Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR005804
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 38 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.458s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0013289.1
n.a. PREDICTED: fatty acid desaturase 3-like [Glycine max] gi|356526912|ref|XP_003532059.1| chr0 5019519 5021462 -
2 domain predictions
1 GO term
Lj0g3v0112719.1
n.a. Delta-6-desaturase [Medicago truncatula] gi|357437417|ref|XP_003588984.1| chr0 49182724 49184756 +
2 domain predictions
1 GO term
Lj0g3v0123589.1
n.a. PREDICTED: omega-3 fatty acid desaturase, endoplasmic reticulum-like [Cicer arietinum] gi|502129346|ref|XP_004500272.1| chr0 55439744 55441358 -
2 domain predictions
1 GO term
Lj0g3v0357469.1
n.a. PREDICTED: fatty acid desaturase 3-like [Glycine max] gi|356526912|ref|XP_003532059.1| chr0 188213305 188215304 +
2 domain predictions
1 GO term
Lj1g3v2337910.1
n.a. chloroplast omega-3 fatty acid desaturase [Vigna unguiculata] gi|164521896|gb|ABY60737.1| chr1 27639045 27642865 -
2 domain predictions
1 GO term
Lj1g3v4317650.1
n.a. oleate desaturase [Caragana korshinskii] gi|145280641|gb|ABP49577.1| chr1 50825225 50830211 +
2 domain predictions
1 GO term
Lj2g3v2277520.1
n.a. microsomal omega-3 fatty acid desaturase [Glycine max] gi|34787276|dbj|BAC87757.1| chr2 33277483 33282202 -
2 domain predictions
1 GO term
Lj3g3v2187030.1
n.a. Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase [Medicago truncatula] gi|357468181|ref|XP_003604375.1| chr3 27136554 27139150 +
2 domain predictions
1 GO term
Lj3g3v2986090.1
n.a. Fatty acid/sphingolipid desaturase [Theobroma cacao] gi|508703935|gb|EOX95831.1| chr3 36960556 36962204 +
2 domain predictions
1 GO term
Lj4g3v1983380.1
n.a. Chloroplast omega-6 fatty acid desaturase [Medicago truncatula] gi|357480091|ref|XP_003610331.1| chr4 27552491 27558554 +
2 domain predictions
1 GO term
Lj5g3v0405030.1
n.a. Delta-6-desaturase [Medicago truncatula] gi|357437417|ref|XP_003588984.1| chr5 3937753 3939356 -
2 domain predictions
1 GO term
Lj5g3v2237610.1
n.a. oleate desaturase [Caragana korshinskii] gi|168014138|gb|ACA14460.1| chr5 32095591 32097552 +
2 domain predictions
1 GO term
Lj5g3v2237610.2
n.a. oleate desaturase [Caragana korshinskii] gi|168014138|gb|ACA14460.1| chr5 32095706 32097552 +
2 domain predictions
1 GO term
Lj6g3v1078310.1
n.a. plastidial delta-12 oleate desaturase [Olea europaea] gi|58013371|gb|AAW63039.1| chr6 12763961 12766405 -
2 domain predictions
1 GO term
Lj6g3v2043190.1
n.a. PREDICTED: sphingolipid delta(4)-desaturase DES1-like [Cicer arietinum] gi|502077808|ref|XP_004485750.1| chr6 24118737 24120952 -
2 domain predictions
1 GO term
LotjaGi1g1v0119600.1
n.a. Omega-3 fatty acid desaturase; TAIR: AT5G05580.1 fatty acid desaturase 8; Swiss-Prot: sp|P48625|FAD3E_SOYBN Omega-3 fatty acid desaturase, endoplasmic reticulum; TrEMBL-Plants: tr|A0A151RE40|A0A151RE40_CAJCA Omega-3 fatty acid desaturase, endoplasmic reticulum; Found in the gene: LotjaGi1g1v0119600 LjG1.1_chr1 18862026 18867276 +
2 domain predictions
1 GO term
LotjaGi1g1v0726200.1
n.a. Fatty acid desaturase; TAIR: AT3G12120.1 fatty acid desaturase 2; Swiss-Prot: sp|P48631|FD6E2_SOYBN Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2; TrEMBL-Plants: tr|I3S3W4|I3S3W4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0726200 LjG1.1_chr1 129723834 129729459 +
2 domain predictions
1 GO term
LotjaGi2g1v0305100.1
