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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0288200 |
| Transcript ID | LotjaGi4g1v0288200.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cyclic nucleotide-gated ion channel-like protein; TAIR: AT5G57940.1 cyclic nucleotide gated channel 5; Swiss-Prot: sp|Q8RWS9|CNGC5_ARATH Probable cyclic nucleotide-gated ion channel 5; TrEMBL-Plants: tr|V7C9Q3|V7C9Q3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0288200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:66047663..66055398) extracted from Lotus japonicus Gifu genome v1.2.
TGGTATGACCTTTTTTCAGAGGAAAGTGATATGTTTCTCTGCCATCTGTTCATTTATTTCTAGGTTGGATGACTTTGATC CTAGACTGTCTGCATCTTCTAATGCTGGAGTTATGAAATCTGGATTTGGTATTGATAAGTTAAGCCATGGTGGTCATGGA AGCAGCCCAACCTCTAGGTCTTTTAAAAGAGGAATGAGAAAGGGATCTGAAGGACTGAAGTCACTTGGTCGGTCACTTGG ATTGGGGGTATCTAGGGCGGTGTTCCCGGAAGATCTTAAAGTGTCAGAAAAGAAGATATTTGATCCTCAAGACAAATTCT TGCTCTTATTGAACAAGTTTTTTGTTGTCTCATGCATTTTATCTGTGTCTGTGGATCCACTGTTTTTTTATCTCCCTGTT ATCAATGATCGATTACACTGTCTTGGAATAGACCGAAAGTTGGCAACGATAGTTACCACCTTAAGGACAGTCATTGATGC TTTCTATCTTATACACATGGCTCTCCAATTCCGAACTGCTTATATTGCTCCGTCATCTCGTGTCTTTGGGCGGGGTGAGC TTGTGATAGATTCAGGACAGATAGCCAGGCGATACTTGCAGCGGTATTTCATCATTGATTTCCTGTCTGTGGTGCCGATA CCTCAGGTTGAAAAGATTGTTGTCATCTTGAACCAATCTCCTCTTGTTTATGCTGCATTTAGAATTTTTTGATCTGTTTG AATTAACCGTATGTACAGCTCTGTTATCTTTCATTTTGGAATGCCATAAACTAATAACTTAGCTGCTATCCACTCATTGT TTCTTTTTGTGTTTGAGTCAAGAGTTAATTTGTGGATTCAACTAGTGGATGCTTGTTGGAAGTTTTTTTGTTTGTGTTTT TTATTGGGGGGAGGGGGGATAAAGGAAGATATCCTGTATATAGCAAAGCCGTGAAGAAATAGGCAAACACTGTCATCAAT AAATAAATAAAAACTCTGCAATCCTGTTACAAATCTGATTTCTCTGGTTTGAAATTATTAAAGATGGGGATTCTCCAATA AATCTGTATAATTTTTTTTACGGATGTTTTTAACCTTTCTGATTTGCTACTTCTCTTCTCTTTTTCTTATCAAGTTCTCA TGTTTTTAGATCCATTCTATTTGTTTGTAAGATATGCTATGTTCTATGGGATTCAAGTATAAATGTTAGTTTTTGGTGTG GATATGCCAAACACTTATTTTGGCAGAGGGAGCAGAAGTATTCAACCTGTTAATTCCATGTTGACTTCGAGTATATATAA TATTTCTACTTCTGATATTCTATGGAAATTAGCAACTGCTTACGGCACATTCATTACAAATCCAAAGCACTTCTTTGTGA ATGCTGAGTGGACAGAGTTCAACAGTTATTTGTATTTGTCCAGAGCTGACCTTTTCACAACTGCAACTTTTAGGAGTGTG TTATTATAAGACAACTTTTAATTTAACATTTGTTTGCCCTTTTCCATTCTTATTCTCAGATTGTGGTTTGGAGATTTCTT CAGACGTCAAAAAGTTCAGACGTACTAGCAACAAAGCGGGCCTTGTTTTTCGTTATCTTGCTTCAATATGTTCCTAGATT