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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0287500 |
| Transcript ID | LotjaGi4g1v0287500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ubiquitin carboxyl-terminal hydrolase; TAIR: AT5G57990.1 ubiquitin-specific protease 23; Swiss-Prot: sp|Q9FPS4|UBP23_ARATH Ubiquitin carboxyl-terminal hydrolase 23; TrEMBL-Plants: tr|K7K9R0|K7K9R0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0287500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:65984680..65992909) extracted from Lotus japonicus Gifu genome v1.2.
ATGAGTTTGCGTTTCAGACAGAAGTCACAAAACCCATTGGGTAGAGGATTTATTAGCCCAGGCCCATACCCGTTAGAATT TGGGGAGAGGGTTTTGTTTTGCCTCTATTTTGTTTTGTAGGGTTTAATAGTAGCTAGCATCTTCTTCATTTTCTCTCTAC AGATTTCAAACCTGCGCTTACGATTCTGAACCTTGTCTTTCTCCTGTTCGAACTGTTTTCTGGATCAATTCGCGTTTCTC ACCGATTCCGAATTGTGTGACGAATGGCGGAGATTCAAACGGAAACTCCGCCGCCGGATCCAGCACAATCTTCTTCTCTT TTTAGCAGAAAAATTGAATTCGTGCCTATCAGAAAACCCTTCAATGGGTTTTCCAATGATTTTCACCTTGAAACGCTTAA TCCTTCAACCTCTGGAGCAGCTCGTAAACCTTCTTCCGCTTCCGCTCTCAAAAAGCATGACTCGGAATACTCAGATTTTG GCTTAGATCCAGAGCTCAGCTTCGGGATGATGACCTTTAGAAGAATAGTGAGTTTCGCATCTCTTTGAAAATTGTTAGTT TTTGATTTTGTATATTTTGTGAAGAAGATTAAAGTATTTGTTCATAATTTTCAGGGAGCTGGGTTGCAAAATCTGGGAAA CACTTGCTTTCTGAATTCAGTACTACAATGTTTGACATACACAGAGCCTCTAGCTGCATACCTGCAAAGTGGCAAGCATA AGACTTCATGTGAGCAACTCTCCACATTTTCATTTTCTGTTAAGATTATGTTGGTGGAGAGCTTTGGCATTTGTGGTTCA CTTTTGCTTTGGTGTGCTTGTCATTGTTAAATGACTTTAGTTGAAGTAGTCAAGTATTCATGGTTTTCCATGTTACTTGG CAATGATTCATGTGCATGTTCATTTTACTATCATTGTAGGCCGCGTTGCTGGATTTTGCGCTCTCTGTGCAATACAGAAT CATGTTAGTCGTGCACTGCAAGCATCTGGGAAGATATTGTCTCCTCAAGCCCTGGTTGGAAATCTACGTTGTATCCTTAT GTTATGTGTTTGATTTATGAATTAGGAAATGGTGTCCTCTCTTGATTTATATTGTTTGAGCATGTATTCCATTTAGCCAA GGAGAATAGTTGGCTTGGAACTTGTAAGTTTGTTTTTATGGTGCATGTATTCCTTTGAAGTTTGAACCTAGGAGTTTCTT AGCATGAAACTTCACATTTTCTCATATCAACATCTTAAGATTGGAAGTTACCATAATCTAATTAGTCTATTCGAGAAACA TGGCAACTAACTTCTTGACTTTTATTTACCAAGCCATGAGGTTTTCCTTCATGCTTCTCATTGTGGTTTACCGATTGCCC