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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0259300 |
| Transcript ID | LotjaGi4g1v0259300.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Phenylalanine--tRNA ligase beta subunit; TAIR: AT1G72550.1 tRNA synthetase beta subunit family protein; Swiss-Prot: sp|Q9SGE9|SYFB_ARATH Phenylalanine--tRNA ligase beta subunit, cytoplasmic; TrEMBL-Plants: tr|G7JT40|G7JT40_MEDTR Phenylalanyl-tRNA synthetase beta chain; Found in the gene: LotjaGi4g1v0259300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:61473677..61483292) extracted from Lotus japonicus Gifu genome v1.2.
AGCACGATGCCGACGGTGAGTGTTGGACGCGATCGCCTGTATGCGGCTCTAGGAAGAACTTACAGTGAGCTTCCAGTTTA CACTCTCTCTGTTATTGCATCGGTGAATTTTCATCACATTCCATTTTGACATTTTTGTGTGTTCGAATTTTCAGCGCAAG AGGAATTCGAAGACCTCTGCTTCAGTTTCGGAATCGAGCTTGACGATGTGGTAAGCACTTCACCGTAATTCATGATGAAT CGATTACAGTAATGTTATCATCAACATTATCTGATGAGTACTGTGTGATTGTGTATCAGACCACAGAAAAGGCAATTGTG AGGAAAGAGAAGCATTTGGAGGAAGAAGAAGCTGGTGAGGATGAAGAAGTTATCTATAAAATTGAAGTTCCCGCAAACAG GTGCCATTTTGATGATATCTTTGTTCTTTTTGCTTCAGATGAGATACGAATCAGTGAAATGTGATTGTAGTGTACATTGG ATATATGATATGATTGATTATAAATGTTTGCATTATGTTCACCTGTTTGTTTTTACTTGATCAGTTTTTGAATGGTGAGG TTTATCCATTCTAGAGATTTTATGAATTTCTCAAATTTCTTTGGCTATGTCTTAGGTTTCTTCTTTGATTTCAGATGGAT GCTGTCAGTTACATTATGAATTAGCTTTGAATGCTTTTGTAATTTGTAGGAGATTTGACTTGAAAATTCAAGCTGGTTGT TAATAATTGGAACAGATACTGAGTGATGAAATATCAGTAGAAAACAAAATAACAATAGTCATTATGGATGATGTGACACT TGTTTTTCATAATGCAATTGCAAAGTCATTGGATTTTAAAACATGCTAGTTTGTCAATGATGTAAAACCATTTAAAGCAT GACACAAAGTGTTGCCCCTCTATGTGAATGATTTGTGAAACAATTTTGTGACAAGTATTGTTTTCCTTATTTCAAAAAGT ACTGCTAACTTTTTTTTACTTTTTGGACAGGTATGACCTGCTCTGCCTTGAAGGACTTGCTCAAGCCCTTCGAGTTTTCT GTGGGTTCCAAGAGATCCCTACTTACAAATTGGCTGACGTTGGGAAGGACGCAATGCTCAAAATGCATGTGAAGCCTGAG GTGATTATATCATCCATGCACATATCTTTTTTCTTTTTAAGTATGGTCCATTTTAAGTGGAAATTTCTTTTATCTTTAAT CATTGTAGACAAAAAAGATTCGTGAATTTATTGTATGTGCCGTGTTAAGAGGCATAACTTTTGATAAGGCAAGATACAAC AGCTTTATCGACCTCCAAGACAAGCTTCATCAAAACATTTGCCGGTAATATGACTTGACTCGCTGCTCTATTTATTTTGA GCTGCACACTGTTTGTTTTTCAATCCTAACCAAAATAGTTCTGCAAGTTTAATGCAATCATATATGCCCTTTGTTCTCCT TATGGAGTTTTCAACAACTTGGATAAATTTTTAGAATATAAAAGATGATCCTCTGTGTTCCAAGCTGAGCCTTGTTTATT