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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0270300 |
| Transcript ID | LotjaGi4g1v0270300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; TAIR: AT5G15050.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; Swiss-Prot: sp|Q9LFQ0|GT14B_ARATH Beta-glucuronosyltransferase GlcAT14B; TrEMBL-Plants: tr|I3S3R0|I3S3R0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0270300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:63602429..63606677) extracted from Lotus japonicus Gifu genome v1.2.
CCAATATCATAATACCACTCAATTAGTGCTCACAAGGTATCATTACACCACCCCTTTCCCGTTTCTCATTCCGCCACTCA CCGTGACACACTGCGCATTTCACCCTCTTCCCATCACTCTCTGCTGCATCACTTCAGCTCCAACCATGGAAACCATCACC AAGCACCAACAACAACAACAACAACAACAGAAGAAGCGAAAATGGTTCCTCCCCTTAATCTTCTCCCTTCTACTCTCCAC CATCCTCATCCTCCTTTCAATCTTCGTCTCCTCCGATTCCTCCTCCCTGCTCTACCTCTACCGCTCACGCGCCACCCCAG ACCAACCGCACTTCGTCGAGTCCAAGCTGAAACCCTCCACCACTTCACCCATCAACTCTGTTCCCAGGATCGCCTACTTG ATCTCCGGTTCAATGGGTGATGGGGAAACTCTCAAGAGGACGCTTAAGGCCCTTTACCATCCCAGAAACCAGTACGCTGT GCATTTGGACCTGGAGGCTCCTCCTCTTGAGAGATTGGACCTTGCTAACTTTGTCAAGAACGAGCCTCTGTTTGCTCAAC TGGGTAATGTTCGGATGATCGTGAAAGCTAACTTGGTTACCTATAGAGGACCTACCATGGTCACCAATACCCTTCACGCT GCTGCTGTTTTGTTCAAGGAAGGTGGAAACTGGGACTGGTTCATCAATCTCAGCGCTTCTGATTATCCATTGGTTACACA AGATGGTACCCTTTTTTCATCTCATGTTTGTTCTTGACGGGTATAACGATGTAGATTTTTTTGTTGGTTAGTGTTAGTGT GTTTTTTATGGAAATTCATTTAAAATTCGTTATATTTGAGATGGGGATGGATGGATGATTATTCATTGGCTTGGCTGTTT CCTAGTTACCGATTTGGTGTTTGGTGATTTAAATGCTGTTTTGTTTTGTGATGCATTAGTTGAAAGTTAGAAGCTGACTT GCTTGTTTCTTAGTGAGGTTATTGCCAGCTGACAGCTGCATTTTGTTGCTAATTTTGCTTATAGATATATGTAGAGACTT TCTGGATTTGGATTAGTCTGATCTGGTCCCAAATTGTTGTTATTATTACAACATTTGTCAGCAGGAACCCCCCAATTATG CTCTTGTATTGTAGGCCAGGTTTGGAGGGAGGAATGCTGGGTTTCAGATAGAATTCATTGAAACTCCAGTCCACTAGTTT TATTTTTTACTTTGAGTTGACTTTATGTTTGCAAGTGTGTAACCTCTCTGCCATGTGTGTTGGATGGATACCATATAAGA AAAAAATCTAATGAGAATTTTGATGGTTGCTTGTTAACTCCGTTAATTCATTGGAACATAAAAGAGAATTAGGAATGTGA ATCATATTGTCTTGTTTTCACAATCATCCACTGACTCTTTCAATTTACTATGTCTCTTTTGCACAACAGATCTGCTGCAT ACGTTATCATCTGTTCCGCGGCACCTTAACTTCATTGAGCACACCAGTGATATTGGATGGAAGGAGTATGTTGCTGATCC TTTCATCCCTTCTTTTTATTGTATGATTTGTTTGAAATTCAAAAGTAACCTGCAGTTTTATGAAATATAAATGTGTCTTA TCTTGATTAGTAAATCTTTACTGTTTTCTTTTTTCAATAGAGATCAGAGAGCCAAGCCTGTTATAATTGATCCGGCACTT TATAGCATCAATAAATCTGATGTGTTTTGGGTGACAGAGAAAAGAAGTGTTCCCTCAGCATATAAACTGTTCACAGGTGA GAAACCTGGTTTCTGATGCCCTCTCAGCTTTATTCAATCTCTATTTTAATATTTTTCTTCTCGCCAGCTTAATTATTTTG