TCTTCAACTTCTGAGCAGGAAAAAGAATGAATCACTTGTATGGGGTTTATTATTTTGACTGCTTATGAGCCTAAGAGGCT TAGTAAATTGTCATGATTTATTTATCCTTGTCACTATTTCATGTGTTTCATATGTTAGCCAAGACATAATAATTTTGGGT TGACATTAGAGTGATTGTTTGATGTGTTTGTCTATCAGTACTGTTACCTGCATCCATTTTTGGGTTGAAATGCACTGTCC CCTTTCTTTAGCTTGAATTTTGCACATCCTGACATGAGATCAAACATATAACGTATTGTCATTATTTATTTATCCTTGTC ACTATTTCATGTGCTTCATATGTTAGCCAAAACATAATAATGTTTGGGTTGACATTAGAGTGAATTTTAATGTGTTTGTC CTGTTCCCTGCATACATTTTTGGGTTGAAATGCACTGTCCCCTTTCTTTAGGTTGAATTTTGTACTTCCTGACATGAGAT CAGGCATATCACGTAATTTTAGAAATGCAAGGCAGGAGGATGCACATGAGTATATGGTGAACTTACTTGAGTCCATGCAT AAATGCTGCCTACCTTCTGGAGTACCAAGTGAATCACCTAGTGCTTATGATAAAAGTTTGGTTCATAAGATTTTTGGCGG GCGTCTTCGGAGTCAGGTATTTATTTCTCGATTTGTGGCTTAGTTTTTAAGAGCATTGACATTGCTAATTAAGGTTTGAA AACAGTTCACCCAATGTTGTCTCAAGGTAATGAATTATATTAACAATAGTTACATCACTGGGAGTATTATTACTAGGAAT ATTATTCCCTGGTAAAATTTACAAATTTGTTTGGTATATAGTGAATATTCCCAGGAATATTTTTAAATTATTTAATTCAA AAATTAAAATAACCCAAAAATTGGAAAAAAATGATAGAATGTGGTAGAAGTGGATAGTTATCTTCAAAGTAACTTCATTC CCATGGAAATATAAGATTAGAGCATCTACATCCATCATACTCACTAAAATAGCTACACTTCATTTTTTACAATTCCCCAT AATGTCACATCATCTATACCACTCTACTAACTTTTTACTCCAACCCAACAACTCTTAAAAGTTTCTATAATGGATCCCAC TATCAACATCACATTTGTATATTTTATTATTTATCTTCATTTTAATTAATTATATTTGCAACTTATATTAATGGTAAGTG CTTGTAATAAATACAAGCTCACTTTTCAAGTCTAGTGTAGAGTATCTATTCCCACATACTCATCTTTGCCATGTTGGAAT TGAATATGTACTCCAATGGTAACACATACTCATATGAGTATGTATTTAACATTAGATACTACCATTGGAGATGCTCTTAT GATCTTTAATCATGGGAATAGAAACTAGGTGAAATGTGGATAAAGTAAACTCTTTTCCTGGAAATGCATTATACTCAAAA ATATTTTCCCATAACTTGTACCAAACACTGGAACGTTGCACTCCTATACTTTCTTTCCTGAGTTCTGATACCTAGTGGTT GCTTTTTCCAGGTGAAGTGCCAAGAGTGTTCTTCTAGCTCCAACAAGTTTGATCCATTCTTAGATTTAAGTCTTGAAATA TCCAGGGCAGATTCAGTGCAAAAAGCACTTGTCAATTTCACAGCCAAAGAATGGTTGGATGGAGGCGAGAGGGAATACAA TTGTCAACGATGCAAGAAGAAAGTTAGAGCTCTCAAACAATTAACAATACACAAGGCACCTTATGTGCTAACCATTCATC TAAAGCGGTTTCACGCTCATGATCCTGGGCAAAAGATTAAAAAGAAGGTTCAGTTTGGCTGTGCACTGGATTTAAAACCT TTTGTCAGTGGTTCATATGTAAGCAAATTCTTCTTCCTAATGATATAAATCATATAATTTCTATATGTATATCTGTGTTT