TATTGTACATTATTTTCTTATAGGTTGTTTGGGAGGGGGTTTTGGAGGAAAGGGAAGGGGACGGCATAATTATTATTTTA AATAAATAGTTTATAATTTGATAATTTTTTATAATGAAATCTATGAAATAATATATTAGCATAAAAATTAAATCATAATC ATATATTTATCGGTATAAATATATTACTACCTCTGTTCTTTATTAACTGTCAAGAAAGAGAAGATACACATTAAGAGGTG CAATTAATTTTCAGAAAAATATTATATGTTTTCCTCTCTTACCCTTTAAAATATATTTTATCTTTCTTCATTTATTCTCA TAAGGGTATTACTTAGAAAAACATCAGTTAATGCTCTCTTGAAATTTTAAGTGGACAAATATACAGAAATAATTTTTTTT CTTTAAGTGGACAGTTAATTAGGAACAAAGGCAGTATATAATTATCTATTTTTTAAAAAAAATATGCCCTCGCATTCCCT TCCCCTCAAAAACCTCCTGCCAAAGATCTTAATCTATTGCTTCAATAGCCTTTGTCAAAAATTTGGAAAACTCTTCTTGT TGGTTGATTTTGGTTTACTTTTAATTCCACTTTATGTTGTTGTCTTTCTAAATTAAGCTCTCCTTTCATTCATGAATCAA TCTATATGCCTTTGTTGTTTCATTGTTTTTTGTAATTTCTTTTCACAGCTCCCTTAATTTTCAGTTTATCTGTTTTCATT CTTCATTTTTATTTTTCAGTCGAAGAACTCTTGTTGCCATTGGAACTCATGATCTGGATACATTGGAGGGCCCTTTCACC TATGAGGTTAATTTCTATCAAACTGTATATCATGAAAATTATTTGCATTGTGGTAGACAACTTACAAATTTAAGATTTAA AAAGACGTGTATATTGTAATATGTTGGATCAGTTGTATGAAATGTAGAAGGGCCTATCTCTAACAGTCTTTTATCTTATG ATTAGTGTTAGTTATTAGTCAGTTGAGTTATTTAGTAGTTAGTTAAAGTTTGTTGTACTTGGAAGCTGTCAATAAGAAAT AAGATTAACATAATTTATCTTTCTATCAAATCTTAATAGTGTTCTATGTTTGAGGAATGTTAGTGCCCCTTGGGAATGGG GAAGTGGGCACATTGGTTGTTTATGGGTGGCATTCAGCTGTAGGAAAGTTTTTGTAGGGAGGGCCTCCTGTTTGAAATCA TGCGTCAATTTACGAAGAAAGTACTTTTCAAGCAATTTCTTTTCTTTTCTTTGTGATGGAATGGAACTATGATTGTTTGT TTACGTTGTCATAAATTATTGATGTGAGGGAACTTTACCTCTTGTTCCATGCTGCTTTCTGTTTGAAATTATTAACATAT CACTTTGCTTTTATGCTTAATGGTGTTAAAGGAAGCACAAGTGTTGCTCTATGTGGAGTCGTTTTGTTTAGTACCCAAAC TTGCATCTGATTTGTTATAAAACCAATTAACCAAGACAGATATCAGGAGTTAATTACCAGTTTCTTTTTTAATGTGCTAA TCTCTTGTTCTCTACATCATCAGTATTAATGACTAGACATGTGTTTTTTTTTTCCAGGCTTTGTCACCTTCAAGTATTAA TTTTACGCCCCTAAAGCAGGTAACTTTTATTTAGGGCATTCGGTTTCTTGGAAAGCATATGTTTGAAAGCCTGTAATATC CTCCTAGTGTAACTAAAACCACATGTTTTAGCTTATACTCAGTACTCACTAGTGTACCATACAGCTAACACCTGTTATAT GAATATTTTGTACAAACTGCTAAACTAGTATTTGCACTTTCTCCCTTTCCTTTGTTCTTTTGGCATGCTAGGAAAGGAGC TTCAGCGCTGAGAAGCTGATGGAGTTCTACAAAGTGAGTACTTGTTTAATGTTTCCTTGCTTTATATATGTTAGTGATTA TCAGCCTAGCAAAAGTAAGCTTATTAATAATTGGAGTCCACCCATACTGTATTCATTTCATCTGTGATTATCATTTTCTT GTTTGGACATACTTCCTGTGAGATTTATCTGAATACTTTCTTGATTTATGTTTGACAGTCAGATATGAAACTGAAGAAAT