CTCTTTCAAACTTGTAGAATGTTTCAATAGTCTATGAGCCATCTAACCCTTGAATAGATTGAAGATATTTCTAAAACCCA AATAGCTGTAAAAAAGTTCTGGAATGAAGTCAAACAGCCATAATAAAAAGGTAAAAAGAGAGCAATCATAGTGTTGCCAA TCCAATTTATGGACTAACTTCAGTATCCAGTGGTTTTGAGTATGATTACTCAGAATTATAGCACCTTTTCCCTTTTCTCT TTTCACATAATTCTTGGACTCATTATGCCATATGTCATGGGTACTGGTTGGTAATTCTAAAACAGCCTCTGTGTATCCCT TCTCCGTAAATCATTTCATTCTCACATTAGGTCTAATTGCACATGCTCATTCTGGTTCCTTTTTCCTTATTTTGAGTTCT TTTAAACAAGAAGCCATTTGCAGCTAAACTACCTCATGAGATCACCCACTTTACTCGAATCTGTGACATCAAACAAGCTT TTTCAATAGCTGTTTATTACCTGGAAAACTCAAGATCTGGAGATCATAACTTGCAATATCATTAGTCTTGGCTCTGTGCT ATCTATCTGACTTTAATTTTTGCTACCTGATTTTGTTTAGGTTCTGCGTGGATGATGCTCTCTCGCCAATTTGTTGAATA TATGTTATGGGGATGGGATAACTTGCCGAGAGTAGTCTTGATGTATTATGCCAACTTCCTATCTTCCCCTGAAGGGTATT TTCACACAGTCATCTGCAATGCCGAGGAGTTTCGTAACACTACTGTGAACCATGACCTCCACTTCATATCATGGGACAAC CCTCCAAAGCAACACCCACACTATCTCACAATGGATAACTATCAGGGAATGCTGGACAGCAATGCTCCTTTTGCTCGGAA GTTCGGCAGGAATGAACCCCTCTTGGATAAGATTGACAGTGAAATCCTGGGACGAAATGATCATGGTTACGTACCTGGCA AATGGTTCACTCAAGCAAATCCAAACATCACCAAATCGTATTCTTTTGTAAGGAACATCACGGAACTCAGTCCCGGCCCT GGAGCAGAAAGGCTTAAACGGCTTATCAATGGCTTATTATCAGCTGAAAATTTTAAGAACAACCAGTGTGCTTGAAACTC AGGTTCCCAAAACCTGCTATGCTCGTTGCTGTTTTTCCATCAGCTAACAGTTACAACAGGCAAACAGTTGTTATGTCCTC CAGTTGACACTGAGGTTGGTTGCTTTGAGACCAATCATGATATAACAGATTATACAACATAAAGGATAGCTTCTTCGGAG ATACGCGCTGCCCTCGATTTATATTTTTACACTAATTTTAACATGACCCCGAATTTTGAGTCCATATGTATCACTTGTTA TTTCACATGATTCATTAAAATTTTACTGGATGGCTGTGTCAAGTCATCAATGTTGTTCTTGTACTCTTTGGACTGTCTTT ATAGCAAATAATCTTCAGTTATGTAATACAGGGACAGGATACCTGTTAGGTTGGAAGTGCCACAAACCAGTGAAAAATAC TCACCAAAACATCTTATGCAAGTAGCTGGAGTATACCCCTCTTTTCCTTCTTTTTCAGGTAATATACTTCATAAATTCGA GATTTGAAGGCCAACTTCTATATGAATTTTTTTCCTTTGATGTAGACTCTTGCCAATAGGTAAAGGAATTACATTATACT AGCATGTAAGGAGGCCATTTCCTACTGAGCAATCAAATGTAGTTCACCAAAAGGGTCTCACAAGTATCTCATATTTTTAT CTCTCATGACCTAAGTTTATGTATATTAGATCATAGATTTCCAATCAGTAGCTTGATCACAATCTTTACATGAACACAGA CATCCCGGGGGCTATGAATCTAGCTTTTCTACTTGTAAATTAACCTCTCTTCTTCATTAAACTACATTAACGTTGAATTG AAGCTCTTAATTCATAAATCTTATACTCTCAAATTTCTTTTACATTCCGTGTACCTAATTTATTGAGAGAGACAATAACT GGATTCTTTTGTAGGGGAGATCCTACATTTCTTTGCCAAAACCCTTCCATATCGTTCCAAAGCATAAAAGGCACTTAAAC TCAGGCTAAGTTTGTCTACTTGTTGGGGTCAAACCCTATGTTGGCTCAATTTGACAACATAGCTTCCTCCACTTTCATCT CTTAGAATTCAAGATGCCGATATGAATTAACGTTCTAATAAAAGGAAATGTATAAAGCACCACCTCAAAAGTTATGTTGA GATTAACTAAAGATACATTCAATTCAACTTCATTTCTCCAACACCATTAGGTGTTACAAGAGGTTGTGAGACAAATCGCA AGAACAATTCGCTAGTCATATCATCCTTAAAAATAAAACTCGATAAGACATGATTGAAATGTTAAAACAATCGGACGTGA GAATTTATT
