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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0284000 |
| Transcript ID | LotjaGi4g1v0284000.2 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Plasma membrane ATPase; TAIR: AT3G42640.1 H -ATPase 8; Swiss-Prot: sp|Q9M2A0|PMA8_ARATH ATPase 8, plasma membrane-type; TrEMBL-Plants: tr|V7CCB3|V7CCB3_PHAVU Plasma membrane ATPase; Found in the gene: LotjaGi4g1v0284000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:65620202..65624829) extracted from Lotus japonicus Gifu genome v1.2.
CTAGCTAACAAGGAGTCATTTTGCAGGTGTTGAGGGATGGAAAGTGGAGTGAGCAGGAGGCTGCAATATTGGTGCCAGGA GATATTGTCAGCATCAAATTGGGAGATATCGTCCCAGCTGATGCTCGTCTCTTGGAAGGAGATCCCCTCAAGATTGACCA ATCTGCCCTCACCGGTGAGTCCCTACCTGTAACTAGGAACCCTGGTGATGAGGTTTTCTCTGGTTCCACCTGCAAACAAG GTGAGATAGAGGCTGTTGTCATTGCCACTGGTGTGCACACCTTCTTTGGCAAGGCTGCACATCTTGTGGACAGCACCAAC AATGTTGGTCATTTCCAAAAGGTACATCATTTTTTTACTCCCCTAAGCTCTATTCTATCGTAGCCGCCAGTTTAGGATTT TTGTCGCAGTTATTAAGAAACTGTATTAATGTTCTTGCTTTTATTAAAATTATTACCTAACTATGTAACATATCCTTTAT CTCTTTTATTAATTTTGACTCCTCAATGTTTCTATCACCATTAAGAATTATTGAGAAAAGGGTATAAAGTAACAAAGGAG TAAGCTTTTGTAAGTGATTCTTAATTGGTTTCATAGTTTGATAACTTTGAAAAAATCATTTCTTGATTGGCTTCTATTAG GTTTTGACATCCATCGGAAACTTCTGTATCTGCTCAATTGCTTTGGGAATGTTGATTGAGCTTGTTGTGATGTATCCCAT TCAAAGGAGGGCATATAGAGAAGGTATTGACAATTTGTTGGTTCTTCTCATTGGAGGTATCCCAATTGCCATGCCAACAG TGTTGTCTGTGACCATGGCTATTGGGTCTCACCGTTTGTCTGAGCAAGGAGCCATCACCAAGAGGATGACAGCCATTGAA GAGATGGCTGGGATGGATGTTCTCTGCAGTGACAAGACTGGAACTCTCACCCTTAACAAGCTTACTGTGGACAAGAACTT GATTGAGGTTAATCACCAATCTTAAATATTAGTGATAACGAATGAATGCTTTGCATTAGTCGGTCTCATCTTGTGAACCT TTTAAGTACATACATTGCAGATTGCATGCATAGATATTTGAGAACTTGTTTGGATGCAGACTAAAGAACACTTATTGAAG CTTATCTGGTGTTTTTTTAGTAGATAACCTTCAATAAATGGCCTTTGACCGTATCTAGACAGACTCTTTATATTTGGTAT AACAACTTTGATATCTTGGCATGTTTGAAGTGATGTCCTTGCAACTAGCAACCATATATTTTTACATTTGCATATATGAA ATTAAATTAGTTTTGTATCTACTTGAACAACTTACCAGGTCTCTTACCACTATTAAATGTAGCTTAAACTTAAAAGATTG GTAGCATGGAAGAAGTTGCATTTGCTCCAAAATCTTCCTTCTTCCTAATCAGGGTTGTTTGTGAGTGCAGGTGTTCCCCA GTGGTATGGATAAGGACACTCTTCTCTTGCATGCTGCCAGGGCTTCTAGAGTTGAAAACCAAGATGCCATTGATGCTTCA ATAGTTGGGATGTTGGGCGACCCCAAGGAGGTACTAATATTTAAATTGACATTCTTTCATGAACCACTTAGTCTTGAGTC