TCTTGCATATAATCGAGAAGTCTGATGTTTATCCTGTTATATATGACAGTAAGAGGTATTATATTTTCATAGCATCCTGA TATTAAAATTTATTAAGATTTGAATTTTTTTTGTCATTTGTATAACACTGTTACAATCTTGCTGAACTCTTTAGACAGTG TGTATTTTGTTCAGAATAATTTATTTACATTTTAAAACTTTAAATTTAACTCTATAATTAGTATGAAACTATTAATGCAT TTCATAATTCTTGTTTATATTATATTAAGATGAGGATACATGTTAATTTATACTAAATTAAAATAATAATGAAATTGTAG ATGAATTATATATATATATATATATATATATATTTATATTTATGAATGCTTGTCATTATAATTCTAAATTAGGTTGAATT GATCTCTTTAATTATTCGTATGTGGAGAAAACAACGTCATTCAGGATGTAAGGGGTAATGATAAAAACTCTGGCACGGAA ATTGAGAAAATTAGACTTTTTAGGATTATTTTATTATCTTTTTGTATCTGGAAGTAGCATAAAGAAACACTAAGGGCTTG TTTGATTTCTGTATTTAAAAACAGTAGTCAGGAACAATTTGTAAAATCTGTTTTTAAAAAAAAAAAACTGTTTGAATGAG GTGTTTTACTATGTTGAATAAAGTGTATTTTGAAAACTTAAAGCGGCAACAGAAAACATGTCTAGGCTGTTTTGAGATTT TAGTTTTAAAAACTAAAAATAAACTGTTTTTGAAAACAGGTTATTACAAGTTTTTAAAATTTTCTGTTTTTAAAACAAAA AACATTTTTCAAAAAGTGCAAACAAGTACGACCTAAGTTTGTGAAATAGGACCTAATGAAAATTCATGTTCTATTTTTTG TTAAAAGTGCTTTTTGTAATATTTTTGAAAGTTAGATATGGCTTGACTTATAATGTACTCTGATGCTCTTACTTCCTACA TGCTTCTATTCAATTCAGTTACTGATATGATGTGATGTTTTGACAGACGTGTTTTATCTTTACCTCCAATTATCAATGGT GCACATTCAGCCATCACTTTGGAGACAAAAAATGTATTTATTGAATGCACTGCTACTGATCTGACAAAGGCGAAGATTGT TTTAAATACAATGGTAGAGCTTTGAATTTGGTTGTATGTTTTCTGTTTGCAAATTTGTAGGTGTTTCAATTGTTTGGATG ATAACATGCTATTCTTTATCTACTTAGGTAACAGCCTTCTCGGAATTTTGTGAAAACAAGTTTGTCATTGAACCTGTTGA AGTAATTAATTCTGAGGGAAAGTCAGAAATATATCCTGATTTATCTGTCTACAATATGGAAGTTTCTCTATCTTACATTA ATGGACTAATTGGGGTATCCTTGGAGGCAGAAGAGGTAATTACTTCTTCTAACTTGCTGATGTGTGATATGCAAGTGAAA TCTTGGTGCTTCGTATTGAATGGCTTGTAATCTTATTATATACATATATTAGACTTTGAGGTCTCCATTGAGTTTTTTCC TTCATAATTTTTTTCCAAAGGTAATTTACCTTTACATAACCAAGAATGTGTTGGAAGCATTACTGTTTTCCTAACTAGTG ACCCTAAAGCTTCTTTTTCAGTTTTGCACTCTGCTGAAGCATCACACTTTTGTATTATTTTAATCCCCCTTATTAGATAT TCTTGTTAAAGAAAAACTGAGACAGTGTTCTGCTCCTTTGTTTCCAGATTTTAACTTACTGTTTGAAAAATTGTCACACA TTAAGATATCTTAAGGACTTAGATTCTGTCTGTGTTAAAACAATAGAGATACCTTAAGACTTGTACGTTGTACAAGTTGA CTATGTTTTCTTTTATGTAGGCGTTTTACATCAATGGTTGAGTTCTAATGTTCATGTCATGATTACCCACAGTTCTGTTT ATTTAGTTTTTTATGTGTGGTGTATTGTCTCTAATGCATGTTTCAATGCTCATGTTTTCTAACAGCAACTGAAAAGAATA TCTTTTAACTCGTCATTCTTGTACTATAATTATTCCCCATTTCTTTCAGGTCACAAAGTTCTTAAACCGGATGCAATTGC ATGCCAAGCAGTCTACATCTGACAAAAAGCAGTGTAACTTTGTTGTATCTGTACCTCCCACTAGAAGTGATGTGCTTCAC