TTTTGTGCAAGATTATATGCACTCAATATTTGTTTTTTTTTTGAAGGGATTTATTATGTTCAATTGTACAGGCTCAACAA ATATTTTGTTTGACTGCTTTCTATTTGTCTCTGAAATTTTGTTATGTTATACTTCTCACTTTTAAATTTCTTTCGTCCAA CAGGATGAAGATTTGAAGTACTCTTTATATGGGGTTCTGGTTCATTCTGGTTCTAGCACTCATTCTGGCCACTATTTCTG CTATGTTCGCACTTCAAATAATATGTGGTATACCTTGGACGACAACCGGGTACTAAAGAATAACTTTTTCTAATCTAGCT TTATGACTTTTATAGTTATTTGCATTAATTTCATACATTTCAATAAACTAAGAAAATGCAGCCAGTCCTCCCAATATGGG AAACTAAAACAACCAAAGCCTTATGCTCATAGGGTCAGGTATATGGATCAGACATTTTCATGATGAAGGATAAACTAAAA GTAAATATTCCGTGTAGAATAGCATCTCTATTCTTGATGTTATGTTGCATTGATGCTAGTTCCATTTAAAAAAGAACTTC AAGCTTTAGGTGGTGGTTTTTTGCCATTCTGGTTTCAGTACTCGTTTTGGCCCCTATTATGCTTGCATCTTTAATAACAT GTGGCATACCTTGAATGATGATTGGATGCTGATAATATGCTTATATAATTTTTATCCAGCACCATGTTTTATTTCAAAGA TGTGGAGAGCTAAAAAGAAATGTTATTGAGAGAAGAAATTATTACCATGCAGAAAGTTATTGTTGCATCGGTGTTTATTT AATTGAGAAACAAAAACTAAATGCAAGCCTTTAGGTGATCGGTTTGTCTGAACTAGAAACTACATATACATCCTAATTCT TGCCAAATCTGACTTGCTTTCTCTCAGAACTGAATAAATACTGCTGTTTTTCGACTACACTTTGGTTAATTACTTGTTAT GAAATTGGGGGTGCATAGAATTATCATATTGGTGATTGTTCTTTGGATTAGTACTATCATTAAACCAGAGACATAGGTGC TTTGTTGTTACCTTCAGATTGATTTCACTTACCATTTCTTAACTCACCTGGCACTGTTGCAACAGGTTAGTCATGTTAGT GAGCGGGAAGTTTTGAATCAACAAGCTTATATGCTGTTTTATGTTCGTGATCGTAAAAGTATTGTTTCAAGGAAGTCCCT TGACATCGTGAAGAATGGAATTAGAGATTCTTCAACTTCAAATCATGTATCGAAAGAATATCCAAATGGTCTTGTAGAAC CTTCCCTGTCTGCTGAAACTATGAAGAATATGTCAAATGCTGATTTGTTAGAGGTATCTGTTTTGAAGGAGCAAAAATCT AGTGTGATATTAGCAGAAAGCAGGAAGCAAGATAAGAAACCTGCATCTGAACTTTCTTCCTGCGCACAGATAAAGAAGGA CTCACCACAAGGCATGTCATCAGTAGATCAATCCAAAAAAGACAATCATGTCTCTACTGATCTGAAATGTCTGGCTGCAC CTGTTGTTGACAAAACTAATATGTGCAATAAGAATGAAATTTTGAAAGACGACACTAAAGATTCAATAGTGCCAGACTTC ATTAGTCAGTATCCTGAGGTAATTTTTTCCATATACTTCCAGTGCTTAATTAGTACTATTTCATTTTTCTTGATTACTGA TATGTGAATCATCTCTCGACTTAGAAAACTTTTGTCACAAAAGATGCTCAAGATTCAAGTACAAATTTGTCAATAAGCAC CAGCCCTATAACTTCATTAATTCAACCAGAAGTTAACCGTCAGGTTGTTACACTATCCCCTATTTGCCCATTGCTTTGAG CCTTATTATGTTCATGTTTGACCATACTTTTTTATTTCTAGGCTGGAGCTTCTGCAACTGGCTCAATGCCTACAAAAGCT GGTATAGTTGAAAATGTGGTTGCTTCTCAAGCACTGGTTCTTAACAAGCCAGTAAGTAGATCGTTGGATATGGAGAGACT