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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0287300 |
| Transcript ID | LotjaGi4g1v0287300.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Fatty-acid desaturase; TAIR: AT4G30950.1 fatty acid desaturase 6; Swiss-Prot: sp|P48628|FAD6C_SOYBN Omega-6 fatty acid desaturase, chloroplastic; TrEMBL-Plants: tr|I1JGN9|I1JGN9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0287300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:65965565..65975195) extracted from Lotus japonicus Gifu genome v1.2.
CACGAACAAACACTTGCTCAGCTCTCTTCTTCTATCACATGTAATGATGTAAACCACATTGGTCCAATTCAAGCCACGAC CCTTTTCTGCAAATCCGAAAGGGAAAAGATAAACAAAACAGAGTTATCTTTCCCTGTGGCTTATTCCATTCCATCCCACT GAGCCCAAACCTTAATTTCTGCTTACAATGGCTTGCACGCTCGCAGATTCATTGCTACTATTCAAGGTTCTCATTTTCCC TTTTTTCTCTTGTGTTTTTTTCTATGTGAATTTTGAAGTTTGAAGTGCTGTTATTGTCTTGTCTTACCATTGTTTGGTTT TTTAGGGCTCTCAGCAGAAGCCAGCTCTGAGGAGGAGCATTGCTGCCCAGTGTTCACCCAGTAAGTTTTGCGTGCATGTT GTTGGCTTATACTCTCATTTAACAAACCCATTTGTTTAAGTTCACTATTGTATTCATTGCAAATTGCATTTGTTTTGTTG GTCATTGTGGCAATTGAGTTCAAGGGGTTGGAACCTGGAAGGAGAGTGCTTGGATGGTGAGAACTGAGAAATTAAGAAGC ATCTAACACTTCCTGGGTTCAATGCAAGCAACTTAAATTGGAATTTGAATTCTATTCTAGCTATAGGTTAATGACTTTGT GTAAGCTACAAAGGCTTCTTCCTGTTGTGTTTATGAATGTGATGAAATCATGAAAATGACCTAGAAGGTTCCAGATATGC CAAACGGTGTCTTCTGCTACAATGTTAGCTTGTCCTTAACAACATTTATAAATTATTAAATTATATTACTTCTGGAGCCA ATTTTCATAGAGTGATTAAATTCACATTTTGTTTTCCCAACCACAAAAGCTAGCTGTGCAGTTACCTGGTGGTAATGTGG TATCACTGATTAGTATTACTAAGTCCTTTGAATAGGGATTTCCTGCACCAAGTTGCTTATATGTACCTTTTTTTGTGGAA GAGTTTAAGAATGTTTTAATACATGGGTCTTGCCCTCAGCAAATAGTACTGTGTAACAAATTTGGAGCTTTAGCTTAACT TTTAATGGGCATGAATGATATGGAAGCCTTTTTAATAACTAACTGTCATCCTCCACACTCCACAGGCATATTTAATATAA AGGTTGATGGGCTTATCCATAAAGGGTTCAGGCATCAAAGACATTTAATTCCTAGGAATAAAGTTGCTGTCATACGAGCT GTGGCAATTCCGGTAGAACCAGCTCCAGCTGAAAGTGCGGAGTACAGAAAACAACTAGCCGAAAGCTATGGTTTTAGGAA AATTGGAGAGGATCTTCCAGACAATGTCACTTTAAAGGATGTCATCAGTTCCCTTCCTAAGAAGGTGATTTTTCTTAAAA TATATGTCATGTATGATTCTTCTATCTTTATGCCAATAATATCTTCTGCACATTGTGAGAAAGAGAATCTGTCAAGGTCC ATGTATGATTCTTATATCTTTATGCCACTTCATATATAATCGATGATCATGATGCATATTTTTTTTTCTTGATATTTTTT AAGGTCTTTGAGATTGATGATGTTAAGGCATGGAAAACTGTTTTGATATCTGCCACTTCCTATGCTTTGGGGCTTTTTAT GATTTCCAAAGCACCCTGGTATCTACTTCCTCTGGCTTGGGCATGGACGGGAACTGCAGTAACTGGGGTTAGTTTGATAT