CCTTGTGATGTTATGGAGGTACTGGCAGTGATAGGTTCGATCATTGCATTATGCATATTGGATCTACTAGAGTATATTTT ACTGAGATGACATCTCTTTTTTCCTTTTTCTGTTCTTTTTTATCAATAGGATGTTGCAATTGCTTATGGATTCAATGCTA TTAAGGATAAAGCAATAGTAGATAATAAAGGCTCAAAGAGACTGGCCGCTTCCTTGACACTACTTCCTCTGAATGAGATC AGTGATCTCATCAGAAAAGAGGTATAAAATTAAATAATACAGAATATGACTTCTGCGATTGAAGTATGTTAACAATAACA TTTCATGCTTTTGATTTTTCTAAATCAAATTTATTTCAGCAGAATAAATTACTAAAGCACAGCTATCAATGTATTGTTAT TTGAAGTGTCTAGTTATCTGAATCTTGTTGTTCCTAACATCTTTTAGGTTACAATGATTGGATTCACGGAGGTCTTGACA TTTATACTCTGCTCTAAAAAGGAAAACTTTGCCATGCTAAACCGGAAAGATGATAAATCTAAAGCAGTTATCATTGGAAA TCCTAGGTCTTCAGACTTTGAGGTTCACTCTCTTTATCCAACTTTTTCAACTACAAGGTTTATATGAAAAAAAATTATCT AGCTGTAATGTAAATGAAATGTCATAAAATGGTCCGTATTAGTATTGGTCATTTTGTTAGTTTTCCTGTCTTCTTAAGTT GTTCCACAAATTACTAGTAGTTTTCACTGTCTGCACATAGCTCTTCTGATTGTTTTTATTAATATGTCATTTCTTCCTTT ATATTTGATTAGTGAAGTGGCTCATTCTTCATTTTCATGACCTTTTTTGTATATGTAATTATGTATGCTTATATATGCTG TCTTGGAATGCATCGCGTGATGTCAGCTTTGCTACATCCCAGCTACTGTCTACAAATCAATTTGCCGAAGCATACTGATA AATTTTTCTCATTACGACAAACTTTTTTCTTTCCCTTTTCTGTTTATTTTTTATTTTGCTGCGTGGATTATATTTCCAGT ATTGATATACAACCTGAAGTTGCACATACATATTACGTACTGAATCAATAGCCTGCATTTTATCTGCATTCTGCTCATTA GTAGTAGATTTACTTGGTGATAAACTTGGAAGTTAAACCAGTTGCACATTTGACTTGATAGGATTGTATAATTCTAATAT TGAACTAGTTAGGCTACGTTATACTTTGATATGATGATCTGCCATTTTGCTGGGTTCATTACTTCGATGTTTCTAACCTT TTCCCTCACTTCTTCTCGAGCACTTAATACACTCGATTCTATCTATGACAATTTGTGTTCCTTTGCATTTGGACTTACAT TTATTTAAAATAAGGGTAAAACTTAAGTACAGTACCATTGGTGCAGTTGGTGCTGTTCTTCAATGAAAAAATGACACCTG GAATTGCACTTAATTTCTTTTTGGAACCAATCCAGGAAACTTCAACACGTCTTCCTTCCCTCTTCCTCCAACCTCTCCAA CCTTCTATCTCCCTACCACCTCGCACAACATGAGTCTCTCCTTGTGCTCGCGGATGTCAATTGAAGTTGCTGGCCCAGAT TATGACATGGACGACCATGAAAAGAGCTGGAGATCTTAAATTGTAGCAGCCTCGACAACAGCCATGGTAGATTGCAGAAC CAATTATACAAAATCACCCTACTTCATTGCAATTTCTTCAAATGAAAGCCCTTTGTTTTTATCATTGTTCTTGAGATTCC AGATATTTACTTCTTCACACGAATGTTTATTCAATCCCTAATATTGTCACTCCAGAATCTGAGAAGATAAGTTTCAAACC CTCTTTCATAGATTTATGGCACTGGATTCCCAATGTTCAAAGAGAGGAGATATACTCCAATTTTCGGTGGAAACATGGTT ACAGAGGAAAGGCGGAAGTAGAGTATGTGTGGGAGAAAAGAATTGATTTGAAAAGTTAATGGTGTGGGGCTTGATGAGGC CAGGTGTCATTTTATGATTGAAGAACAGCACCAACAGCACAAATGGAACTGCACTTAAGTTTTTCCCTTAAAATAATTCA GCATATTGTTGGATTTGTGTATTCATTAAAGTGATATATTCGCTTTTCAATAAAATGATATATGTATCTTATTTTTTTGG