaGi4g1v0244900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGNCNACVRPESVESNRTASESNRGRRRKTKPNPYSELGVGAVGGTEATIRVLKDANPRSRICDKYVLGRELGRGEFGIT YLCTDKETKQELACKTISKRKLRTAVDVEDIRREAEIMSTLPDHPNVVKLRATYEDDENVHLVMELCGGGELFDRIVARG HYSERAAAHVARTVAEVVRMCHANGVMHRDLKPENFLFANKKENSALKAIDFGLSVFFKPGERFSEIVGSPYYMAPEVLK RNYGPEIDIWSAGVILYILLCGVPPFWAETEQGVALAILRGVIDFKREPWPQISDSAKSLVRQMLEQDPKKRLTAEQVLE HSWLQIAKKASNVPLGDIVRARLRQFSVMNRFKKRALRVIAEHLSVEEVEIIKDMFTLMDTDKDGRVSYEELKAGLQKVG SKLAEPEIKLLMDVADVDGNGVLDYGEFVAVTIHLQKMENDEHFHKAFMFFDKDESGYIELGELEEALAEDSGETDTDVL NDIMREVDTDKDGRISYEEFVVMMKAGTDWRKASRQYSRERFKSLSINLMKDGSLQLHDGISGQAIVV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 529 | 529 | 0.0 | – | |
| PANTHER | 1 | 529 | 529 | 0.0 | – | |
| MobiDBLite | 1 | 40 | 40 | - | – | |
| SUPERFAMILY | 62 | 325 | 264 | 1.04E-86 | ||
| CDD | 65 | 323 | 259 | 1.27907E-137 | – | |
| Gene3D | 66 | 149 | 84 | 2.1E-159 | – | |
| ProSiteProfiles | 66 | 324 | 259 | 48.937 | ||
| SMART | 66 | 324 | 259 | 4.9E-98 | ||
| Pfam | 66 | 324 | 259 | 1.4E-74 | ||
| ProSitePatterns | 72 | 95 | 24 | - | ||
| Gene3D | 150 | 329 | 180 | 2.1E-159 | – | |
| ProSitePatterns | 186 | 198 | 13 | - | ||
| Gene3D | 330 | 503 | 174 | 2.1E-159 | – | |
| SUPERFAMILY | 352 | 531 | 180 | 7.0E-44 | ||
| ProSiteProfiles | 367 | 402 | 36 | 15.657 | ||
| SMART | 371 | 399 | 29 | 1.7E-6 | ||
| Pfam | 372 | 431 | 60 | 7.0E-11 | ||
| ProSitePatterns | 380 | 392 | 13 | - | ||
| ProSiteProfiles | 403 | 438 | 36 | 10.385 | ||
| SMART | 407 | 435 | 29 | 0.02 | ||
| ProSitePatterns | 416 | 428 | 13 | - | ||
| ProSiteProfiles | 439 | 474 | 36 | 12.533 | ||
| Pfam | 442 | 505 | 64 | 1.8E-12 | ||
| SMART | 443 | 471 | 29 | 0.022 | ||
| CDD | 443 | 505 | 63 | 7.89576E-17 | ||
| ProSitePatterns | 452 | 464 | 13 | - | ||
| ProSiteProfiles | 475 | 510 | 36 | 14.29 | ||
| SMART | 479 | 507 | 29 | 2.8E-7 | ||
| ProSitePatterns | 488 | 500 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi4g1v0244900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…