AACATTAAGCATTCGAAGAAACTTTTTTAATTGGACTATGTTTTGACATCTTAGGCAAGAGAAGGAATCACTGAGGTGCA TTTCTTGCCCTTCAATCCTGTGGATAAGCGCACAGCAAATACCTACATTGATGGCGAAGGCAACTGGCACAGAAGCAGCA AGGGTGCTCCTGAGCAAGTAAGGATATGCTGATATGCATCAACATAATAACATTTTGATCACTATGACTTAGCTATACTA TGTAACAACTAACATGTATTACTTATGATATATGACTAACCATTTTATATATCAGATTATTGAGCTTTGTGGCCTCAAAG GAGAAGCTTTAAAGAAGGCGCATAACATCATTGATCAGTTTGCTGAGAGGGGTTTGCGTTCATTGGCTGTTGCATACCAG GTGAATAAAGGGTCTAATATCATGCATTGTAATCTTTTGTCCTCAAACTGTGTCATATTCTTCCTTCCACTAATAAAGTT TTGACATGTCAATTAAAAACGACCATGAAAGTTTGTAACTGTGGTAAAATTTCATGGTAAATTGTGAGACCATTTATAAT ATAGAGGCCATGAATTTACAATTGGAAAGAGAAAGGAGGAAATTAACTTGCAATTTTTTTGCACTTTCGTGCAGACTGTT TCAGAAAAGTCCAAGGAGAGTGCTGGAGAAACATGGGTGTTCGTAGGCCTTTTGCCACTCTTTGACCCTCCAAGGCATGA CAGTGCAGAGACTATTCGTCGTGCTCTTGATCTTGGTGTCAATGTTAAGATGATCACCGGTGACCAACTTGCTATTGGGA AAGAAACTGGTCGCAGGCTTGGAATGGGAACCAACATGTATCCTTCATCCTCCCTTCTTGGTGAGAACAAGGATGCTGCC ATTGCATCAATCCCAATTGATGAACTCATTGAGAAGGCTGATGGATTCGCTGGAGTATTCCCTGGTAATGAGATGAATCT ATAATATGTTTGGATCATCTTTTTTTCCCCAAAATCAATTCTAGCACACAAAAGCTGCTCATAAAGTTTTATCCCCATAA TTGATTTTGTCTTTAGAATCAATTGTAGGAGAATTTCTAAACACACACTAGTTCATGTTAAAGTAACTAAGCCCCATAGG AAAACAAAACCTGAATTTTCACATGTTCCTTGCAGAGCACAAATATGAGATTGTCAAGAGGTTGCAGGAGATGAAACACA TTTGTGGAATGACCGGAGATGGTGTGAATGATGCCCCAGCACTGAAGAAAGCAGATATTGGAATTGCAGTGGCTGATGCT ACTGATGCTGCCAGAAGTGCCTCAGACATTGTTCTGACCGAGCCGGGACTAAGTGTGATTGTGAGTGCTGTATTAACCAG CAGGGCCATCTTTCAGAGGATGAAGAACTACACAATCTATGCTGTTTCCATCACAATCCGTATTGTGTTTGGATTCATGC TGGTAGCTCTAATATGGAAATTTGACTTCTCACCTTTCATGGTCCTGATCATTGCTATCTTGAATGATGGAACCATCATG ACCATTTCCAAGGATAGGGTGAAGCCATCCCCTTTGCCTGATTCATGGAAACTCAAAGAAATATTTGCCACTGGAGTTGT TCTTGGAGCTTACATGGCCCTCATTACTGTGTTGTTCTTCTATTTAGTTCATGACACCGATTTCTTCACTGTAAGTAATC CTAACCCAACACTTTAGCTCCATACCACTCATCATAAAAGGAAAGTGATTTATAGACATCCGTATAGTACAAAAACTCAA CACACATCCAAAGTGAGAAAGTAAGAGAATGTGATAAGAAGTGAGAGATATAGAGAAAGTCAAGTATTGTTACTGATTAT AGAATTATGACATGACATGTAACTATGTTCCTTGTTGTTCTTTCAGGATGTTTTTGGTGTTAAGTCAATTGCAGAAAGTG AGGAAGAGCTTAACTCAGCTCTCTACCTTCAAGTGAGTATAATTAGTCAAGCACTCATCTTCGTGACCAGGTCAAGGGGA TGGTCTTATGCTGAACGCCCTGGCGTGTTACTTATCACAGCCTTCTTTCTTGCACAACTGGTTAGTTTCTTTCTATTTTT GAAAACATGGTTCCATAAAGAGTCATCATCACTACAAACATATCTGGTTTTAATTTGATTACTTCTTAAATTAGGTGGCA