TAAACAAAAGTATGTGAAAAAATCTAAAAAGAAATTTCTGAAGTATCAGGCATCGAGCATGCATCTTCGGCCCATCTTCC TTTACATGACATATACAGGTCAATGGAAGAAGAAAAATCATAAAAGATGTAAATGCCGCAAGTTGAGTATGAAGAATACA TATAAAGAAAAGTTGGTTAAACATGTCCGTGTATCAAGTTGTCTTGAAAGTAAAGCAACCAAGGCTGGTTATAGAAAGTT TAATGATCAATCTCCGATGGAAATTGACACATTCAGAAAGAGAGTTGATGAGAACTGTGCTTTACTTGCAACCCCTCAGT CATCTGGGTGTAGTACAGTTGTAAATCAGTTTGCAGCTACACAAGCTTATAGTCTTCAAGATGGTAAAAGAGATCAAATG CATAATAGTTTAATGAGTATGCTTACTCGAGGATTGGAGGAGACAGTTGGTAAGTTTACTCTTGTTTTTCCCTCTAGATT TTATTTGCACGTTTGTGTTCCATATCCATGTTTTATTCTTACTATTGGCTGACATATTTGTTGATGAGCTGTCTTAATAT TAGTGAGTGAGTATTCCACTAAAGTAGTCCTGAAAATATTAGTATCCTAGTTTTTTGAACATTTTATTTTGGTTTCTCTA AGATCGTCTAATATTGAATTTGGTGTAAATAGCCCTACTGTTGATATTCTCATAATGGCTTGACAATTTAACCTAAGCTT TGTAGCCTAACCCATAAGGTGCCACTGTGGATGCAAACTTTTGTTGCTTGCAAAATACCTAAATTAACTTATCGAAAATG TTTAATACCTATCTATGATTGGGGAGTCAAGAGAGGAGCCTAGGTATTTATTTTCCTGATACTGACATATTGGGGTTGGT ATTTTTATTTTTTTCCTATTCTGAATCCTCGTCATTTTGAATTCTCCTGGCAATGACAAGGAAAAATTGCTCACATATTT TAAACCCCAATCACTTTCAAGATGGGTCAATATCTAAGATGGTAGCAGCCAATAGGGACAGAGGCAACAGTAGCAGCATT AGCATCAGCAGGAGCAATGTTGAACCTGGTGGTGGTGTTGGTACTGGGGTTTTGTAGTTTTGGCTTTATCTAAATTCTAA TTTTGGCTTATAATTAATTATATATGTGGGTTTTCAGAAATCGCTCAGTAATTTTGGAGATATACACACTTAATCAAATG ATATCATTGAATTTGGGAATGGTTCAAGTAAACCAAACAAACAATTTCAGTACTTGTACGAACATTTTAGTTCAGATGGA ACTTTATATTTGGAATGTGAATCTTTCATTTGCATACTAAATGCTATTATTTTCCCTTGATTCATATGGAACTGCTTTAA TTAATTTAGTTCAGTTTGCTCTCTTATGGTTAAGTACTCGAATGTACTTTGCCAATATTGACACCTTCAGGCTCTATATA TAATACGTGTCTTCTTTATTGGTTACAGTTGCACGTTGGGATGATGTAGAAATAGCTTCATCTCGGGTCATGGACTCAAG GAATGACAAAATTAAGGACATTGGATATGTTGGGGATGAATGGTAAGTTCAGCCATATGTTTTTTTCTTCACCTTCTATT ATTTATTGTCTACCCTTGCACACTCATTTTTCTGCCATGCTTGGAGTATAGTTTTTCCCCTTCAAGAGAGACAATGTGTT TTTTTTTCCAGACATATTAAATCTTTTCTTCTACATATTGAATTGCTTTTGTTAGATAATCAAAGCTTAAAATGTTCTTT AGGCTTCTTCTGTGTCAAACTATGATGTGATTGTCTGCATTGTTTGTTGCGTTGTACTTGTTAGATTCCTTTATTTGACT AGTCCTTTAGGCAATGATTGCTTAAGTGGCTGCAAATGAATCAAAATATGAACGTTCATGTATAAATTTGAATTTTGCTA