TCTTCGAATGGTACCATTGACTTCAGAACTTAAGAGAACAGCCGGTGTCTTTGCTGAAACTGCATGGGCAGGTGCAGCAT ATTATTTGCTGTTGTACATGCTTGCTAGTCATGTAAGTTTTTTTTTTGTTCTGATGTTTAATCTTGGTACTTCCATGTTC TATTTGAGGCTTTGAGCTTTATGGTGCATCAACTTTGCCAATAATTTATTGTGTCATTTCCCATCAATTATTATTTGCAG ATAGTTGGTGCTTTTTGGTACTTGTTAGCTATTGAGCGCAATGACTCATGCTGGCAGAAAGCTTGCAGTGAGAATGGGTG CAACCAAAACTTCCTGTATTGTGGCAGTGAGCATGCAGACGGTTATACTGCCTGGCAGAATAGAAGTGAAGCTATTCTTA AGTCAAAGTGCTCTGCAGATGTTGATCCTCCACCTTTTGATTATGGAATTTTTGAACAAGCCCTGTCATCTGGTATAATT TCATCTAAAAAGTTCGTCTCCAAATACTGTTACTGTTTATGGTGGGGGCTCCAAAATTTGAGGTAATTAATTTTGTTTCC TTTGGACATTTTCGTCCTGCATTCTGTATTTCTGTAACAGCAATTAGAAAGATTGGAACATATATGTTCTGTCTGAATTC TGATAAAAGTATGTGCCTTGCAGGATTGATTATATTATTTCGATGTAGTTGCTTGTGAAGATAATGTATTGAATTTAAGC AAATTAGTTAGAAAAAAATGTGGGTCGTAGTTGTATGAGTAATGCACTGGGTAACTTGAACTCTATTAAGGTTGCAGCTC TTGGATGTTCTTTATAGGTTATATTAGTGTTATGTGCCTGTAGTAAAACTTACATAATTGGATCAACATGTTTTACAGCT TGGCAGATTTTTTTATGTGTTCGAAGTGGATTTGAAGTATAGTGGAAAAAAATCTGAATGTGTCTAAACCATTGTGAGAA ATTATACGTTGTGGCTTGTAGTGACTAGCAATAGTTGGGCATTATGATACTCAGGGGCGGACCCACATTAGGCTGAGGGG GTTCAGATGAACCCCCTGAAAAAAGAGAAAACTCCACATACCCCCCTGTAATATTATTTTTTTGAACCCCCTGAAAATTT CAATTTGCACCAAAGACCCTTTCTCTCTCACTAACACACACACTTCTTACTCGGGCCCTCATCCTCTTGCTCTCGCTAGG TCAAGCGCACACACACACCAGCCACCACCACGGCACCACGCCGCTCAGCCACCAGTGCACCATCGGCCACCACCACAGCA CCACCAGTGGATTACCAGTCCAGTGAGTCCACCACGCACCCTTGATTTTTGGTGAGTACCCATTTGCCATTTTCCCCAAA TTTCCCCAAATTTGGAATCCGTTGTTTGATTCTCATAGCACAATTAGTTTCATCAAGCTTTTCTCATGTCATGATCTGTA CCTCTATCTGAATTCCTCCCCCTGCTTTGGACATGGTTCATGGACGTTGTTGTGCTGTTTGCTTTGGCTTTGGGGTAGCG CTACAGTAGCATTTCAGCCCAGCCGTGAATTGGGGTTTGTTTCTTTTCCTCTGGTAGCAAGGATCCTGGCTCGTTAATAC TCTCCTGCTGTAGCTACAAGTGTCTGCTTTTGCTCCTTGCCCGCAACTGCTATGTTCCTTTTCTTTTTCTTTTTTTTGAG TTTGTAGTAGTTGTAGTTGTCTGTAGTAGCTTTTTTCTCTTTTCTCTACTGTTCTGTGTTTGCTTTTCTATGCAAGGGGC CTCTTGAAATTTATTGGCCTTTTGCTTTGATTGTATCTTTCTCTTTTGTTGAAATAAACTCAGCTTTCTAAAAAAAACTA GTGAATTAGAAGTTTCATCAATTTGTTTGATTTTGATTTGGTGTTAAGATCAGAGGGAAATTGCAATTTCTGTTTTGTGC TTAGTGTTCACTTTCAATGGGAAATTGTTAAATAACTTGTGCTTAGTGTTCACTTTCAATTTCATAATTGGGGCTCTAAA AGCTAAAGTTCTCTCTGAAACTTAGGCTCTCCTACTCTTGATATTGGCCTTGTTTCGCTGCTGATGTACCTCAGAGGATT GCTAGAGACATGATTTTGATAGCAGCTAGTTGGATCAATTCTGATTACAAGGTTATTGGGTTTTGTAGTGACATAGGAAG