CDS sequence (LotjaGi4g1v0270300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAACCATCACCAAGCACCAACAACAACAACAACAACAACAGAAGAAGCGAAAATGGTTCCTCCCCTTAATCTTCTC CCTTCTACTCTCCACCATCCTCATCCTCCTTTCAATCTTCGTCTCCTCCGATTCCTCCTCCCTGCTCTACCTCTACCGCT CACGCGCCACCCCAGACCAACCGCACTTCGTCGAGTCCAAGCTGAAACCCTCCACCACTTCACCCATCAACTCTGTTCCC AGGATCGCCTACTTGATCTCCGGTTCAATGGGTGATGGGGAAACTCTCAAGAGGACGCTTAAGGCCCTTTACCATCCCAG AAACCAGTACGCTGTGCATTTGGACCTGGAGGCTCCTCCTCTTGAGAGATTGGACCTTGCTAACTTTGTCAAGAACGAGC CTCTGTTTGCTCAACTGGGTAATGTTCGGATGATCGTGAAAGCTAACTTGGTTACCTATAGAGGACCTACCATGGTCACC AATACCCTTCACGCTGCTGCTGTTTTGTTCAAGGAAGGTGGAAACTGGGACTGGTTCATCAATCTCAGCGCTTCTGATTA TCCATTGGTTACACAAGATGATCTGCTGCATACGTTATCATCTGTTCCGCGGCACCTTAACTTCATTGAGCACACCAGTG ATATTGGATGGAAGGAAGATCAGAGAGCCAAGCCTGTTATAATTGATCCGGCACTTTATAGCATCAATAAATCTGATGTG TTTTGGGTGACAGAGAAAAGAAGTGTTCCCTCAGCATATAAACTGTTCACAGGTTCTGCGTGGATGATGCTCTCTCGCCA ATTTGTTGAATATATGTTATGGGGATGGGATAACTTGCCGAGAGTAGTCTTGATGTATTATGCCAACTTCCTATCTTCCC CTGAAGGGTATTTTCACACAGTCATCTGCAATGCCGAGGAGTTTCGTAACACTACTGTGAACCATGACCTCCACTTCATA TCATGGGACAACCCTCCAAAGCAACACCCACACTATCTCACAATGGATAACTATCAGGGAATGCTGGACAGCAATGCTCC TTTTGCTCGGAAGTTCGGCAGGAATGAACCCCTCTTGGATAAGATTGACAGTGAAATCCTGGGACGAAATGATCATGGTT ACGTACCTGGCAAATGGTTCACTCAAGCAAATCCAAACATCACCAAATCGTATTCTTTTGTAAGGAACATCACGGAACTC AGTCCCGGCCCTGGAGCAGAAAGGCTTAAACGGCTTATCAATGGCTTATTATCAGCTGAAAATTTTAAGAACAACCAGTG TGCTTGA
Protein sequence (LotjaGi4g1v0270300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
METITKHQQQQQQQQKKRKWFLPLIFSLLLSTILILLSIFVSSDSSSLLYLYRSRATPDQPHFVESKLKPSTTSPINSVP RIAYLISGSMGDGETLKRTLKALYHPRNQYAVHLDLEAPPLERLDLANFVKNEPLFAQLGNVRMIVKANLVTYRGPTMVT NTLHAAAVLFKEGGNWDWFINLSASDYPLVTQDDLLHTLSSVPRHLNFIEHTSDIGWKEDQRAKPVIIDPALYSINKSDV FWVTEKRSVPSAYKLFTGSAWMMLSRQFVEYMLWGWDNLPRVVLMYYANFLSSPEGYFHTVICNAEEFRNTTVNHDLHFI SWDNPPKQHPHYLTMDNYQGMLDSNAPFARKFGRNEPLLDKIDSEILGRNDHGYVPGKWFTQANPNITKSYSFVRNITEL SPGPGAERLKRLINGLLSAENFKNNQCA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | - | – | |
| PANTHER | 10 | 427 | 418 | 2.4E-237 | – | |
| PANTHER | 10 | 427 | 418 | 2.4E-237 | – | |
| TMHMM | 20 | 42 | 23 | - | – | |
| Phobius | 20 | 41 | 22 | - | – | |
| Phobius | 42 | 428 | 387 | - | – | |
| Pfam | 82 | 336 | 255 | 6.9E-72 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of LotjaGi4g1v0270300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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