CATTCAAATTTACAGGGATGAAGAATTAGATAAGGGGAAGAGGAAGAAGTTAAGGACCTTCAAACACAGCTTTGATGGAC CAAATATTTTCCAAGAAATTGCTACTGAGAAATTCAAGTCGAAAAGGGCCAAGTTAGACCACTCTAGCTCAGCGAACCCT CCATTTAGGATATGATTCCAAAACTTCTATCGCCGCCTGTGAGCTTCTTGTATCAATTATTGATTTGTCAAATGCTGAAA ATATTGTGAAGAGAGCACCTACATTATTCTTTTTCTTCAGTGCAAAATTTTGTGATGATCTCTGGGGCAACCCGTGGGAC ATTTCTCTCCCTAGACAAGTATTAGTATTAGCTACATGTTCTAGAAATGAAATGAAACCCATTGTATTGCTGTTGTAGTA GCAGCTACGTTTCTGTGGCTAAGAAATTTTGTTTATGAATTCTTTTTTGTTAAGTTTATCTGTATCTTGCGTGTGAGGAC TTGAGTTGTATTAGAACATTTGGTTTGAGTGTGATTAGTTTAGAAAATATAATAATTAATGAATTCCTAGATTTTTTAGT TTTAATATGTTTTTGTTCAAGTTTTAATATCTTAATTTTTGTAAGTGTTTATAAGACACTTAGTTATTGTATAACCTGAA CTGTATGCGCTAAATCTACAAAGTCTAGGAGTGGAGGTTTATTCTAATTAATAAATTAGCGAATTAATTGTAACGCTTAA ATTTTAGCTTTTTTAGTTTTGTTTAGTTTATATATATTTATGTCTTTGTAGAATATCCTCTCCATTTGATGGTATGACTA ATTTTGTTTAAGAATCTATAACATTCTCGCCTAATAAATGATTTTTATGGTTTAAATTTTAAGCTACTATCATTACATGA TGTAATTTGTGAGTTAAAAAAAGGTTCCGTACATAATTTAAACTATTTATTATTATACTTTTGCGTTAATCTAACTATCG TTATACTCCAAGAACATTCATTCATGGAGGGTTATTAGTTATTAGTACACTGTTGTCAAGAATTTAAAAC
CDS sequence (LotjaGi4g1v0287500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGAGATTCAAACGGAAACTCCGCCGCCGGATCCAGCACAATCTTCTTCTCTTTTTAGCAGAAAAATTGAATTCGT GCCTATCAGAAAACCCTTCAATGGGTTTTCCAATGATTTTCACCTTGAAACGCTTAATCCTTCAACCTCTGGAGCAGCTC GTAAACCTTCTTCCGCTTCCGCTCTCAAAAAGCATGACTCGGAATACTCAGATTTTGGCTTAGATCCAGAGCTCAGCTTC GGGATGATGACCTTTAGAAGAATAGGAGCTGGGTTGCAAAATCTGGGAAACACTTGCTTTCTGAATTCAGTACTACAATG TTTGACATACACAGAGCCTCTAGCTGCATACCTGCAAAGTGGCAAGCATAAGACTTCATGCCGCGTTGCTGGATTTTGCG CTCTCTGTGCAATACAGAATCATGTTAGTCGTGCACTGCAAGCATCTGGGAAGATATTGTCTCCTCAAGCCCTGGTTGGA AATCTACGTTGCATATCACGTAATTTTAGAAATGCAAGGCAGGAGGATGCACATGAGTATATGGTGAACTTACTTGAGTC CATGCATAAATGCTGCCTACCTTCTGGAGTACCAAGTGAATCACCTAGTGCTTATGATAAAAGTTTGGTTCATAAGATTT TTGGCGGGCGTCTTCGGAGTCAGGTGAAGTGCCAAGAGTGTTCTTCTAGCTCCAACAAGTTTGATCCATTCTTAGATTTA AGTCTTGAAATATCCAGGGCAGATTCAGTGCAAAAAGCACTTGTCAATTTCACAGCCAAAGAATGGTTGGATGGAGGCGA GAGGGAATACAATTGTCAACGATGCAAGAAGAAAGTTAGAGCTCTCAAACAATTAACAATACACAAGGCACCTTATGTGC