GCATATTTTCCTTATGGTTATTCCTTACCGGTTTCACAAATCCTTCTCATTCCTGTCTCTCAACAACTTTTCCCCCCTTA AAGCCTTATTTTTTTGTTCAAGTTTTGAGATCCTCTTTCCTTTTTTTGCATACAGTTCTTTGTCATTGGACATGATTGCG CTCACAAATCATTTTCAACGAACAAATTGGTAGAAGACATTGTTGGAACTCTGGCCTTTTTGCCACTTATTTATCCATAC GAGCCGTGGCGGTTTAAGCATGACAAGCACCATGCAAAAACAAATATGTAAGCAGTGTTTCCTTCTAGTTTGTTTTTCTA GGTGCATCTTGTACACTATCTGTAGCATCAAAATCCGATGTAGAGGGTCTGGCTAATATTTCAATTCAATGTGGTGCAAA ACATAGTTTTTGTTCTCAAATCAACCCTTACAAATTTATATTTGAAATGGATTAGACAATGAAAGAAGTTTAGAAGATTT TCAGTAGACTAAAGTTGATTGTGGTGTGTTGGATCATTTTGTTGCATGATGTGATATTTCTTTTTCCAATATACATGCAC ACTGTCCCACAGTACCCGAAGTCAGGTGGTACTAATGCTGAAAGCGTACAATACAGGCTATATATACAGTATACATAAAC TGTATGAGATATGTAATGATAACATCCATGTTATAGACTGAAGCAGTAGCTTTGTTGTTTCATTACTTTCAACTGTAAGG CATCTCTATTGTCACAGGTTGAATGAAGATACTGCTTGGAACCCTGTTTCGAAGGATGAGTTTGACTCAGATCCACTTTT GAGGAAAGCAATAATATATGGATATGGTCCAATTAGATGTTGGATGTCTGTAGCTCACTGGTATATTCAACTATTCCTTG AAATATCTTTATACAGTTCCTCAAGTAGCACTTCATTAGCTTGAGTAGCCAGGATTTCATATGTTATGGCCTCTAGTTTA TGCTGAATCTTGATATCAATGTGCATCCTAACAGGTTGCTGTTGCACTTTGATTTGAAGAAGTTCAGACCAAATGAAGTA AAGAGGGTGAAGATAAGTTTAGCTTGCGTTTTTGCTTTTATAGGAATTGGATGGCCATTAATTATTTACAAGACTGGAAT CATGGGATGGATAAAATTCTGGTTGATGCCATGGTTGGGCTACCACTTCTGGGTAATTTTACTTCTTCCACAGATATTGA TATTTTGTTCATCACACCGTTGGTTATGTTGATTTTGTTTCTATATATATATTTTTGGATGATTAGTGGTGACTGTATAT TTAGTCAGGGGGGAGATGTAGTCAATAATCAGCCATTGGATCAAACTTCTGATTTATGTTTTTCATTTAGTATTCTTTAG AAGTTAGTGCTTGGCTTGAATGGATATATAAAACTATCTATCAATTTTAGGGAATGAAACAATACCAAAGTATAACCATG CAGCCAGAAAATTGAGGGCAGTGTAAACGTTATAGGCCAGGGCTGGATGGAGGAGGCCCAGCTGGGGCACTGGCCCCTCC AAACCATGGTTTTACACTTAACTAGTATTTTATACCCAGTATAATTTTAATGAAAAATAGCCAGTGTAGTCACTAAATTT GTATTAAATTGGATTGTTCTATCAATTTGGAAATGAGTTTTCAGTCTAAATGTAAGAGATATAAATAAGTAATAAGAAAA AAATTTAACGAAGTTGGTAACATATTGACAGGAGTGAAGAAGATTATTTTCAGTGTAAACTTGGATGAGTATGCTGTATC TTAATGTATCAAGCAACTCAAGGCAAATGAATGAGTCTAGAATTAATACCCAGAACATAAAACCAACTTCCCTTTGTTCA TTGAAAATGTTTACAATGACTTAATCATAGATGAAATTTATTGTATGAGAGCGTTGTGTTCAAAGTTTGTCATTGAAGTA TCTTGACTTTTATATTTGTAGCCCTATTGGTTTTAACTTTAATAATATATACTTGCACATTTTATTAGTTTAAGAGAAGT TTATTGGCCTATTTGTAGGCTTTCATGTATTATAAGCCTCTAAATAGGTTCTCGGGTTAGGTCAGTATTTTAAGTTTTCA GAGACGTGCCTAAAATATAGCCTATGATGGGTAACATGCTCGGCGTAGCCTAAGCCTAGCCTATTTCAACCACTAGTTAC