GTTTTTTGCTTTAATTTAATTTTGATATCTAACATGTATTCAGGCTGTTCGGACTAGTCTTATGCCTGGCATTTTAAAAA CTGTTGCTCACAACAAGGACCATCCTAAGCCCATAAAGGTATTTACTTAAGGTCAACCCTCTGGTGATTTATCTTTTTAG TATGAGGCATATTTTCTATTATGAAAGCATGATCTTCGCATTAAAAATCCACTGTTAGTGATAAAAAATTATTTGGGATG TTTTATATTAGTTATATCCTTTCAGTGTAATATTTATGAATCTGACTTGAAAGTTTTTCTGCAAATCATTGTCATTTCAC ATTTCCACTATTCCTTAATTAGAGATAACATCTAGCATGCAACACTCGTATGAATACAGATGTATTAGAGAAGTTGATCT TATTATATTTCTGAACTTAGTTACAACTTACAAATCAAAGAAAGATTCAGACTTCAGTTAGAGAAATTTGGCTCTACCTC AGCACTTTACAATGCTATGTCACTTTTTTTTTTCCTGTTTTCTCTATAGTAAGCTGATAAGAATACATTTCGATCTTAAT TTTGATTCAGATTTTTGAAGTAGGTGATATAGCAATTTTGGATGACAAAAAAGATGTTGGTGCAAAAAATCTACGACAAC TTGCTGCACTTTACTGTGGGGCTAATGCAGGATTTGAGGTATACTTAGTAATGATTTCATGCCACTTTAGTTGGTTCTTT ACTCTTTGAATACAAGTTATTGAATATTTGATGTATCACTATCTCTACTTGATTGATCAGATATGATCAATTCCTTGATT GTTCTTTTTCAGAAGACTAAGAATCTACACTAGCCATATTTATAACAAAAGTTTGATATTTAAAATAAATATATACTCGC AGTTAGCATATCATAAATTAGCATTTTTCTTTCTAGACAAAGAATAAAACCTGAATTATTGTACTTAAATTTACCTATTG ATGTGCAGATAATTCATGGCTTGGTGGACAGAGTAATGGAAATGAATGGGATTCCCTTTGTTTCATCTGGTGATATATCG GGGTATTATATTGAGCGGTCAGATGTAAGTATGTTAAGTGTTAAATTCTACATAAGAGTTCTGTTTTTTTTTTTTGCCTT GTTGCTTATAAGGAACCTTTTAGTCTGCTTCTGGTGACTCGTTTTTTAACTCAACTGCTTTTTGAAGGAACCTGAGTTTC TTGCTGGAAGACAAGCTAGAATCGTTTACAAGGGAAAGCAAATTGGGATTTTTGGCATTGTTCATCCCGAGGTACTTAAG AACACTAACATTATGTCATCTTGGTTTGACATGGCCAAATTTTTGTACATTGGTTTCCCATATATTTTTTGTGTGATTAA ACCATATCTAACAAAGGTGCTTTTGGATGGGTTAAAATGATTAGAAAAGGGGGATTTGCAGAATGGTGGTGCAAGAGTTC CATATTTTTTTGTTGAGCAGATTGTTTCTCCCTGGCAATAAATCTCTATGTTCTATTCAAACTTAGCACTGTTTTATCTC TATTTCCTCATAATATAATTTGCATTTGTCCTTTCAAAACGAAGTACTAAAGTGCATGTACTTTGGAGTCATATACATCT AAAACAAATTGTTATATTTGTTTTCAGGTATTAAACAACTTCGACATTCCAGATCCTTGCTCCTTTGTAGAGCTTAACAT TGAAAGTTTGTTATAA
CDS sequence (LotjaGi4g1v0259300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCGACGGTGAGTGTTGGACGCGATCGCCTGTATGCGGCTCTAGGAAGAACTTACACGCAAGAGGAATTCGAAGACCT CTGCTTCAGTTTCGGAATCGAGCTTGACGATGTGACCACAGAAAAGGCAATTGTGAGGAAAGAGAAGCATTTGGAGGAAG AAGAAGCTGGTGAGGATGAAGAAGTTATCTATAAAATTGAAGTTCCCGCAAACAGGTATGACCTGCTCTGCCTTGAAGGA CTTGCTCAAGCCCTTCGAGTTTTCTGTGGGTTCCAAGAGATCCCTACTTACAAATTGGCTGACGTTGGGAAGGACGCAAT