TAACCATTCATCTAAAGCGGTTTCACGCTCATGATCCTGGGCAAAAGATTAAAAAGAAGGTTCAGTTTGGCTGTGCACTG GATTTAAAACCTTTTGTCAGTGGTTCATATGATGAAGATTTGAAGTACTCTTTATATGGGGTTCTGGTTCATTCTGGTTC TAGCACTCATTCTGGCCACTATTTCTGCTATGTTCGCACTTCAAATAATATGTGGTATACCTTGGACGACAACCGGGTTA GTCATGTTAGTGAGCGGGAAGTTTTGAATCAACAAGCTTATATGCTGTTTTATGTTCGTGATCGTAAAAGTATTGTTTCA AGGAAGTCCCTTGACATCGTGAAGAATGGAATTAGAGATTCTTCAACTTCAAATCATGTATCGAAAGAATATCCAAATGG TCTTGTAGAACCTTCCCTGTCTGCTGAAACTATGAAGAATATGTCAAATGCTGATTTGTTAGAGGTATCTGTTTTGAAGG AGCAAAAATCTAGTGTGATATTAGCAGAAAGCAGGAAGCAAGATAAGAAACCTGCATCTGAACTTTCTTCCTGCGCACAG ATAAAGAAGGACTCACCACAAGGCATGTCATCAGTAGATCAATCCAAAAAAGACAATCATGTCTCTACTGATCTGAAATG TCTGGCTGCACCTGTTGTTGACAAAACTAATATGTGCAATAAGAATGAAATTTTGAAAGACGACACTAAAGATTCAATAG TGCCAGACTTCATTAGTCAGTATCCTGAGAAAACTTTTGTCACAAAAGATGCTCAAGATTCAAGTACAAATTTGTCAATA AGCACCAGCCCTATAACTTCATTAATTCAACCAGAAGTTAACCGTCAGGCTGGAGCTTCTGCAACTGGCTCAATGCCTAC AAAAGCTGGTATAGTTGAAAATGTGGTTGCTTCTCAAGCACTGGTTCTTAACAAGCCAGTAAGTAGATCGTTGGATATGG AGAGACTTAAACAAAAGTATGTGAAAAAATCTAAAAAGAAATTTCTGAAGTATCAGGCATCGAGCATGCATCTTCGGCCC ATCTTCCTTTACATGACATATACAGGTCAATGGAAGAAGAAAAATCATAAAAGATGTAAATGCCGCAAGTTGAGTATGAA GAATACATATAAAGAAAAGTTGGTTAAACATGTCCGTGTATCAAGTTGTCTTGAAAGTAAAGCAACCAAGGCTGGTTATA GAAAGTTTAATGATCAATCTCCGATGGAAATTGACACATTCAGAAAGAGAGTTGATGAGAACTGTGCTTTACTTGCAACC CCTCAGTCATCTGGGTGTAGTACAGTTGTAAATCAGTTTGCAGCTACACAAGCTTATAGTCTTCAAGATGGTAAAAGAGA TCAAATGCATAATAGTTTAATGAGTATGCTTACTCGAGGATTGGAGGAGACAGTTGTTGCACGTTGGGATGATGTAGAAA TAGCTTCATCTCGGGTCATGGACTCAAGGAATGACAAAATTAAGGACATTGGATATGTTGGGGATGAATGGGATGAAGAA TTAGATAAGGGGAAGAGGAAGAAGTTAAGGACCTTCAAACACAGCTTTGATGGACCAAATATTTTCCAAGAAATTGCTAC TGAGAAATTCAAGTCGAAAAGGGCCAAGTTAGACCACTCTAGCTCAGCGAACCCTCCATTTAGGATATGA