n.a. Desaturase; TAIR: AT2G46210.1 Fatty acid/sphingolipid desaturase; Swiss-Prot: sp|Q3EBF7|SLD2_ARATH Delta(8)-fatty-acid desaturase 2; TrEMBL-Plants: tr|A0A061DUT1|A0A061DUT1_THECC Fatty acid/sphingolipid desaturase; Found in the gene: LotjaGi2g1v0305100 LjG1.1_chr2 77846146 77847937 -
2 domain predictions
1 GO term
LotjaGi3g1v0193900.1
n.a. Omega-3 fatty acid desaturase; TAIR: AT5G05580.1 fatty acid desaturase 8; Swiss-Prot: sp|P48620|FAD3C_SESIN Omega-3 fatty acid desaturase, chloroplastic; TrEMBL-Plants: tr|B6CI32|B6CI32_VIGUN Chloroplast omega-3 fatty acid desaturase; Found in the gene: LotjaGi3g1v0193900 LjG1.1_chr3 28081223 28085392 -
2 domain predictions
1 GO term
LotjaGi3g1v0355800.1
n.a. Delta 9 desaturase, putative; TAIR: AT3G15850.1 fatty acid desaturase 5; Swiss-Prot: sp|Q949X0|ADS3_ARATH Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic; TrEMBL-Plants: tr|G7JGX9|G7JGX9_MEDTR Fatty-acid desaturase; Found in the gene: LotjaGi3g1v0355800 LjG1.1_chr3 73751071 73753588 +
2 domain predictions
1 GO term
LotjaGi4g1v0176100.1
n.a. Desaturase; TAIR: AT2G46210.1 Fatty acid/sphingolipid desaturase; Swiss-Prot: sp|Q3EBF7|SLD2_ARATH Delta(8)-fatty-acid desaturase 2; TrEMBL-Plants: tr|A0A1J7I1T3|A0A1J7I1T3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0176100 LjG1.1_chr4 35685456 35687963 -
2 domain predictions
1 GO term
LotjaGi4g1v0176100.2
n.a. Desaturase; TAIR: AT2G46210.1 Fatty acid/sphingolipid desaturase; Swiss-Prot: sp|Q3EBF7|SLD2_ARATH Delta(8)-fatty-acid desaturase 2; TrEMBL-Plants: tr|A0A1J7I1T3|A0A1J7I1T3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0176100 LjG1.1_chr4 35686027 35687594 -
2 domain predictions
1 GO term
LotjaGi4g1v0176100.3
n.a. Desaturase; TAIR: AT2G46210.1 Fatty acid/sphingolipid desaturase; Swiss-Prot: sp|Q3EBF7|SLD2_ARATH Delta(8)-fatty-acid desaturase 2; TrEMBL-Plants: tr|A0A1J7I1T3|A0A1J7I1T3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0176100 LjG1.1_chr4 35686027 35687640 -
2 domain predictions
1 GO term
LotjaGi4g1v0184800.1
n.a. Desaturase; TAIR: AT2G46210.1 Fatty acid/sphingolipid desaturase; Swiss-Prot: sp|Q3EBF7|SLD2_ARATH Delta(8)-fatty-acid desaturase 2; TrEMBL-Plants: tr|A0A1J7I1T3|A0A1J7I1T3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0184800 LjG1.1_chr4 40166035 40168159 +
2 domain predictions
1 GO term
LotjaGi4g1v0184800.2
n.a. Desaturase; TAIR: AT2G46210.1 Fatty acid/sphingolipid desaturase; Swiss-Prot: sp|Q3EBF7|SLD2_ARATH Delta(8)-fatty-acid desaturase 2; TrEMBL-Plants: tr|A0A1J7I1T3|A0A1J7I1T3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0184800 LjG1.1_chr4 40166039 40172815 +
2 domain predictions
1 GO term
LotjaGi4g1v0184800.3
n.a. Desaturase; TAIR: AT2G46210.1 Fatty acid/sphingolipid desaturase; Swiss-Prot: sp|Q3EBF7|SLD2_ARATH Delta(8)-fatty-acid desaturase 2; TrEMBL-Plants: tr|A0A1J7I1T3|A0A1J7I1T3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0184800 LjG1.1_chr4 40166285 40167896 +
2 domain predictions
1 GO term
LotjaGi4g1v0184800.4
n.a. Desaturase; TAIR: AT2G46210.1 Fatty acid/sphingolipid desaturase; Swiss-Prot: sp|Q3EBF7|SLD2_ARATH Delta(8)-fatty-acid desaturase 2; TrEMBL-Plants: tr|A0A1J7I1T3|A0A1J7I1T3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0184800 LjG1.1_chr4 40166430 40167896 +
2 domain predictions
1 GO term
LotjaGi4g1v0287300.1
n.a. Fatty-acid desaturase; TAIR: AT4G30950.1 fatty acid desaturase 6; Swiss-Prot: sp|P48628|FAD6C_SOYBN Omega-6 fatty acid desaturase, chloroplastic; TrEMBL-Plants: tr|I1JGN9|I1JGN9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0287300 LjG1.1_chr4 65965565 65975195 +