ACCATCATGGTTTTTTGTATAATCTTTCAACAGGTCTTTCATTTGTTACCATATGTAGCAATCGTGCTGACTTATTAATC TCTATTAATTTAATTATATTCCCCCCAAAATGCTGAGGGCCGTGGCCGGATCTGAATTTTCTTGATGCTATTAATACTCT GGTCATGTATCTAAGAGGTGCTTTTTGACATTCATAGATGAGTACTTTCACCATGGTACATCATACTGCACCACACATAC CATTCAAAGACTCAGAAAAGTGGAATGCTGCTCAAGCACAGCTAAATGGAACTGTTCATTGTGATTACCCTCAATGGTAA AATATATTTTTTCTGCTCCTTTCATTTTTGCCTGTTCTTTCCAATACTTTTTCTTTTTTTGTCTAAAATTCATGTGGTTC CAACCAATTTAGAGTGAGACCTATATAATTTAGTGGACATGAATTTCACCAAACAGAAAAGAGTGTCGGAAAAAGTGTAT TGGAGTGAGTGTTGGCAGCATTTCCCTTTTCTTTTGTTACTTTTCTGAAGACGACTGATCTTCAATTCTATGAATATTTT TGCATAACTTATCTGTCTTTCCCTACCTAATCCTTGTGTGCGCACCAGTGTTATGGATAAGGAAAATGTTTGCTGATGCG AATAGTGATTCTTAACTTCTGTTCAAATGGTTAGTTACACAAAAAAAAAAATCACCTTTTTATCTTTCTTTCACCTTTTC CTCATCCTTCCACCCTTTCCCCCCTACTTGTTTTATATTTTTCTGTTTCTTCTCGCACTCATTCGCACCACTCTTCTTGT ACTTAGTAGCATTCTTCTATGGGAAAAGGCCAAGAAAAAATAATAAAATAGAAAAAAAGGATCTTTATATTTCAACAATG ACTTCATAGGATGATTTTATCTGAAAGTACAATCAGTAATTTGTGTATTGCAATTGTAGATCTTATTTGGTGTGAATATC TTTACAAAGTGCTTGCATATTATATTATACGTGCAAATCTATCATTTATGAATGCCATCCCAGGTTGCTATTATCAATTC ATTTATAAATCACAATTGAAATGTTTAATGCTTACAATTTCCTGATATCAATATAAATCTCTCCTGTTGGTGAATATTTT TAATTTAAAATCATCTGATTCTCCGTATGTTACACCCCATGTGCATTGCCTCACATTTATGAAGCTATAAACAGTTTTTT TTTTTGTTTTCCCCTGTTCTTCCTGTGTTATCTTCAAAATGCAGGTCTGCAAAATTAACTTGATAGCCATAGGATTGACT AACTTGAATATTCTCAATTCTTTTTTGAACAGGATTGAGATTCTATGCCATGATATCAATGTCCATATTCCACATCACAT ATCCCCAAGAATACCAAGCTATAATTTACGAGCAGCCCATAAGTCTCTCCAAGAAAATTGGGGAAAGGTAAGATCAATAA TGTCAATATCTTTTTTCTGCTTGTTCATTTCTAGTCTTTTGTAGTAATGAAAATATTAAAGCATATTTGCTTTGCCACTG AAACTTCTTAAGATATAGTCCAAAGAAAAAGATTTGTAAGTGTTGTTTATTCCAGTAATACAATTCTGTTCTTGTTTAAA CAGTTAATCAGTTCTAAACATTATGAAGTCCAACTAAACCCCCAGTTCCATATGGTTAAAAGAGTAGTAGCATTGTTGCT AATGATTTTTATCTTAATTTGTTGTGTTGGATTAACAGTATCTGAATGAGGCTAGTTGGAATTGGCGATTGATGAAGACA ATCATGACGGTGTGCCATGTGTATGATAAGGAGCAAAATTATGTTGCCTTTGATGAACTTGCCCCTGAAGATTCTCAACC AATTAAATTTTTGAAGAATGTCATGCCTGATTATGCTTAAGTTGATCTGAGCTGGCTTATTCTTGTACCAATATCTGTGT CAAAGTAGGTAGGTATGCCATTCATTTTCCTTTTACGCGTTCTATCATGGTTCTATTTTTTAATTACTTATAACAAGGGA AGATTGCTAGGGTCTCTCTTAAAGTTCAAGTTCTAGGGTAATCATATTATGAAGTTGCGGATTGTCCAAAGCCAAGCCCC TGAGAAGCATTCATTAAGGTTAAAGTAGATGTTATAGATTTACTTTAATCTGAACAGCGTGATTCTTGTTAGATTGTCAC GTTGAAGCAACATTATATTATGCATATACAGTTGTCTAACGGATAATATAACACGTGGAATGTGATGTTTTGAGCTGAAT