TTAAAGGCTGGTAGGCTCATAAGTAGGCGTTCCTAAGCCTTGCATTTTCCTGTCTGTTCTTGCCTTTGTCTTTGTACTGT GTCCCTTGGACCTCTCTTTTCTTTTTCTTGTTCATGTTCCTTGTAATTACCACAGGTTGAGGTATCCCTAGTACCTCTAT AGTACAAATTTGCTTACCAAAAAAAAAAAACTTTCAATTTCATTTGAAAAATGTGAACCCCCTGACCCCGGGGTCCTGGA TCCGCCACTGATGATACTATATCCTCTTTGATTAGTATTGACCACCCTACATTAAACAACACTTTCTGGTCATTACCAGT TAATTATTTAATTTGATGTTAGTCAGATCAGGCTTCCACTGCCTCTCCAAATCATATGTTCAGATAAGATTATGGGGCTG CTCCTTTGGAGCTGAATACTAACTTGTTGCTTTGTTCTGTTAGGCAAGCCCTAATATTAATTTCTAAAGGTAGGTTACTA ATCTTATCATTAATTGAATATAAGTAATGGGTCTAATTTGTTTAAGGACATCTATTAGTTTACTTTGGGGGTGGAGTTTG ACATCTAGAGTATGTTTTTCTTCCTTTGAATCTTAAAGTTCAATATTTTCAAAGTTTAATATTGCACTGATTGTACCAAA TGTAGTTTTATCTCAGAACTCCTTATTAAGGTGATAAGTAATAAGTCACGTCCTACATTTTTGTGCATGCTTCAATATTT GTTCTAAAGGTTGACCTTATTTTGTCTGATAAATTAGCATGGACCAGATTCATGATATGTATGATATTAACATATAATTG ATAGCATATATGGTTAGCGTTAGCCACCTTCCTGTTACGAAGGTATGCAGTAGAAAGAGTTGCAAGGTTACTAAGGGAAG TCTACTGGCTGCGGAGGCTGAAAAGTGTGAGAAGAGCAGAGGGTGGTGTAAGCTATTTGCAGTTCTGCACACATGGCTAG GGAGGTGGGGGGTCCTTGGTGTTAGTTAGTGTATGAATTAATGAATGAGAGGAGGAGGGTAAGAGAGGTTTTGGAAGAAT TTGAGTAGAAAATGGGGTGGAAGGTTTGCAAGGCACTCAAAGAACCTGTGGCATTGGTAGGTAACCCCCTCCTTTGTTAG TTAGTTACATAGTTAGTAGAATAGTTAGTTCGCTAGTTAGTTAGACTGAGTTAGTGAGTGAGTAGAGGCTATAAATTGGA GGGAGGGGGAATACGTAGGGTATCTGGATTGTAATCAAGGTCATTTGAGGAGAGTGCTGGTCTCTCGAATATCAATAACC ATTGTAGTTCCATTGCTATTGCTGAATAATATCAGTTTATGTTCTTCTTCTATATGAATTCCTATAGGAATTTCTATGTT CTGGTTTTATATGATCTGTAATATTTCTTTTTGATGCTGATATCAGTTTAAGATCACTTCAGAGGAAACTTCTGGTTTTG TGAAATATTCCAGTTTCTATCAAATAGAATGTATTTTTTTTGGAGAGTTTGCTTCTTAATAGTTGGGATTTCAGCTAAAC TATGTCCTATACATGTTTAAGATTTAGTCTGGATTCCGGAAGAAATAACTTATAGAGTATTCATCTGCCAATTCCTTTTT TTTGACTTTGCTGCAGTACACTTGGTCAGGGGCTTCAAACTAGCACCTACCCTTGGGAGGTTATCTTTTCAATAACACTA GCTATATTTGGCCTCATCCTTTTTGCACTTCTAATTGGCAACATGCAGGTACACTTCAAATTATTGAGCTTAAAACATTG TGAAATTAAGTTTGCTGGAAGTCTTGTTATTCTATTTGTCCAGAACATGTTGCAGTATCCATGGGCTTGTATTCGTTTGG GTCAAATGTGCTGGATACTTGAATAGTTGAAATACCCAATATTGATTTTCATGCTTATCAGCAATATATGATGATTTAAA TAGATCGGAGTATTGCAATCATAGTGAGATTAAATGATTTTGAAGTGTTGTAATGGAGCTAGTCTTTTGATAGTAATCTA GTTACTATCTATTTTGTAAGGGTAGCAGTAGGTGGCATATTATCTTATTGGTGAAGATGAATGCTATTATTAATGCTAAA TTTTCTTAGTATCTTTTCAGAACTGATAAACTCCATAATAGTATTCATGTCGAGAACCTGTATAGCATGGACCCACTATT ATGCTGCTTTTGTCATCTACCAATTTTATTTCTTCCAACTTTTCTTTTCATTTTGGCTCATATCATATATTTCAAGATAT