ACTATCATTGCTGTGTATGCACATTGGGACTTTGCTAGAATCCATGGAGTCGGTTGGGGTTGGGCAGGAGTAATCTGGAT CTTCACCATTGTCACCTATATCCCTCTTGATATCATCAAGTTCCTGATCCGCTTGGGATTGTCAGGAAGGGCTTGGGACA ACATGATAGATCACAAGGTCTAACAAACATTCTTAAATCACCAAAATATCATTTTTTTTAGTCTTTTGCTATATGCTCAA ATAAGTTTCTGTTGAACAAGTGGTGGTTGGTTTAAGTAGTACATACCCGATTCCGTTTTAGTAAGATTTCGGTTCGAGTC ATATGAATAAAAAAGCTCTCCCGCTGGAAGAGTTAGCTCCACCAGGATGTGAATGTTTATAACTCGAATCGAATTGTCTC ACCTGTGGTGAATGCAATTTTGTTGTTGTTGTTGCTCACTACAATGCATTATTTCGTGTCTATTGATGCAGACTGCTTTC ACAACAAAGAGTGACTATGGAAAGGGAGAGAGGGAGGCTCAATGGGCTGTGGCTCAACGCACCTTGCATGGTCTCAAAGT TGAAGAAGCTCACTTGAACAACCACCACCATGAACATTCTGAAATCGCTGAGCAGGCTAAACGACGCGCTGAGGCCGAAA GGTTCAGCACCCCAAACTTAACTTCAAATGAATTGCATCAAATGATATGATAGTTTTGGATTATTAAAATTTAGTCTGGC GAATTTTAATCTAATGTGGTGATATTTATTTTGATGGATGAACATTTTCAGGCTCAAAGAGCTCCACACACTCAAGGGAC ATGTTGAATCTGTGGTGAAATTGAAGGGTCTTGACGTTGATACCATCCAACAACACTATACAGTCTAA
CDS sequence (LotjaGi4g1v0284000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTGATTGAGCTTGTTGTGATGTATCCCATTCAAAGGAGGGCATATAGAGAAGGTATTGACAATTTGTTGGTTCTTCT CATTGGAGGTATCCCAATTGCCATGCCAACAGTGTTGTCTGTGACCATGGCTATTGGGTCTCACCGTTTGTCTGAGCAAG GAGCCATCACCAAGAGGATGACAGCCATTGAAGAGATGGCTGGGATGGATGTTCTCTGCAGTGACAAGACTGGAACTCTC ACCCTTAACAAGCTTACTGTGGACAAGAACTTGATTGAGGTGTTCCCCAGTGGTATGGATAAGGACACTCTTCTCTTGCA TGCTGCCAGGGCTTCTAGAGTTGAAAACCAAGATGCCATTGATGCTTCAATAGTTGGGATGTTGGGCGACCCCAAGGAGG CAAGAGAAGGAATCACTGAGGTGCATTTCTTGCCCTTCAATCCTGTGGATAAGCGCACAGCAAATACCTACATTGATGGC GAAGGCAACTGGCACAGAAGCAGCAAGGGTGCTCCTGAGCAAATTATTGAGCTTTGTGGCCTCAAAGGAGAAGCTTTAAA GAAGGCGCATAACATCATTGATCAGTTTGCTGAGAGGGGTTTGCGTTCATTGGCTGTTGCATACCAGACTGTTTCAGAAA AGTCCAAGGAGAGTGCTGGAGAAACATGGGTGTTCGTAGGCCTTTTGCCACTCTTTGACCCTCCAAGGCATGACAGTGCA GAGACTATTCGTCGTGCTCTTGATCTTGGTGTCAATGTTAAGATGATCACCGGTGACCAACTTGCTATTGGGAAAGAAAC TGGTCGCAGGCTTGGAATGGGAACCAACATGTATCCTTCATCCTCCCTTCTTGGTGAGAACAAGGATGCTGCCATTGCAT CAATCCCAATTGATGAACTCATTGAGAAGGCTGATGGATTCGCTGGAGTATTCCCTGAGCACAAATATGAGATTGTCAAG AGGTTGCAGGAGATGAAACACATTTGTGGAATGACCGGAGATGGTGTGAATGATGCCCCAGCACTGAAGAAAGCAGATAT TGGAATTGCAGTGGCTGATGCTACTGATGCTGCCAGAAGTGCCTCAGACATTGTTCTGACCGAGCCGGGACTAAGTGTGA TTGTGAGTGCTGTATTAACCAGCAGGGCCATCTTTCAGAGGATGAAGAACTACACAATCTATGCTGTTTCCATCACAATC