GCTCAAAATGCATGTGAAGCCTGAGACAAAAAAGATTCGTGAATTTATTGTATGTGCCGTGTTAAGAGGCATAACTTTTG ATAAGGCAAGATACAACAGCTTTATCGACCTCCAAGACAAGCTTCATCAAAACATTTGCCGTCGAAGAACTCTTGTTGCC ATTGGAACTCATGATCTGGATACATTGGAGGGCCCTTTCACCTATGAGGCTTTGTCACCTTCAAGTATTAATTTTACGCC CCTAAAGCAGGAAAGGAGCTTCAGCGCTGAGAAGCTGATGGAGTTCTACAAATCAGATATGAAACTGAAGAAATTCTTGC ATATAATCGAGAAGTCTGATGTTTATCCTGTTATATATGACAGTAAGAGACGTGTTTTATCTTTACCTCCAATTATCAAT GGTGCACATTCAGCCATCACTTTGGAGACAAAAAATGTATTTATTGAATGCACTGCTACTGATCTGACAAAGGCGAAGAT TGTTTTAAATACAATGGTAACAGCCTTCTCGGAATTTTGTGAAAACAAGTTTGTCATTGAACCTGTTGAAGTAATTAATT CTGAGGGAAAGTCAGAAATATATCCTGATTTATCTGTCTACAATATGGAAGTTTCTCTATCTTACATTAATGGACTAATT GGGGTATCCTTGGAGGCAGAAGAGGTCACAAAGTTCTTAAACCGGATGCAATTGCATGCCAAGCAGTCTACATCTGACAA AAAGCAGTGTAACTTTGTTGTATCTGTACCTCCCACTAGAAGTGATGTGCTTCACCCTTGTGATGTTATGGAGGATGTTG CAATTGCTTATGGATTCAATGCTATTAAGGATAAAGCAATAGTAGATAATAAAGGCTCAAAGAGACTGGCCGCTTCCTTG ACACTACTTCCTCTGAATGAGATCAGTGATCTCATCAGAAAAGAGGTTACAATGATTGGATTCACGGAGGTCTTGACATT TATACTCTGCTCTAAAAAGGAAAACTTTGCCATGCTAAACCGGAAAGATGATAAATCTAAAGCAGTTATCATTGGAAATC CTAGGTCTTCAGACTTTGAGGCTGTTCGGACTAGTCTTATGCCTGGCATTTTAAAAACTGTTGCTCACAACAAGGACCAT CCTAAGCCCATAAAGATTTTTGAAGTAGGTGATATAGCAATTTTGGATGACAAAAAAGATGTTGGTGCAAAAAATCTACG ACAACTTGCTGCACTTTACTGTGGGGCTAATGCAGGATTTGAGATAATTCATGGCTTGGTGGACAGAGTAATGGAAATGA ATGGGATTCCCTTTGTTTCATCTGGTGATATATCGGGGTATTATATTGAGCGGTCAGATGAACCTGAGTTTCTTGCTGGA AGACAAGCTAGAATCGTTTACAAGGGAAAGCAAATTGGGATTTTTGGCATTGTTCATCCCGAGGTATTAAACAACTTCGA CATTCCAGATCCTTGCTCCTTTGTAGAGCTTAACATTGAAAGTTTGTTATAA
Protein sequence (LotjaGi4g1v0259300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPTVSVGRDRLYAALGRTYTQEEFEDLCFSFGIELDDVTTEKAIVRKEKHLEEEEAGEDEEVIYKIEVPANRYDLLCLEG LAQALRVFCGFQEIPTYKLADVGKDAMLKMHVKPETKKIREFIVCAVLRGITFDKARYNSFIDLQDKLHQNICRRRTLVA IGTHDLDTLEGPFTYEALSPSSINFTPLKQERSFSAEKLMEFYKSDMKLKKFLHIIEKSDVYPVIYDSKRRVLSLPPIIN GAHSAITLETKNVFIECTATDLTKAKIVLNTMVTAFSEFCENKFVIEPVEVINSEGKSEIYPDLSVYNMEVSLSYINGLI GVSLEAEEVTKFLNRMQLHAKQSTSDKKQCNFVVSVPPTRSDVLHPCDVMEDVAIAYGFNAIKDKAIVDNKGSKRLAASL TLLPLNEISDLIRKEVTMIGFTEVLTFILCSKKENFAMLNRKDDKSKAVIIGNPRSSDFEAVRTSLMPGILKTVAHNKDH PKPIKIFEVGDIAILDDKKDVGAKNLRQLAALYCGANAGFEIIHGLVDRVMEMNGIPFVSSGDISGYYIERSDEPEFLAG RQARIVYKGKQIGIFGIVHPEVLNNFDIPDPCSFVELNIESLL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 602 | 602 | 3.8E-299 | – | |