TTTAATTTTTGAATCTTATATTATATGATGTTGTATGTTATATAAGTTTTTGTATGCGTTTGTGTGTGCATGTCCAGATT AGGATCCTCTCATGTGCAAATTCTCTCATGTTCCCTCATGTTGAAAGTTTGTGTGTATCTCTCTCTTCATAAACATTTGA AGGGTCCCAACTCCCACCTATACCTATTTAATGCATACATGTGAAGAAAGAAATATACACTAAGTTTCAACATGGGGAAC ATGAGAGGATCCTGATCCGTGTGTGTCCACAAATGTTTGTCATTGATACTGATGTTTCCATATCTTCCCATGATTACAGA CATATCTTCAATCTCTTACCATTAGGCTCGAGGAAATGAGAGTCAAAAGGCGTGACTCGGAACAGTGGATGCATCATCGC TTACTCCCACCAGAGCTTAGAGAGCGTGTGAGACGATATGATCAATATAAGTGGTTGGCAACACGTGGTGTAGATGAAGA CTGTTTAGTTCAGAGTCTACCAAAGGATCTTCGAAGAGATATTAAGCGTCATCTGTGTTTGGCTTTAGTGAGGAGGGTAC GTTGTAAAGCACTTAATGCGTCTTTGTTTTCTTGTTTGATAGGAGGCCTATATGGATTCAGCTCGAAGCTCAATTTTCCA CTTCTCATGTGTATGAGCTATCCATCACATACACAAACATACTCTTAAAAATTAGTGAAACACCAAGGCCCTCTATACTA AAAGGAGATAAGAAGAGGACCTAAAAATTATACATTAAAAGAATTAACATGTGATGACATTATATCAATTCCATATATGT GGTTTACCACTAAATATCACATCAAGTTATGTTTATTTGGTCCTTTTGCACGGTTATAATATTTGGTCCTTTGTCGATTT CACTGATTCTTGACGGTTGCTTTTCTAATTCCTGTGAACACTAATTATAGGTGCCTCTCCATGAGATATTTCAGACTTGA TCTCTCTTGTAGGTTAACTTAGCAAATTGGTGTTTGAGCATCTGAATCTATTAATTCATCAATTGCTTTCAATTGATTTG TAGGTTCCGTTGTTTGAGAGCATGGATGAGAGACTGCTTGATGCCATATGTGAGAGACTTAAACCAAGTTTATTTACAGA GCATACTTACATTGTCCGGGAAGGAGATCCTGTTGATGAGATGCTTTTCATCATACGTGGTCGCCTTGAGAGTGTTACCA CAGATGGTGGGAGGAGCGGATTCTTCAACCGTGGTTTTCTAAAAGAAGCTGATTTCTGTGGGGAGGAGCTTTTAACTTGG GCCCTGGACCCCAGATCTGGTTCTAATCTCCCAACTTCTACTCGAACAGTAAAGGCATTAACAGAGGTTGAGGCTTTTGC CTTAACTGCAGATGAGTTAAAATTTGTTGCGAGTCAGTTTAGGCGCCTTCACAGTAGACAGGTTCAACACACTTTCCGCT TTTACTCGCAACAATGGAGAACTTGGGCTGCGTGCTTTATCCAAGCTGCATGGCGTCGATATTGTAAAAAGAAAATTCTG AAGCTTCGTCAAAAGGAAGAAGCTGATGAGTCAGAAGGAACTCATGACAATGCTAGTGGCATTTCCTCCAGCCTGGGTGC GACCTTGTTAGCCTCAAAGTTTGCGGCACGCACACTTCGTGGTGTGCATCGCAATCGACTTGCTAAAACGGCAAGGGAGT TAGTAAAACTACAAAAACCCCCCGAGCCTGACTTTACAGCAGATGATGCTGACTAA
CDS sequence (LotjaGi4g1v0288200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACCTTTTTTCAGAGGAAAGTGATATGTTTCTCTGCCATCTGTTCATTTATTTCTAGGTTGGATGACTTTGATCCTAG ACTGTCTGCATCTTCTAATGCTGGAGTTATGAAATCTGGATTTGGTATTGATAAGTTAAGCCATGGTGGTCATGGAAGCA GCCCAACCTCTAGGTCTTTTAAAAGAGGAATGAGAAAGGGATCTGAAGGACTGAAGTCACTTGGTCGGTCACTTGGATTG GGGGTATCTAGGGCGGTGTTCCCGGAAGATCTTAAAGTGTCAGAAAAGAAGATATTTGATCCTCAAGACAAATTCTTGCT CTTATTGAACAAGTTTTTTGTTGTCTCATGCATTTTATCTGTGTCTGTGGATCCACTGTTTTTTTATCTCCCTGTTATCA