CGTATTGTGTTTGGATTCATGCTGGTAGCTCTAATATGGAAATTTGACTTCTCACCTTTCATGGTCCTGATCATTGCTAT CTTGAATGATGGAACCATCATGACCATTTCCAAGGATAGGGTGAAGCCATCCCCTTTGCCTGATTCATGGAAACTCAAAG AAATATTTGCCACTGGAGTTGTTCTTGGAGCTTACATGGCCCTCATTACTGTGTTGTTCTTCTATTTAGTTCATGACACC GATTTCTTCACTGATGTTTTTGGTGTTAAGTCAATTGCAGAAAGTGAGGAAGAGCTTAACTCAGCTCTCTACCTTCAAGT GAGTATAATTAGTCAAGCACTCATCTTCGTGACCAGGTCAAGGGGATGGTCTTATGCTGAACGCCCTGGCGTGTTACTTA TCACAGCCTTCTTTCTTGCACAACTGGTGGCAACTATCATTGCTGTGTATGCACATTGGGACTTTGCTAGAATCCATGGA GTCGGTTGGGGTTGGGCAGGAGTAATCTGGATCTTCACCATTGTCACCTATATCCCTCTTGATATCATCAAGTTCCTGAT CCGCTTGGGATTGTCAGGAAGGGCTTGGGACAACATGATAGATCACAAGACTGCTTTCACAACAAAGAGTGACTATGGAA AGGGAGAGAGGGAGGCTCAATGGGCTGTGGCTCAACGCACCTTGCATGGTCTCAAAGTTGAAGAAGCTCACTTGAACAAC CACCACCATGAACATTCTGAAATCGCTGAGCAGGCTAAACGACGCGCTGAGGCCGAAAGGCTCAAAGAGCTCCACACACT CAAGGGACATGTTGAATCTGTGGTGAAATTGAAGGGTCTTGACGTTGATACCATCCAACAACACTATACAGTCTAA
Protein sequence (LotjaGi4g1v0284000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLIELVVMYPIQRRAYREGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSEQGAITKRMTAIEEMAGMDVLCSDKTGTL TLNKLTVDKNLIEVFPSGMDKDTLLLHAARASRVENQDAIDASIVGMLGDPKEAREGITEVHFLPFNPVDKRTANTYIDG EGNWHRSSKGAPEQIIELCGLKGEALKKAHNIIDQFAERGLRSLAVAYQTVSEKSKESAGETWVFVGLLPLFDPPRHDSA ETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGENKDAAIASIPIDELIEKADGFAGVFPEHKYEIVK RLQEMKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITI RIVFGFMLVALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGAYMALITVLFFYLVHDT DFFTDVFGVKSIAESEEELNSALYLQVSIISQALIFVTRSRGWSYAERPGVLLITAFFLAQLVATIIAVYAHWDFARIHG VGWGWAGVIWIFTIVTYIPLDIIKFLIRLGLSGRAWDNMIDHKTAFTTKSDYGKGEREAQWAVAQRTLHGLKVEEAHLNN HHHEHSEIAEQAKRRAEAERLKELHTLKGHVESVVKLKGLDVDTIQQHYTV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 666 | 666 | 0.0 | – | |
| PANTHER | 1 | 666 | 666 | 0.0 | – | |
| Gene3D | 1 | 88 | 88 | 1.2E-9 | – | |
| TIGRFAM | 1 | 550 | 550 | 4.7E-238 | ||
| Phobius | 1 | 22 | 22 | - | – | |
| SUPERFAMILY | 5 | 589 | 585 | 5.36E-50 | ||
| Phobius | 23 | 45 | 23 | - | – | |
| TMHMM | 23 | 45 | 23 | - | – | |
| Phobius | 46 | 390 | 345 | - | – | |
| SFLD | 55 | 384 | 330 | 0.0 | – | |
| SFLD | 55 | 384 | 330 | 0.0 | – | |