2 domain predictions
1 GO term
LotjaGi4g1v0287300.2
n.a. Fatty-acid desaturase; TAIR: AT4G30950.1 fatty acid desaturase 6; Swiss-Prot: sp|P48628|FAD6C_SOYBN Omega-6 fatty acid desaturase, chloroplastic; TrEMBL-Plants: tr|G7JGR1|G7JGR1_MEDTR Fatty-acid desaturase; Found in the gene: LotjaGi4g1v0287300 LjG1.1_chr4 65966570 65971284 +
2 domain predictions
1 GO term
LotjaGi4g1v0287300.3
n.a. Fatty-acid desaturase; TAIR: AT4G30950.1 fatty acid desaturase 6; Swiss-Prot: sp|P48627|FAD6C_BRANA Omega-6 fatty acid desaturase, chloroplastic; TrEMBL-Plants: tr|E6Y9A8|E6Y9A8_ARAHY Chloroplast omega-6 fatty acid desaturase; Found in the gene: LotjaGi4g1v0287300 LjG1.1_chr4 65969602 65971284 +
2 domain predictions
1 GO term
LotjaGi5g1v0043300.1
n.a. Desaturase; TAIR: AT3G61580.1 Fatty acid/sphingolipid desaturase; Swiss-Prot: sp|O04353|DES6_BOROF Acyl-lipid (9-3)-desaturase; TrEMBL-Plants: tr|G7I9X4|G7I9X4_MEDTR Fatty acid/sphingolipid desaturase; Found in the gene: LotjaGi5g1v0043300 LjG1.1_chr5 7285712 7289319 +
2 domain predictions
1 GO term
LotjaGi5g1v0043300.2
n.a. Desaturase; TAIR: AT3G61580.1 Fatty acid/sphingolipid desaturase; Swiss-Prot: sp|O04353|DES6_BOROF Acyl-lipid (9-3)-desaturase; TrEMBL-Plants: tr|G7I9X4|G7I9X4_MEDTR Fatty acid/sphingolipid desaturase; Found in the gene: LotjaGi5g1v0043300 LjG1.1_chr5 7285881 7287239 +
2 domain predictions
1 GO term
LotjaGi5g1v0343700.1
n.a. Fatty acid desaturase; TAIR: AT3G12120.1 fatty acid desaturase 2; Swiss-Prot: sp|P48630|FD6E1_SOYBN Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 1; TrEMBL-Plants: tr|B1A9T6|B1A9T6_9FABA Oleate desaturase; Found in the gene: LotjaGi5g1v0343700 LjG1.1_chr5 66085281 66087392 +
2 domain predictions
1 GO term
LotjaGi6g1v0123500.1
n.a. Omega-3 fatty acid desaturase; TAIR: AT5G05580.1 fatty acid desaturase 8; Swiss-Prot: sp|P32291|FAD3E_VIGRR Omega-3 fatty acid desaturase, endoplasmic reticulum; TrEMBL-Plants: tr|I3TAN8|I3TAN8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0123500 LjG1.1_chr6 31539874 31545069 +
2 domain predictions
1 GO term
LotjaGi6g1v0204100.1
n.a. Fatty-acid desaturase; TAIR: AT4G30950.1 fatty acid desaturase 6; Swiss-Prot: sp|P48627|FAD6C_BRANA Omega-6 fatty acid desaturase, chloroplastic; TrEMBL-Plants: tr|I1JGN9|I1JGN9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0204100 LjG1.1_chr6 50143216 50145846 -
2 domain predictions
1 GO term
LotjaGi6g1v0204100.2
n.a. Fatty-acid desaturase; TAIR: AT4G30950.1 fatty acid desaturase 6; Swiss-Prot: sp|P48627|FAD6C_BRANA Omega-6 fatty acid desaturase, chloroplastic; TrEMBL-Plants: tr|I1JGN9|I1JGN9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0204100 LjG1.1_chr6 50143576 50144622 -
2 domain predictions
1 GO term
LotjaGi6g1v0333400.1
n.a. Sphingolipid delta-4 desaturase; TAIR: AT4G04930.1 fatty acid desaturase family protein; Swiss-Prot: sp|Q6H5U3|DES1L_ORYSJ Sphingolipid delta(4)-desaturase DES1-like; TrEMBL-Plants: tr|I3SQJ0|I3SQJ0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0333400 LjG1.1_chr6 64819998 64822291 -
2 domain predictions
1 GO term
LotjaGi6g1v0333400.2
n.a. Sphingolipid delta-4 desaturase; TAIR: AT4G04930.1 fatty acid desaturase family protein; Swiss-Prot: sp|Q6H5U3|DES1L_ORYSJ Sphingolipid delta(4)-desaturase DES1-like; TrEMBL-Plants: tr|I3SQJ0|I3SQJ0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0333400 LjG1.1_chr6 64820434 64822288 -
2 domain predictions
1 GO term