ATGATCGATTACACTGTCTTGGAATAGACCGAAAGTTGGCAACGATAGTTACCACCTTAAGGACAGTCATTGATGCTTTC TATCTTATACACATGGCTCTCCAATTCCGAACTGCTTATATTGCTCCGTCATCTCGTGTCTTTGGGCGGGGTGAGCTTGT GATAGATTCAGGACAGATAGCCAGGCGATACTTGCAGCGGTATTTCATCATTGATTTCCTGTCTGTGGTGCCGATACCTC AGATTGTGGTTTGGAGATTTCTTCAGACGTCAAAAAGTTCAGACGTACTAGCAACAAAGCGGGCCTTGTTTTTCGTTATC TTGCTTCAATATGTTCCTAGATTTCTTCGAATGGTACCATTGACTTCAGAACTTAAGAGAACAGCCGGTGTCTTTGCTGA AACTGCATGGGCAGGTGCAGCATATTATTTGCTGTTGTACATGCTTGCTAGTCATATAGTTGGTGCTTTTTGGTACTTGT TAGCTATTGAGCGCAATGACTCATGCTGGCAGAAAGCTTGCAGTGAGAATGGGTGCAACCAAAACTTCCTGTATTGTGGC AGTGAGCATGCAGACGGTTATACTGCCTGGCAGAATAGAAGTGAAGCTATTCTTAAGTCAAAGTGCTCTGCAGATGTTGA TCCTCCACCTTTTGATTATGGAATTTTTGAACAAGCCCTGTCATCTGGTATAATTTCATCTAAAAAGTTCGTCTCCAAAT ACTGTTACTGTTTATGGTGGGGGCTCCAAAATTTGAGTACACTTGGTCAGGGGCTTCAAACTAGCACCTACCCTTGGGAG GTTATCTTTTCAATAACACTAGCTATATTTGGCCTCATCCTTTTTGCACTTCTAATTGGCAACATGCAGACATATCTTCA ATCTCTTACCATTAGGCTCGAGGAAATGAGAGTCAAAAGGCGTGACTCGGAACAGTGGATGCATCATCGCTTACTCCCAC CAGAGCTTAGAGAGCGTGTGAGACGATATGATCAATATAAGTGGTTGGCAACACGTGGTGTAGATGAAGACTGTTTAGTT CAGAGTCTACCAAAGGATCTTCGAAGAGATATTAAGCGTCATCTGTGTTTGGCTTTAGTGAGGAGGGTTCCGTTGTTTGA GAGCATGGATGAGAGACTGCTTGATGCCATATGTGAGAGACTTAAACCAAGTTTATTTACAGAGCATACTTACATTGTCC GGGAAGGAGATCCTGTTGATGAGATGCTTTTCATCATACGTGGTCGCCTTGAGAGTGTTACCACAGATGGTGGGAGGAGC GGATTCTTCAACCGTGGTTTTCTAAAAGAAGCTGATTTCTGTGGGGAGGAGCTTTTAACTTGGGCCCTGGACCCCAGATC TGGTTCTAATCTCCCAACTTCTACTCGAACAGTAAAGGCATTAACAGAGGTTGAGGCTTTTGCCTTAACTGCAGATGAGT TAAAATTTGTTGCGAGTCAGTTTAGGCGCCTTCACAGTAGACAGGTTCAACACACTTTCCGCTTTTACTCGCAACAATGG AGAACTTGGGCTGCGTGCTTTATCCAAGCTGCATGGCGTCGATATTGTAAAAAGAAAATTCTGAAGCTTCGTCAAAAGGA AGAAGCTGATGAGTCAGAAGGAACTCATGACAATGCTAGTGGCATTTCCTCCAGCCTGGGTGCGACCTTGTTAGCCTCAA AGTTTGCGGCACGCACACTTCGTGGTGTGCATCGCAATCGACTTGCTAAAACGGCAAGGGAGTTAGTAAAACTACAAAAA CCCCCCGAGCCTGACTTTACAGCAGATGATGCTGACTAA
Protein sequence (LotjaGi4g1v0288200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTFFQRKVICFSAICSFISRLDDFDPRLSASSNAGVMKSGFGIDKLSHGGHGSSPTSRSFKRGMRKGSEGLKSLGRSLGL GVSRAVFPEDLKVSEKKIFDPQDKFLLLLNKFFVVSCILSVSVDPLFFYLPVINDRLHCLGIDRKLATIVTTLRTVIDAF YLIHMALQFRTAYIAPSSRVFGRGELVIDSGQIARRYLQRYFIIDFLSVVPIPQIVVWRFLQTSKSSDVLATKRALFFVI