| SUPERFAMILY | 69 | 379 | 311 | 3.63E-38 | ||
| Pfam | 69 | 346 | 278 | 5.2E-16 | – | |
| PRINTS | 73 | 87 | 15 | 3.3E-35 | – | |
| ProSitePatterns | 75 | 81 | 7 | - | ||
| Gene3D | 89 | 232 | 144 | 6.4E-43 | ||
| PRINTS | 189 | 207 | 19 | 1.6E-59 | ||
| PRINTS | 227 | 238 | 12 | 3.3E-35 | – | |
| PRINTS | 249 | 259 | 11 | 3.3E-35 | – | |
| PRINTS | 304 | 320 | 17 | 1.6E-59 | ||
| Gene3D | 304 | 589 | 286 | 3.6E-108 | – | |
| TIGRFAM | 307 | 418 | 112 | 1.7E-28 | ||
| PRINTS | 332 | 348 | 17 | 1.6E-59 | ||
| PRINTS | 332 | 351 | 20 | 3.3E-35 | – | |
| PRINTS | 355 | 367 | 13 | 3.3E-35 | – | |
| PRINTS | 363 | 388 | 26 | 1.6E-59 | ||
| TMHMM | 391 | 413 | 23 | - | – | |
| Phobius | 391 | 413 | 23 | - | – | |
| Phobius | 414 | 418 | 5 | - | – | |
| Phobius | 419 | 436 | 18 | - | – | |
| TMHMM | 420 | 437 | 18 | - | – | |
| Phobius | 437 | 455 | 19 | - | – | |
| TMHMM | 455 | 477 | 23 | - | – | |
| Phobius | 456 | 477 | 22 | - | – | |
| Phobius | 478 | 500 | 23 | - | – | |
| Phobius | 501 | 518 | 18 | - | – | |
| PRINTS | 504 | 525 | 22 | 1.6E-59 | ||
| Phobius | 519 | 529 | 11 | - | – | |
| TMHMM | 529 | 551 | 23 | - | – | |
| Phobius | 530 | 551 | 22 | - | – | |
| Phobius | 552 | 562 | 11 | - | – | |
| TMHMM | 561 | 580 | 20 | - | – | |
| Phobius | 563 | 587 | 25 | - | – | |
| Phobius | 588 | 691 | 104 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleotide binding | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. | ||
| Molecular function | Proton-exporting ATPase activity, phosphorylative mechanism | Enables the transfer of protons from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) -> ADP + phosphate + H+(out). These transporters use a phosphorylative mechanism, which have a phosphorylated intermediate state during the ion transport cycle. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Proton export across plasma membrane | The directed movement of hydrogen ions (protons) from inside a cell, across the plasma membrane and into the extracellular region. |
Expression pattern of LotjaGi4g1v0284000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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