GCCTTGTTCTGAGTACTGACACTGTTTTCTTATTGATGGGGTATCTTTTATTTCTACATGGCTGACAGTGTAGTATTTAT TTGCTTTCTGGTCTAAAGAAAAAGTCTTTCTGCAACCATAACTGTTTGCAAACTTCAAAGTGGAACGATCTTCAAAACAT AAACAAGTATTTAATTGTGGAAAGGCCTTGAGTTTGAGAGCCCCATCGATCTTGTTGTTTTCTGCTACATAATCTCCAAG TTTGATTAAATTAATATTTAGAACTTAGATATGGAAGAAAGTGGTCTGGTTGGTTACACCACCCGTTATCATATCTAATA ATAACTCGAGAACTTGGATTTAAAGGATGGTTTTGATGAATTTGGTGCAGCTGAAAGAGTTCCATGTATATTTTTATGTG ATATTAATAGGGAAGGTAAAGTTACCTAAAAGCTGCAACCCACCTCGCCCACCAGGGACACCTTTAGCTGAAGAAATTCT ATTCAAAGTAAATCTTTAAGTTAGGGCGTTTACAACTTACAACTGCTCACATGCAAAGGGAATTTTAATTATTCCCTTCA TCCTTCTAAGGCTAGTAAAGGTACTCACCACATTTACTGGTCCACCATGATATTGTAAAAGGAAAAGGTCAAAAGAAGGT AAAGAGGATATGACCATCTAAATGGCAAGTTTATCTTCACACCACACTCAAGAGAGAAAAAGAAGAAATGAGAGATATAA TGGGTAATGTGATAGGAAAAGGAAATGCATGCATGTACGGTTGTGGTGACATACAATTCAAAATACAGTCACTCCATAAG CTACACATAGCATGTTTGGATCAGCTTCTGTTTTTTAAAATCGATTCTGTCACTTGGGAGATACTTACATGACATAGGGT TCTTCACAGAATTATTGAAAGAGACAAAATAAATGAGGGCTGAGGCCAACATTTAGAATCAATTTAAGATCTGAAGTGAT GTATATATGAAATCTGATTCTGTAGTGAAGGAAAATAAGCAATCCTTATATAATCTTCTCTGTTGATATGCACAAACCCC ATTACACCTTTAAGCTATAGTAGTGGTAAAGCTACAATACAATTATACAATGTATGCCAGGTTAAATACTACTCAATCTC GTGTATATACAAGGTCTAGACTCAGCACTATATAGTAAATTGCAGAAGCAATCTGGTTATGGGAAAACTAACCATAAAAA CTAAACAAGCTGTTGTATAAACTAAATCATATGATTGGAGGTGTTGGAGTCTCCCATATATCAAACACATTCTCCTCACT ATGAAGCGCGAAAAGCCTATCCCCTCCAATGGAAAAGTCACATATCGAACCACCATAGCTCCGCCGGAGCCTGGACGTCA AAACCCACTCAGGGCCACAGAACACAGAAATGCAATCATTCATGGAGGAGAAAAGTTGTCCTCCATGCAAAGCCAATTTA GGGTAACATGGTTCCTCAGGCATCTTCCCCTTCATCAACCTACTCCTGGAGCTCCACCTAACGCTCGCGGCGGCCGAGCT TCTCAAATCCATGAACCCCAAGTCCTCAAACTCATTCACCACACAAATGGAGTTATTGTCCTCCATCGCGATGGCGTCCC TCACCCGCTTCTCATCCACGGCCAACGGAGCTCCCACGTCGGACCAACACCACACCATCCTCTTCTGTCTGAAATCCAAA AGACTAATGTAACAGTTGTCCTTCCTAGGAAACATTGTAGCAACTAACAAACAGTTGCTACCTTCCATCCATTGAAGCCT ATCAGCATCACCAAGAGACCAACCTACAGGCTCATAGAAAAAATCAATTTGCTTCCCTGTAACCTGGTCCCAAACACCAA CTCCATATTCATTGCTCCTCCCTTTACAGCTAGAAAATATCTTGTAATCAGAACTGAAACTCAAAGCACCAGCAGTGTAA CTCTTCACCTGATTCTCATGACTAACCTGAAACTTGTACCTTAGCTCCCCTGTATGTGAGGTAAACAGACCCATCCCACC ATCACCACGACCAAGCCTTTCGCTGACTCCGATGACTATATTATCCGGGTCAACCCAACCAACATCATTAACTCTCTGGT AATCAAGATTAAGAGGAGGGTGTTCATCTAACATCCAATTATAAACATGAACCATGGAACCATGTGCTACACAACAACCA