LLQYVPRFLRMVPLTSELKRTAGVFAETAWAGAAYYLLLYMLASHIVGAFWYLLAIERNDSCWQKACSENGCNQNFLYCG SEHADGYTAWQNRSEAILKSKCSADVDPPPFDYGIFEQALSSGIISSKKFVSKYCYCLWWGLQNLSTLGQGLQTSTYPWE VIFSITLAIFGLILFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRLLPPELRERVRRYDQYKWLATRGVDEDCLV QSLPKDLRRDIKRHLCLALVRRVPLFESMDERLLDAICERLKPSLFTEHTYIVREGDPVDEMLFIIRGRLESVTTDGGRS GFFNRGFLKEADFCGEELLTWALDPRSGSNLPTSTRTVKALTEVEAFALTADELKFVASQFRRLHSRQVQHTFRFYSQQW RTWAACFIQAAWRRYCKKKILKLRQKEEADESEGTHDNASGISSSLGATLLASKFAARTLRGVHRNRLAKTARELVKLQK PPEPDFTADDAD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 104 | 104 | - | – | |
| PANTHER | 13 | 729 | 717 | 0.0 | – | |
| PANTHER | 13 | 729 | 717 | 0.0 | – | |
| SUPERFAMILY | 101 | 427 | 327 | 1.83E-35 | – | |
| Phobius | 105 | 128 | 24 | - | – | |
| TMHMM | 106 | 128 | 23 | - | – | |
| Pfam | 109 | 431 | 323 | 7.9E-35 | ||
| Phobius | 129 | 200 | 72 | - | – | |
| Phobius | 201 | 221 | 21 | - | – | |
| TMHMM | 201 | 223 | 23 | - | – | |
| Phobius | 222 | 232 | 11 | - | – | |
| Phobius | 233 | 253 | 21 | - | – | |
| TMHMM | 235 | 254 | 20 | - | – | |
| Phobius | 254 | 272 | 19 | - | – | |
| Phobius | 273 | 295 | 23 | - | – | |
| TMHMM | 274 | 296 | 23 | - | – | |
| Phobius | 296 | 400 | 105 | - | – | |
| Phobius | 401 | 420 | 20 | - | – | |
| TMHMM | 401 | 423 | 23 | - | – | |
| Phobius | 421 | 732 | 312 | - | – | |
| Gene3D | 432 | 496 | 65 | 4.0E-13 | – | |
| SUPERFAMILY | 434 | 625 | 192 | 1.76E-34 | ||
| Gene3D | 503 | 623 | 121 | 9.0E-43 | ||
| CDD | 505 | 636 | 132 | 1.33625E-19 | ||
| ProSiteProfiles | 505 | 589 | 85 | 13.939 | ||
| SMART | 505 | 636 | 132 | 1.9E-13 | ||
| Pfam | 526 | 616 | 91 | 3.0E-8 | ||
| MobiDBLite | 713 | 732 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Ion channel activity | Enables the facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism. May be either selective (it enables passage of a specific ion only) or non-selective (it enables passage of two or more ions of same charge but different size). | ||
| Biological process | Ion transport | The directed movement of charged atoms or small charged molecules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi4g1v0288200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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