Domain Predictions — View

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PTHR32100

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 18

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0123589.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: omega-3 fatty acid desaturase, endoplasmic reticulum-like [Cicer arietinum] gi\|502129346\|ref\|XP_004500272.1\|	Domains CYTOPLASMIC_DOMAIN IPR005804 IPR021863 NON_CYTOPLASMIC_DOMAIN PF00487 PF11960 PTHR32100 PTHR32100:SF20 TMhelix TRANSMEMBRANE	10
Lj1g3v2337910.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Chloroplast omega-3 fatty acid desaturase [Vigna unguiculata] gi\|164521896\|gb\|ABY60737.1\|	Domains CYTOPLASMIC_DOMAIN IPR005804 IPR021863 NON_CYTOPLASMIC_DOMAIN PF00487 PF11960 PTHR32100 PTHR32100:SF17 TMhelix TRANSMEMBRANE cd03507	11
Lj1g3v4317650.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Oleate desaturase [Caragana korshinskii] gi\|145280641\|gb\|ABP49577.1\|	Domains CYTOPLASMIC_DOMAIN IPR005804 IPR021863 NON_CYTOPLASMIC_DOMAIN PF00487 PF11960 PTHR32100 PTHR32100:SF16 TMhelix TRANSMEMBRANE cd03507	11
Lj2g3v2277520.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Microsomal omega-3 fatty acid desaturase [Glycine max] gi\|34787276\|dbj\|BAC87757.1\|	Domains CYTOPLASMIC_DOMAIN IPR005804 IPR021863 NON_CYTOPLASMIC_DOMAIN PF00487 PF11960 PTHR32100 PTHR32100:SF20 SignalP-noTM_EUK TMhelix TRANSMEMBRANE cd03507	12
Lj4g3v1983380.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Chloroplast omega-6 fatty acid desaturase [Medicago truncatula] gi\|357480091\|ref\|XP_003610331.1\|	Domains CYTOPLASMIC_DOMAIN IPR005804 NON_CYTOPLASMIC_DOMAIN PF00487 PTHR32100 PTHR32100:SF10 TMhelix TRANSMEMBRANE cd03507	9
Lj5g3v2237610.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Oleate desaturase [Caragana korshinskii] gi\|168014138\|gb\|ACA14460.1\|	Domains CYTOPLASMIC_DOMAIN IPR005804 NON_CYTOPLASMIC_DOMAIN PF00487 PTHR32100 PTHR32100:SF16 TMhelix TRANSMEMBRANE cd03507	9
Lj5g3v2237610.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Oleate desaturase [Caragana korshinskii] gi\|168014138\|gb\|ACA14460.1\|	Domains CYTOPLASMIC_DOMAIN IPR005804 NON_CYTOPLASMIC_DOMAIN PF00487 PTHR32100 PTHR32100:SF16 TMhelix TRANSMEMBRANE cd03507 mobidb-lite	10
Lj6g3v1078310.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Plastidial delta-12 oleate desaturase [Olea europaea] gi\|58013371\|gb\|AAW63039.1\|	Domains IPR005804 PF00487 PTHR32100 PTHR32100:SF10 TMhelix	5
LotjaGi1g1v0119600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Omega-3 fatty acid desaturase; TAIR: AT5G05580.1 fatty acid desaturase 8; Swiss-Prot: sp\|P48625\|FAD3E_SOYBN Omega-3 fatty acid desaturase, endoplasmic reticulum; TrEMBL-Plants: tr\|A0A151RE40\|A0A151RE40_CAJCA Omega-3 fatty acid desaturase, endoplasmic reticulum; Found in the gene: LotjaGi1g1v0119600	Domains CYTOPLASMIC_DOMAIN IPR005804 IPR021863 NON_CYTOPLASMIC_DOMAIN PF00487 PF11960 PTHR32100 PTHR32100:SF47 SignalP-noTM TMhelix TRANSMEMBRANE cd03507	12
LotjaGi1g1v0726200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Fatty acid desaturase; TAIR: AT3G12120.1 fatty acid desaturase 2; Swiss-Prot: sp\|P48631\|FD6E2_SOYBN Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2; TrEMBL-Plants: tr\|I3S3W4\|I3S3W4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0726200	Domains CYTOPLASMIC_DOMAIN IPR005804 IPR021863 NON_CYTOPLASMIC_DOMAIN PF00487 PF11960 PTHR32100 PTHR32100:SF13 TMhelix TRANSMEMBRANE cd03507	11