CCATCAGGCCCAGCTCGAATGGCGGTTCCATCGCCAGGTGCTTGTCCCTGCACTGACCGAGACAACCTCAACCTGTTGCC GTCGAATTGGCCCCACTTCGCAGTACGAACGTGGTCGAGAACGCCGTAGTACAAGGCCTCCCTGTAGAGAAGCTTCTCCG GGAGGTTCGGCGGGATGTAAAGCTCGCCGGTTCGGAGCAGATCCAGGAGAACAGCGAAGCAATCCGGGTTGCGATCGATG AATTTCACGCTCCCGTTATCCGGCAAGAGATCCCAATTCTCGTCCAACATTGCGCCCAACATGGAATTGCGCCCTGCATT GGCGAGCGTTGTTGCTGTTGTTTCCAAAACTCTGCCTCCCACGTTGAATTTCACCCTGTCGTTTTGAACCCCCATGATGT GTTTCCTCCAAAATTGGAAACTTTTTGGAAAACCCAGATGGGGATTGGGTTCAATTCAATCCGTTGAATTGGACAATCAC GGGAATTTCAATTTCAACTTTCAGGTTTCTTACTATAAACAGGGGAAAAACAGAGGAGAAAACAGGGGATTGTGAGAAGG TAAAGAGGAACGGTGTTTAGGTGAAGCCGTGAAGGGAAGTGAATGATTATGAATGAAGGATTGAAATTGAAGAGAAGGGA AATGGGTATGTGAGAAGATCAGAGGATAGGGGTGGTTAAGCAAAGCATGAATGATGATGATGATGATTATGGGGATAAGG GAAAACCAGAAATGGATGAGCATTGAAGGGAGAAGAGAAGATAGATGATGGCTTTTATAAAAGAGGGTTTTGAAAATTGG TGAAAGAGGAATCAAATTGGGTTGGAGCGGTTGGAATTCAAAACGGAAATTGACTCACTTTGATTTGATCTCTCTCCCTC TAAATAAATGATAAATCACTCTGTTTTTCTTCTCTCTCTCTGTTTCCTTTTCTTTAGGGAAAATTTTGGATTTATTTGGA TTTTTCCAATTTCCACGTCTGTTTTGTTTGGCTATTTGATTTGATCTTCCATTGTGTGTGGGTGTAGTGGGTCCTATTAA ATATCTCATCGAACGGCTATTGTGAGATGATGTTGGTGGGAAATAGGGTGAGCATGGATGCAGGGGATAATGACACTCTT GCTTTGCTGACTATGGTAGCTGGCTTCTCTGAGTTCTTATCACGAAGTCCAGTTTTCCTGCGCGGTTTTGGGCATAAAGA AAAACGCGTCTATGGACTTTTAAAATTGATTAGTATATTTTAGAATTCATAATGTTTAGTTTGAGGCCTGAGGAGAAAGA AATTAAAACTTGTCACATTGAGTTTAACGTTGATGGGAGAAGTTGAATTTTGTCATGCAAGTTAAATGTGAGTTCATATC GACTTCACGTAGGAAATTCAAACTCACCTTA
CDS sequence (LotjaGi4g1v0287300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTGCACGCTCGCAGATTCATTGCTACTATTCAAGGGCTCTCAGCAGAAGCCAGCTCTGAGGAGGAGCATTGCTGC CCAGTGTTCACCCAGCATATTTAATATAAAGGTTGATGGGCTTATCCATAAAGGGTTCAGGCATCAAAGACATTTAATTC CTAGGAATAAAGTTGCTGTCATACGAGCTGTGGCAATTCCGGTAGAACCAGCTCCAGCTGAAAGTGCGGAGTACAGAAAA CAACTAGCCGAAAGCTATGGTTTTAGGAAAATTGGAGAGGATCTTCCAGACAATGTCACTTTAAAGGATGTCATCAGTTC CCTTCCTAAGAAGGTCTTTGAGATTGATGATGTTAAGGCATGGAAAACTGTTTTGATATCTGCCACTTCCTATGCTTTGG GGCTTTTTATGATTTCCAAAGCACCCTGGTATCTACTTCCTCTGGCTTGGGCATGGACGGGAACTGCAGTAACTGGGTTC TTTGTCATTGGACATGATTGCGCTCACAAATCATTTTCAACGAACAAATTGGTAGAAGACATTGTTGGAACTCTGGCCTT TTTGCCACTTATTTATCCATACGAGCCGTGGCGGTTTAAGCATGACAAGCACCATGCAAAAACAAATATGTTGAATGAAG ATACTGCTTGGAACCCTGTTTCGAAGGATGAGTTTGACTCAGATCCACTTTTGAGGAAAGCAATAATATATGGATATGGT CCAATTAGATGTTGGATGTCTGTAGCTCACTGGTTGCTGTTGCACTTTGATTTGAAGAAGTTCAGACCAAATGAAGTAAA