| PANTHER | 1 | 602 | 602 | 3.8E-299 | – | |
| Pfam | 1 | 90 | 90 | 2.4E-33 | ||
| Gene3D | 1 | 89 | 89 | 2.6E-38 | – | |
| TIGRFAM | 1 | 603 | 603 | 7.4E-156 | ||
| SUPERFAMILY | 5 | 95 | 91 | 2.29E-10 | ||
| Gene3D | 101 | 305 | 205 | 4.2E-87 | ||
| SUPERFAMILY | 113 | 280 | 168 | 3.92E-6 | – | |
| SMART | 119 | 281 | 163 | 9.5E-24 | ||
| Pfam | 123 | 281 | 159 | 1.6E-25 | ||
| ProSiteProfiles | 304 | 384 | 81 | 23.193 | ||
| SMART | 306 | 379 | 74 | 6.7E-21 | ||
| Gene3D | 307 | 382 | 76 | 2.5E-24 | – | |
| SUPERFAMILY | 308 | 383 | 76 | 1.1E-15 | ||
| Pfam | 309 | 379 | 71 | 4.2E-17 | ||
| SUPERFAMILY | 376 | 602 | 227 | 2.82E-45 | – | |
| Gene3D | 403 | 603 | 201 | 3.0E-63 | – | |
| CDD | 404 | 602 | 199 | 4.30985E-54 | ||
| Pfam | 404 | 599 | 196 | 2.0E-49 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleotide binding | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. | ||
| Molecular function | Magnesium ion binding | Interacting selectively and non-covalently with magnesium (Mg) ions. | ||
| Molecular function | RNA binding | Interacting selectively and non-covalently with an RNA molecule or a portion thereof. | ||
| Molecular function | Phenylalanine-tRNA ligase activity | Catalysis of the reaction: ATP + L-phenylalanine + tRNA(Phe) = AMP + diphosphate + L-phenylalanyl-tRNA(Phe). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Cytoplasm | All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. | ||
| Biological process | Phenylalanyl-tRNA aminoacylation | The process of coupling phenylalanine to phenylalanyl-tRNA, catalyzed by phenylalanyl-tRNA synthetase. The phenylalanyl-tRNA synthetase is a class-II synthetase. However, unlike other class II enzymes, The activated amino acid is transferred to the 2'-OH group of a phenylalanine-accepting tRNA. The 2'-O-aminoacyl-tRNA will ultimately migrate to the 3' position via transesterification. |
Expression pattern of LotjaGi4g1v0259300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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