LotjaGi3g1v0193900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Omega-3 fatty acid desaturase; TAIR: AT5G05580.1 fatty acid desaturase 8; Swiss-Prot: sp\|P48620\|FAD3C_SESIN Omega-3 fatty acid desaturase, chloroplastic; TrEMBL-Plants: tr\|B6CI32\|B6CI32_VIGUN Chloroplast omega-3 fatty acid desaturase; Found in the gene: LotjaGi3g1v0193900	Domains CYTOPLASMIC_DOMAIN IPR005804 IPR021863 NON_CYTOPLASMIC_DOMAIN PF00487 PF11960 PTHR32100 PTHR32100:SF51 TMhelix TRANSMEMBRANE cd03507	11
LotjaGi4g1v0287300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Fatty-acid desaturase; TAIR: AT4G30950.1 fatty acid desaturase 6; Swiss-Prot: sp\|P48628\|FAD6C_SOYBN Omega-6 fatty acid desaturase, chloroplastic; TrEMBL-Plants: tr\|I1JGN9\|I1JGN9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0287300	Domains CYTOPLASMIC_DOMAIN IPR005804 NON_CYTOPLASMIC_DOMAIN PF00487 PTHR32100 PTHR32100:SF10 TMhelix TRANSMEMBRANE cd03507	9
LotjaGi4g1v0287300.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Fatty-acid desaturase; TAIR: AT4G30950.1 fatty acid desaturase 6; Swiss-Prot: sp\|P48628\|FAD6C_SOYBN Omega-6 fatty acid desaturase, chloroplastic; TrEMBL-Plants: tr\|G7JGR1\|G7JGR1_MEDTR Fatty-acid desaturase; Found in the gene: LotjaGi4g1v0287300	Domains CYTOPLASMIC_DOMAIN IPR005804 NON_CYTOPLASMIC_DOMAIN PF00487 PTHR32100 PTHR32100:SF10 TMhelix TRANSMEMBRANE cd03507	9
LotjaGi4g1v0287300.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Fatty-acid desaturase; TAIR: AT4G30950.1 fatty acid desaturase 6; Swiss-Prot: sp\|P48627\|FAD6C_BRANA Omega-6 fatty acid desaturase, chloroplastic; TrEMBL-Plants: tr\|E6Y9A8\|E6Y9A8_ARAHY Chloroplast omega-6 fatty acid desaturase; Found in the gene: LotjaGi4g1v0287300	Domains IPR005804 PF00487 PTHR32100 PTHR32100:SF10	4
LotjaGi5g1v0343700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Fatty acid desaturase; TAIR: AT3G12120.1 fatty acid desaturase 2; Swiss-Prot: sp\|P48630\|FD6E1_SOYBN Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 1; TrEMBL-Plants: tr\|B1A9T6\|B1A9T6_9FABA Oleate desaturase; Found in the gene: LotjaGi5g1v0343700	Domains CYTOPLASMIC_DOMAIN IPR005804 NON_CYTOPLASMIC_DOMAIN PF00487 PTHR32100 PTHR32100:SF40 TMhelix TRANSMEMBRANE cd03507 mobidb-lite	10
LotjaGi6g1v0123500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Omega-3 fatty acid desaturase; TAIR: AT5G05580.1 fatty acid desaturase 8; Swiss-Prot: sp\|P32291\|FAD3E_VIGRR Omega-3 fatty acid desaturase, endoplasmic reticulum; TrEMBL-Plants: tr\|I3TAN8\|I3TAN8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0123500	Domains CYTOPLASMIC_DOMAIN IPR005804 IPR021863 NON_CYTOPLASMIC_DOMAIN PF00487 PF11960 PTHR32100 PTHR32100:SF47 TMhelix TRANSMEMBRANE cd03507	11
LotjaGi6g1v0204100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Fatty-acid desaturase; TAIR: AT4G30950.1 fatty acid desaturase 6; Swiss-Prot: sp\|P48627\|FAD6C_BRANA Omega-6 fatty acid desaturase, chloroplastic; TrEMBL-Plants: tr\|I1JGN9\|I1JGN9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0204100	Domains IPR005804 PF00487 PTHR32100 PTHR32100:SF10 TMhelix	5
LotjaGi6g1v0204100.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Fatty-acid desaturase; TAIR: AT4G30950.1 fatty acid desaturase 6; Swiss-Prot: sp\|P48627\|FAD6C_BRANA Omega-6 fatty acid desaturase, chloroplastic; TrEMBL-Plants: tr\|I1JGN9\|I1JGN9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0204100	Domains IPR005804 PF00487 PTHR32100 PTHR32100:SF10	4

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
PTHR32100:SF10	PANTHER	1	5.56