Protein sequence (LotjaGi4g1v0287500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAEIQTETPPPDPAQSSSLFSRKIEFVPIRKPFNGFSNDFHLETLNPSTSGAARKPSSASALKKHDSEYSDFGLDPELSF GMMTFRRIGAGLQNLGNTCFLNSVLQCLTYTEPLAAYLQSGKHKTSCRVAGFCALCAIQNHVSRALQASGKILSPQALVG NLRCISRNFRNARQEDAHEYMVNLLESMHKCCLPSGVPSESPSAYDKSLVHKIFGGRLRSQVKCQECSSSSNKFDPFLDL SLEISRADSVQKALVNFTAKEWLDGGEREYNCQRCKKKVRALKQLTIHKAPYVLTIHLKRFHAHDPGQKIKKKVQFGCAL DLKPFVSGSYDEDLKYSLYGVLVHSGSSTHSGHYFCYVRTSNNMWYTLDDNRVSHVSEREVLNQQAYMLFYVRDRKSIVS RKSLDIVKNGIRDSSTSNHVSKEYPNGLVEPSLSAETMKNMSNADLLEVSVLKEQKSSVILAESRKQDKKPASELSSCAQ IKKDSPQGMSSVDQSKKDNHVSTDLKCLAAPVVDKTNMCNKNEILKDDTKDSIVPDFISQYPEKTFVTKDAQDSSTNLSI STSPITSLIQPEVNRQAGASATGSMPTKAGIVENVVASQALVLNKPVSRSLDMERLKQKYVKKSKKKFLKYQASSMHLRP IFLYMTYTGQWKKKNHKRCKCRKLSMKNTYKEKLVKHVRVSSCLESKATKAGYRKFNDQSPMEIDTFRKRVDENCALLAT PQSSGCSTVVNQFAATQAYSLQDGKRDQMHNSLMSMLTRGLEETVVARWDDVEIASSRVMDSRNDKIKDIGYVGDEWDEE LDKGKRKKLRTFKHSFDGPNIFQEIATEKFKSKRAKLDHSSSANPPFRI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 17 | 395 | 379 | 6.1E-214 | – | |
| PANTHER | 17 | 395 | 379 | 6.1E-214 | – | |
| Gene3D | 86 | 396 | 311 | 1.0E-92 | – | |
| SUPERFAMILY | 89 | 393 | 305 | 3.92E-89 | ||
| CDD | 89 | 392 | 304 | 1.54691E-158 | – | |
| ProSiteProfiles | 90 | 394 | 305 | 52.077 | ||
| Pfam | 91 | 391 | 301 | 2.5E-54 | ||
| ProSitePatterns | 91 | 106 | 16 | - | ||
| ProSitePatterns | 336 | 354 | 19 | - | ||
| MobiDBLite | 462 | 498 | 37 | - | – | |
| MobiDBLite | 478 | 496 | 19 | - | – | |
| PANTHER | 724 | 826 | 103 | 6.1E-214 | – | |
| PANTHER | 724 | 826 | 103 | 6.1E-214 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Ubiquitin-dependent protein catabolic process | The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein. | ||
| Biological process | Protein deubiquitination | The removal of one or more ubiquitin groups from a protein. | ||
| Molecular function | Thiol-dependent ubiquitinyl hydrolase activity | Catalysis of the thiol-dependent hydrolysis of an ester, thioester, amide, peptide or isopeptide bond formed by the C-terminal glycine of ubiquitin. |
Expression pattern of LotjaGi4g1v0287500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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