GAGGGTGAAGATAAGTTTAGCTTGCGTTTTTGCTTTTATAGGAATTGGATGGCCATTAATTATTTACAAGACTGGAATCA TGGGATGGATAAAATTCTGGTTGATGCCATGGTTGGGCTACCACTTCTGGATGAGTACTTTCACCATGGTACATCATACT GCACCACACATACCATTCAAAGACTCAGAAAAGTGGAATGCTGCTCAAGCACAGCTAAATGGAACTGTTCATTGTGATTA CCCTCAATGGATTGAGATTCTATGCCATGATATCAATGTCCATATTCCACATCACATATCCCCAAGAATACCAAGCTATA ATTTACGAGCAGCCCATAAGTCTCTCCAAGAAAATTGGGGAAAGTATCTGAATGAGGCTAGTTGGAATTGGCGATTGATG AAGACAATCATGACGGTGTGCCATGTGTATGATAAGGAGCAAAATTATGTTGCCTTTGATGAACTTGCCCCTGAAGATTC TCAACCAATTAAATTTTTGAAGAATGTCATGCCTGATTATGCTTAA
Protein sequence (LotjaGi4g1v0287300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MACTLADSLLLFKGSQQKPALRRSIAAQCSPSIFNIKVDGLIHKGFRHQRHLIPRNKVAVIRAVAIPVEPAPAESAEYRK QLAESYGFRKIGEDLPDNVTLKDVISSLPKKVFEIDDVKAWKTVLISATSYALGLFMISKAPWYLLPLAWAWTGTAVTGF FVIGHDCAHKSFSTNKLVEDIVGTLAFLPLIYPYEPWRFKHDKHHAKTNMLNEDTAWNPVSKDEFDSDPLLRKAIIYGYG PIRCWMSVAHWLLLHFDLKKFRPNEVKRVKISLACVFAFIGIGWPLIIYKTGIMGWIKFWLMPWLGYHFWMSTFTMVHHT APHIPFKDSEKWNAAQAQLNGTVHCDYPQWIEILCHDINVHIPHHISPRIPSYNLRAAHKSLQENWGKYLNEASWNWRLM KTIMTVCHVYDKEQNYVAFDELAPEDSQPIKFLKNVMPDYA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 119 | 119 | - | – | |
| PANTHER | 29 | 439 | 411 | 2.4E-228 | – | |
| PANTHER | 29 | 439 | 411 | 2.4E-228 | – | |
| CDD | 119 | 375 | 257 | 2.3911E-78 | – | |
| Phobius | 120 | 138 | 19 | - | – | |
| Phobius | 139 | 143 | 5 | - | – | |
| TMHMM | 142 | 164 | 23 | - | – | |
| Pfam | 143 | 389 | 247 | 1.2E-31 | ||
| Phobius | 144 | 165 | 22 | - | – | |
| Phobius | 166 | 176 | 11 | - | – | |
| Phobius | 177 | 194 | 18 | - | – | |
| TMHMM | 177 | 194 | 18 | - | – | |
| Phobius | 195 | 233 | 39 | - | – | |
| Phobius | 234 | 256 | 23 | - | – | |
| TMHMM | 235 | 254 | 20 | - | – | |
| Phobius | 257 | 267 | 11 | - | – | |
| Phobius | 268 | 287 | 20 | - | – | |
| TMHMM | 275 | 297 | 23 | - | – | |
| Phobius | 288 | 292 | 5 | - | – | |
| Phobius | 293 | 310 | 18 | - | – | |
| Phobius | 311 | 441 | 131 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Lipid metabolic process | The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids. |
Expression pattern of LotjaGi4g1v0287300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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